RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 PHOSPHO1Q8TCT1 267 aa10.96□□□□□ -0.66
PTCH1-205ENST00000418258 WDR77Q9BQA1 342 aaPredicted RBP10.96□□□□□ -0.66
PTCH1-205ENST00000418258 ZCCHC3Q9NUD5 404 aaKnown RBP10.96□□□□□ -0.66
PTCH1-205ENST00000418258 KDM4FA0A1W2PPD8 638 aa10.96□□□□□ -0.66
PTCH1-205ENST00000418258 MID1O15344 667 aa10.96□□□□□ -0.66
PTCH1-205ENST00000418258 BMP6P22004 513 aa10.96□□□□□ -0.66
PTCH1-205ENST00000418258 S100A1P23297 94 aa10.96□□□□□ -0.66
PTCH1-205ENST00000418258 ARF3P61204 181 aaPredicted RBP10.96□□□□□ -0.66
PTCH1-205ENST00000418258 ARF1P84077 181 aaKnown RBP10.96□□□□□ -0.66
PTCH1-205ENST00000418258 PITPNAQ00169 270 aa10.96□□□□□ -0.66
PTCH1-205ENST00000418258 CRB2Q5IJ48 1285 aa10.96□□□□□ -0.66
PTCH1-205ENST00000418258 PAOXQ6QHF9 649 aa10.96□□□□□ -0.66
PTCH1-205ENST00000418258 ZNF676Q8N7Q3 588 aa10.96□□□□□ -0.66
PTCH1-205ENST00000418258 KCTD13Q8WZ19 329 aa10.96□□□□□ -0.66
PTCH1-205ENST00000418258 TFAP2BQ92481 460 aa10.96□□□□□ -0.66
PTCH1-205ENST00000418258 NXPE2Q96DL1 559 aa10.96□□□□□ -0.66
PTCH1-205ENST00000418258 EPYCQ99645 322 aa10.96□□□□□ -0.66
PTCH1-205ENST00000418258 C5orf51A6NDU8 294 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 ZNF878C9JN71 531 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 E7ENX8 843 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 KAT7O95251 611 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 PGRP06401 933 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 ZNF806P0C7X5 589 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 CSNK2A2P19784 350 aaPredicted RBP10.95□□□□□ -0.66
PTCH1-205ENST00000418258 SCNN1AP37088 669 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 ASPAP45381 313 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 RPL5P46777 297 aaKnown RBP10.95□□□□□ -0.66
PTCH1-205ENST00000418258 LYSMD3Q7Z3D4 306 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 SLC51AQ86UW1 340 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 CNTD1Q8N815 330 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 THEM6Q8WUY1 208 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 SDCBP2Q9H190 292 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 RBM47A0AV96 593 aaKnown RBP10.95□□□□□ -0.66
PTCH1-205ENST00000418258 JUNP05412 331 aaKnown RBP10.95□□□□□ -0.66
PTCH1-205ENST00000418258 HLA-DQB2P05538 268 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 CRTC2Q53ET0 693 aaPredicted RBP10.95□□□□□ -0.66
PTCH1-205ENST00000418258 GPAT4Q86UL3 456 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 TREML1Q86YW5 311 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 KLHDC7BQ96G42 594 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 CCDC28BQ9BUN5 200 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 ARL8BQ9NVJ2 186 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 UPK3BL1B0FP48 263 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 UPK3BL2E5RIL1 263 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 NOBOXO60393 691 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 XKP51811 444 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 CLEC20AQ6ZU45 233 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 METTL27Q8N6F8 245 aaPredicted RBP10.95□□□□□ -0.66
PTCH1-205ENST00000418258 OR13C4Q8NGS5 318 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 CMTM7Q96FZ5 175 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 PSKH2Q96QS6 385 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 SMPD3Q9NY59 655 aaPredicted RBP10.95□□□□□ -0.66
PTCH1-205ENST00000418258 SLC22A14Q9Y267 594 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 TCRBV21S2A2A0A5A6 115 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 OR51F1A6NGY5 319 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 FAM227AF5H4B4 570 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 H3BSH0 61 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 H3BUI4 141 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 SLC7A4O43246 635 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 RPL19P84098 196 aaKnown RBP10.95□□□□□ -0.66
PTCH1-205ENST00000418258 ECH1Q13011 328 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 SH3PXD2AQ5TCZ1 1133 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 ASPNQ9BXN1 380 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 METTL8Q9H825 291 aaKnown RBP10.95□□□□□ -0.66
PTCH1-205ENST00000418258 SHOX2O60902 331 aaPredicted RBP10.95□□□□□ -0.66
PTCH1-205ENST00000418258 TSPAN9O75954 239 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 SYNGR4O95473 234 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 CLRN1P58418 232 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 KLF1Q13351 362 aaPredicted RBP10.95□□□□□ -0.66
PTCH1-205ENST00000418258 OCLNQ16625 522 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 TMEM17Q86X19 198 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 ZDHHC12Q96GR4 267 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 ORAI3Q9BRQ5 295 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 COPS4Q9BT78 406 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 S100A14Q9HCY8 104 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 ENY2Q9NPA8 101 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 CA14Q9ULX7 337 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 CYP8B1Q9UNU6 501 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 EIF2S3P41091 472 aaKnown RBP10.95□□□□□ -0.66
PTCH1-205ENST00000418258 SVOPLQ8N434 492 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 PDPRQ8NCN5 879 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 PLEKHA6Q9Y2H5 1048 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 LMO7Q8WWI1 1683 aa10.95□□□□□ -0.66
PTCH1-205ENST00000418258 RPP14O95059 124 aaKnown RBP10.94□□□□□ -0.66
PTCH1-205ENST00000418258 CLDN7O95471 211 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 GPR33Q49SQ1 333 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 TAS2R7Q9NYW3 318 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 PLCL2Q9UPR0 1127 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 CAMTA1Q9Y6Y1 1673 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 SLC33A1O00400 549 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-205ENST00000418258 WNT7AO00755 349 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 EDF1O60869 148 aaKnown RBP10.94□□□□□ -0.66
PTCH1-205ENST00000418258 PFKMP08237 780 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 CHRM5P08912 532 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-205ENST00000418258 GP1BBP13224 206 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 HLA-EP13747 358 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 ZNF16P17020 682 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-205ENST00000418258 OR12D2P58182 307 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 MYLK3Q32MK0 819 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 KIAA1161Q6NSJ0 714 aa10.94□□□□□ -0.66
PTCH1-205ENST00000418258 MREGQ8N565 214 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms