RNA–Protein interactions for RNA: ENST00000417833.2

TGFBR3-203, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-203ENST00000417833 KCNAB1Q14722 419 aa12.75□□□□□ -0.37
TGFBR3-203ENST00000417833 SDK2Q58EX2 2172 aa12.75□□□□□ -0.37
TGFBR3-203ENST00000417833 PIWIL4Q7Z3Z4 852 aaKnown RBP12.75□□□□□ -0.37
TGFBR3-203ENST00000417833 MYO1HQ8N1T3 1032 aa12.75□□□□□ -0.37
TGFBR3-203ENST00000417833 LMNTD1Q8N9Z9 388 aa12.75□□□□□ -0.37
TGFBR3-203ENST00000417833 DCAKDQ8WVC6 231 aa12.75□□□□□ -0.37
TGFBR3-203ENST00000417833 SNRNP27Q8WVK2 155 aaKnown RBP12.75□□□□□ -0.37
TGFBR3-203ENST00000417833 NKD1Q969G9 470 aa12.75□□□□□ -0.37
TGFBR3-203ENST00000417833 ZUFSPQ96AP4 578 aa12.75□□□□□ -0.37
TGFBR3-203ENST00000417833 ALKBH8Q96BT7 664 aaKnown RBP12.75□□□□□ -0.37
TGFBR3-203ENST00000417833 NAF1Q96HR8 494 aaKnown RBP12.75□□□□□ -0.37
TGFBR3-203ENST00000417833 VPS39Q96JC1 886 aa12.75□□□□□ -0.37
TGFBR3-203ENST00000417833 IL17FQ96PD4 163 aa12.75□□□□□ -0.37
TGFBR3-203ENST00000417833 PKP4Q99569 1192 aa12.75□□□□□ -0.37
TGFBR3-203ENST00000417833 OLFM1Q99784 485 aa12.75□□□□□ -0.37
TGFBR3-203ENST00000417833 SOHLH2Q9NX45 425 aa12.75□□□□□ -0.37
TGFBR3-203ENST00000417833 TXNDC16Q9P2K2 825 aa12.75□□□□□ -0.37
TGFBR3-203ENST00000417833 TBK1Q9UHD2 729 aa12.75□□□□□ -0.37
TGFBR3-203ENST00000417833 ADAM21Q9UKJ8 722 aa12.75□□□□□ -0.37
TGFBR3-203ENST00000417833 PTPRQQ9UMZ3 2332 aa12.75□□□□□ -0.37
TGFBR3-203ENST00000417833 A0A1W2PPV9 198 aa12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 MT-ND3P03897 115 aa12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 SNRPAP09012 282 aaKnown RBP12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 PVRP15151 417 aa12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 GABRA4P48169 554 aa12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 TAS2R39P59534 338 aa12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 EFTUD2Q15029 972 aaKnown RBP eCLIP12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 TGIF1Q15583 401 aa12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 GRTP1Q5TC63 336 aa12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 UBE2R2Q712K3 238 aaPredicted RBP12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 TIPARPQ7Z3E1 657 aaKnown RBP12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 TRABD2AQ86V40 505 aa12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 EXOC3L1Q86VI1 746 aa12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 NLGN4XQ8N0W4 816 aa12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 ZNF843Q8N446 348 aa12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 DNAJC22Q8N4W6 341 aa12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 NKAPQ8N5F7 415 aaKnown RBP12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 C19orf47Q8N9M1 422 aaKnown RBP12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 NLGN4YQ8NFZ3 816 aaPredicted RBP12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 OR2A1Q8NGT9 310 aa12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 MCOLN3Q8TDD5 553 aa12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 SMPDL3AQ92484 453 aa12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 LINGO1Q96FE5 620 aa12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 ELMO2Q96JJ3 720 aa12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 CCDC138Q96M89 665 aa12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 CCNL2Q96S94 520 aaPredicted RBP12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 RBBP8Q99708 897 aa12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 FANCEQ9HB96 536 aa12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 PARVBQ9HBI1 364 aa12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 SSU72Q9NP77 194 aaKnown RBP12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 ENAMQ9NRM1 1142 aa12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 INTS7Q9NVH2 962 aaKnown RBP12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 CTNNAL1Q9UBT7 734 aa12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 CIDEBQ9UHD4 219 aa12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 SERTAD3Q9UJW9 196 aa12.74□□□□□ -0.37
TGFBR3-203ENST00000417833 E7ENX8 843 aa12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 RAD1O60671 282 aa12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 WISP3O95389 354 aaPredicted RBP12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 SLC16A8O95907 504 aa12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 ENO2P09104 434 aaPredicted RBP12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 ZNF37AP17032 561 aaPredicted RBP12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 ZNF28P17035 718 aa12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 CYP2A7P20853 494 aa12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 SPRP35270 261 aaPredicted RBP12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 ATP1A2P50993 1020 aa12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 PNLIPRP1P54315 467 aa12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 TMPRSS3P57727 454 aa12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 TAP2Q03519 686 aa12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 ABHD18Q0P651 414 aa12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 NAA25Q14CX7 972 aa12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 SF1Q15637 639 aaKnown RBP12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 GPR19Q15760 415 aa12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 ZIC1Q15915 447 aa12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 PWWP2BQ6NUJ5 590 aa12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 TMEM207Q6UWW9 146 aa12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 CDHR3Q6ZTQ4 885 aa12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 TRIM73Q86UV7 250 aa12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 SRRM1Q8IYB3 904 aaKnown RBP12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 LRRC56Q8IYG6 542 aaPredicted RBP12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 CACNA2D3Q8IZS8 1091 aa12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 C2orf73Q8N5S3 287 aaPredicted RBP12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 ESX1Q8N693 406 aa12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 ZNF480Q8WV37 535 aa12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 DLG3Q92796 817 aa12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 MRRFQ96E11 262 aaKnown RBP12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 TSPAN17Q96FV3 270 aa12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 CRELD1Q96HD1 420 aa12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 LRFN5Q96NI6 719 aa12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 SMC6Q96SB8 1091 aa12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 GPR22Q99680 433 aa12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 ULBP3Q9BZM4 244 aa12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 PRORYQ9H606 182 aa12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 FAM60AQ9NP50 221 aa12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 PSD3Q9NYI0 1048 aa12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 TSR3Q9UJK0 312 aaKnown RBP12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 ADAMTS6Q9UKP5 1117 aa12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 PDE10AQ9Y233 779 aa12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 MTO1Q9Y2Z2 717 aaKnown RBP12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 PCDHB3Q9Y5E6 796 aa12.73□□□□□ -0.37
TGFBR3-203ENST00000417833 PCM1Q15154 2024 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms