RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 KIR3DX1Q9H7L2 352 aa20.08■□□□□ 0.81
CASC3-203ENST00000418132 ZNF624Q9P2J8 865 aaPredicted RBP20.08■□□□□ 0.81
CASC3-203ENST00000418132 SH2B3Q9UQQ2 575 aa20.08■□□□□ 0.81
CASC3-203ENST00000418132 SERTM1A2A2V5 107 aa20.08■□□□□ 0.8
CASC3-203ENST00000418132 H0YIV9 168 aa20.08■□□□□ 0.8
CASC3-203ENST00000418132 TLR4O00206 839 aa20.08■□□□□ 0.8
CASC3-203ENST00000418132 LSM1O15116 133 aaKnown RBP20.08■□□□□ 0.8
CASC3-203ENST00000418132 RGS14O43566 566 aa20.08■□□□□ 0.8
CASC3-203ENST00000418132 PDYNP01213 254 aa20.08■□□□□ 0.8
CASC3-203ENST00000418132 ATP6AP1LQ52LC2 224 aa20.08■□□□□ 0.8
CASC3-203ENST00000418132 THEMIS2Q5TEJ8 643 aa20.08■□□□□ 0.8
CASC3-203ENST00000418132 FRG2Q64ET8 278 aa20.08■□□□□ 0.8
CASC3-203ENST00000418132 ATG9BQ674R7 924 aa20.08■□□□□ 0.8
CASC3-203ENST00000418132 LAYNQ6UX15 382 aa20.08■□□□□ 0.8
CASC3-203ENST00000418132 LPCAT2Q7L5N7 544 aa20.08■□□□□ 0.8
CASC3-203ENST00000418132 C2orf73Q8N5S3 287 aaPredicted RBP20.08■□□□□ 0.8
CASC3-203ENST00000418132 OR2L8Q8NGY9 312 aa20.08■□□□□ 0.8
CASC3-203ENST00000418132 SLC5A11Q8WWX8 675 aa20.08■□□□□ 0.8
CASC3-203ENST00000418132 SELENOMQ8WWX9 145 aa20.08■□□□□ 0.8
CASC3-203ENST00000418132 CMTM5Q96DZ9 223 aa20.08■□□□□ 0.8
CASC3-203ENST00000418132 FRG2BQ96QU4 278 aa20.08■□□□□ 0.8
CASC3-203ENST00000418132 PCBD2Q9H0N5 130 aa20.08■□□□□ 0.8
CASC3-203ENST00000418132 PCM1Q15154 2024 aa20.07■□□□□ 0.8
CASC3-203ENST00000418132 PRAMEF33A0A0G2JMD5 474 aa20.07■□□□□ 0.8
CASC3-203ENST00000418132 A0A1W2PPV9 198 aa20.07■□□□□ 0.8
CASC3-203ENST00000418132 KDM1AO60341 852 aa20.07■□□□□ 0.8
CASC3-203ENST00000418132 C1GALT1C1LP0DN25 315 aa20.07■□□□□ 0.8
CASC3-203ENST00000418132 SLC19A1P41440 591 aa20.07■□□□□ 0.8
CASC3-203ENST00000418132 FNTBP49356 437 aa20.07■□□□□ 0.8
CASC3-203ENST00000418132 MNAT1P51948 309 aa20.07■□□□□ 0.8
CASC3-203ENST00000418132 ERVK-8P63133 956 aa20.07■□□□□ 0.8
CASC3-203ENST00000418132 SGO1Q5FBB7 561 aa20.07■□□□□ 0.8
CASC3-203ENST00000418132 TMPRSS11BQ86T26 416 aa20.07■□□□□ 0.8
CASC3-203ENST00000418132 WDR5BQ86VZ2 330 aa20.07■□□□□ 0.8
CASC3-203ENST00000418132 WDR20Q8TBZ3 569 aa20.07■□□□□ 0.8
CASC3-203ENST00000418132 BTBD10Q9BSF8 475 aa20.07■□□□□ 0.8
CASC3-203ENST00000418132 TAAR2Q9P1P5 351 aa20.07■□□□□ 0.8
CASC3-203ENST00000418132 ICKQ9UPZ9 632 aa20.07■□□□□ 0.8
CASC3-203ENST00000418132 CSF2P04141 144 aa20.06■□□□□ 0.8
CASC3-203ENST00000418132 CTSEP14091 401 aa20.06■□□□□ 0.8
CASC3-203ENST00000418132 VARSP26640 1264 aaKnown RBP20.06■□□□□ 0.8
CASC3-203ENST00000418132 NR6A1Q15406 480 aa20.06■□□□□ 0.8
CASC3-203ENST00000418132 CATSPEREQ5SY80 951 aa20.06■□□□□ 0.8
CASC3-203ENST00000418132 IYDQ6PHW0 289 aa20.06■□□□□ 0.8
CASC3-203ENST00000418132 PPP3R2Q96LZ3 170 aa20.06■□□□□ 0.8
CASC3-203ENST00000418132 EFCAB11Q9BUY7 163 aa20.06■□□□□ 0.8
CASC3-203ENST00000418132 APOBEC3BQ9UH17 382 aaKnown RBP20.06■□□□□ 0.8
CASC3-203ENST00000418132 PCDHGA11Q9Y5H2 935 aa20.06■□□□□ 0.8
CASC3-203ENST00000418132 ARHGEF17Q96PE2 2063 aaPredicted RBP20.06■□□□□ 0.8
CASC3-203ENST00000418132 KNL1Q8NG31 2342 aa20.06■□□□□ 0.8
CASC3-203ENST00000418132 CELA2BP08218 269 aaPredicted RBP20.06■□□□□ 0.8
CASC3-203ENST00000418132 JUNDP17535 347 aa20.06■□□□□ 0.8
CASC3-203ENST00000418132 MRPL19P49406 292 aaKnown RBP20.06■□□□□ 0.8
CASC3-203ENST00000418132 NEK2P51955 445 aa20.06■□□□□ 0.8
CASC3-203ENST00000418132 GSTA3Q16772 222 aa20.06■□□□□ 0.8
CASC3-203ENST00000418132 SMU1Q2TAY7 513 aa20.06■□□□□ 0.8
CASC3-203ENST00000418132 WDR45BQ5MNZ6 344 aa20.06■□□□□ 0.8
CASC3-203ENST00000418132 NXPE4Q6UWF7 544 aa20.06■□□□□ 0.8
CASC3-203ENST00000418132 RINLQ6ZS11 566 aa20.06■□□□□ 0.8
CASC3-203ENST00000418132 POU5F2Q8N7G0 328 aa20.06■□□□□ 0.8
CASC3-203ENST00000418132 CXorf40BQ96DE9 158 aa20.06■□□□□ 0.8
CASC3-203ENST00000418132 MTFMTQ96DP5 389 aaKnown RBP20.06■□□□□ 0.8
CASC3-203ENST00000418132 ACPTQ9BZG2 426 aa20.06■□□□□ 0.8
CASC3-203ENST00000418132 XKR8Q9H6D3 395 aa20.06■□□□□ 0.8
CASC3-203ENST00000418132 TAC3Q9UHF0 121 aa20.06■□□□□ 0.8
CASC3-203ENST00000418132 NPIPB8E9PQR5 432 aa20.05■□□□□ 0.8
CASC3-203ENST00000418132 LAMTOR5O43504 91 aa20.05■□□□□ 0.8
CASC3-203ENST00000418132 COX4I1P13073 169 aa20.05■□□□□ 0.8
CASC3-203ENST00000418132 IDO1P14902 403 aa20.05■□□□□ 0.8
CASC3-203ENST00000418132 NME1P15531 152 aaKnown RBP20.05■□□□□ 0.8
CASC3-203ENST00000418132 CD1EP15812 388 aa20.05■□□□□ 0.8
CASC3-203ENST00000418132 STX1BP61266 288 aa20.05■□□□□ 0.8
CASC3-203ENST00000418132 HERC3Q15034 1050 aa20.05■□□□□ 0.8
CASC3-203ENST00000418132 AP5B1Q2VPB7 878 aa20.05■□□□□ 0.8
CASC3-203ENST00000418132 SH3KBP1Q96B97 665 aa20.05■□□□□ 0.8
CASC3-203ENST00000418132 LRRC61Q9BV99 259 aa20.05■□□□□ 0.8
CASC3-203ENST00000418132 CADM1Q9BY67 442 aaKnown RBP20.05■□□□□ 0.8
CASC3-203ENST00000418132 AIG1Q9NVV5 245 aa20.05■□□□□ 0.8
CASC3-203ENST00000418132 GPR45Q9Y5Y3 372 aa20.05■□□□□ 0.8
CASC3-203ENST00000418132 PSMD12O00232 456 aaPredicted RBP20.04■□□□□ 0.8
CASC3-203ENST00000418132 THRAP10827 490 aa20.04■□□□□ 0.8
CASC3-203ENST00000418132 CPA2P48052 419 aa20.04■□□□□ 0.8
CASC3-203ENST00000418132 ACADVLP49748 655 aa20.04■□□□□ 0.8
CASC3-203ENST00000418132 DIO3P55073 304 aa20.04■□□□□ 0.8
CASC3-203ENST00000418132 NXPH1P58417 271 aa20.04■□□□□ 0.8
CASC3-203ENST00000418132 HMGCS1Q01581 520 aa20.04■□□□□ 0.8
CASC3-203ENST00000418132 EMX2Q04743 252 aa20.04■□□□□ 0.8
CASC3-203ENST00000418132 IMPG1Q17R60 797 aa20.04■□□□□ 0.8
CASC3-203ENST00000418132 TJAP1Q5JTD0 557 aa20.04■□□□□ 0.8
CASC3-203ENST00000418132 TAF8Q7Z7C8 310 aa20.04■□□□□ 0.8
CASC3-203ENST00000418132 C17orf64Q86WR6 236 aa20.04■□□□□ 0.8
CASC3-203ENST00000418132 FNDC5Q8NAU1 212 aa20.04■□□□□ 0.8
CASC3-203ENST00000418132 FAM13CQ8NE31 585 aa20.04■□□□□ 0.8
CASC3-203ENST00000418132 RP9Q8TA86 221 aaKnown RBP20.04■□□□□ 0.8
CASC3-203ENST00000418132 ACAT2Q9BWD1 397 aa20.04■□□□□ 0.8
CASC3-203ENST00000418132 SDR39U1Q9NRG7 319 aaPredicted RBP20.04■□□□□ 0.8
CASC3-203ENST00000418132 GEMIN8Q9NWZ8 242 aaKnown RBP20.04■□□□□ 0.8
CASC3-203ENST00000418132 TAS2R1Q9NYW7 299 aa20.04■□□□□ 0.8
CASC3-203ENST00000418132 LOC100653049A0A140TA62 436 aa20.04■□□□□ 0.8
CASC3-203ENST00000418132 OR5K4A6NMS3 321 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms