RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 NFU1Q9UMS0 254 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 DAPP1Q9UN19 280 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 PLA2G4CQ9UP65 541 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 HS3ST2Q9Y278 367 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 SNX24Q9Y343 169 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 PIAS3Q9Y6X2 628 aa5.84□□□□□ -1.47
NIFKP3-201ENST00000417799 CHD5Q8TDI0 1954 aa5.84□□□□□ -1.48
NIFKP3-201ENST00000417799 MYO10Q9HD67 2058 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 FAM90A18PA6NE21 464 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 FAM90A16PA6NEW6 464 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 FAM90A9PA6NNJ1 464 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 FAM90A5PA8MXJ8 464 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 H0YIZ8 118 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 DNALI1O14645 258 aaPredicted RBP5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 NDC80O14777 642 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 PSMD3O43242 534 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 SMAD6O43541 496 aaKnown RBP5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 ZNF821O75541 412 aaPredicted RBP5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 FAM155BO75949 473 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 ANXA9O76027 345 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 SEC31AO94979 1220 aaKnown RBP5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 METTL18O95568 372 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 GSRP00390 522 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 SRPRAP08240 638 aaKnown RBP5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 NPSP0C0P6 89 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 ELFN1P0C7U0 828 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 FAM90A15PP0C7V4 464 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 FAM90A14PP0C7W9 464 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 SRCP12931 536 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 PSMB4P28070 264 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 NNMTP40261 264 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 MAGEA6P43360 314 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 TNFRSF4P43489 277 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 RGRP47804 291 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 CSNK1DP48730 415 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 STK19P49842 368 aaPredicted RBP5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 EEFSECP57772 596 aaKnown RBP5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 MAXP61244 160 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 RHOAP61586 193 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 ST8SIA6P61647 398 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 BASP1P80723 227 aaKnown RBP5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 NIPAL4Q0D2K0 466 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 GRSF1Q12849 480 aaKnown RBP eCLIP5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 CALCOCO2Q13137 446 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 CUL1Q13616 776 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 PRPSAP1Q14558 356 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 KCNJ11Q14654 390 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 PUM1Q14671 1186 aaKnown RBP eCLIP5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 ZNF169Q14929 603 aaPredicted RBP5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 PON2Q15165 354 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 E2F5Q15329 346 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 TRADDQ15628 312 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 DLG2Q15700 870 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 ACCSLQ4AC99 568 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 DENND2CQ68D51 928 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 PCGF5Q86SE9 256 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 PRPF39Q86UA1 669 aaKnown RBP5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 SFTPA1Q8IWL2 248 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 PCDH20Q8N6Y1 951 aaKnown RBP5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 ARRDC2Q8TBH0 407 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 SORCS1Q8WY21 1168 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 IFT81Q8WYA0 676 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 CPT1BQ92523 772 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 C3orf49Q96BT1 292 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 IMP4Q96G21 291 aaKnown RBP5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 MSANTD3Q96H12 275 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 PPP1R2P1Q96PQ5 205 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 LENG8Q96PV6 779 aaPredicted RBP5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 ASB2Q96Q27 587 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 FCRL5Q96RD9 977 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 MGME1Q9BQP7 344 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 MLPHQ9BV36 600 aaPredicted RBP5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 FSD1LQ9BXM9 530 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 POLR1EQ9GZS1 481 aaKnown RBP5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 SLC25A51Q9H1U9 297 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 FBRSL1Q9HCM7 1045 aaKnown RBP5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 SEPSECSQ9HD40 501 aaKnown RBP5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 SNX15Q9NRS6 342 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 RXFP3Q9NSD7 469 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 GRHL1Q9NZI5 618 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 FOXJ2Q9P0K8 574 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 THAP10Q9P2Z0 257 aaPredicted RBP5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 LHX3Q9UBR4 397 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 ANAPC5Q9UJX4 755 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 DUSP12Q9UNI6 340 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 GTF2A1LQ9UNN4 478 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 C19orf53Q9UNZ5 99 aaPredicted RBP5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 SLC8A2Q9UPR5 921 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 AAR2Q9Y312 384 aaKnown RBP5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 TTLL3Q9Y4R7 772 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 F5P12259 2224 aa5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 NYNRINQ9P2P1 1898 aaKnown RBP5.83□□□□□ -1.48
NIFKP3-201ENST00000417799 TCRBV7S3A2A0A539 114 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 SHISA7A6NL88 538 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 ERI2A8K979 691 aaKnown RBP5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 TTC34A8MYJ7 566 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 E7EVH7 732 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 H0Y3Z8 333 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 K7EQS6 105 aa5.82□□□□□ -1.48
NIFKP3-201ENST00000417799 TP73O15350 636 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms