RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 TMEM53Q6P2H8 277 aa11.77□□□□□ -0.53
UBR4-205ENST00000417040 ZNF773Q6PK81 442 aa11.77□□□□□ -0.53
UBR4-205ENST00000417040 KCTD9Q7L273 389 aa11.77□□□□□ -0.53
UBR4-205ENST00000417040 GOLGA7Q7Z5G4 137 aa11.77□□□□□ -0.53
UBR4-205ENST00000417040 PPTC7Q8NI37 304 aa11.77□□□□□ -0.53
UBR4-205ENST00000417040 C1orf216Q8TAB5 229 aa11.77□□□□□ -0.53
UBR4-205ENST00000417040 A0A1B0GVG6 124 aa11.77□□□□□ -0.53
UBR4-205ENST00000417040 TLX2O43763 284 aaPredicted RBP11.77□□□□□ -0.53
UBR4-205ENST00000417040 ERN1O75460 977 aaKnown RBP11.77□□□□□ -0.53
UBR4-205ENST00000417040 LYPLA2O95372 231 aa11.77□□□□□ -0.53
UBR4-205ENST00000417040 VIPP01282 170 aa11.77□□□□□ -0.53
UBR4-205ENST00000417040 ATXN7L3Q14CW9 347 aaPredicted RBP11.77□□□□□ -0.53
UBR4-205ENST00000417040 GPR68Q15743 365 aa11.77□□□□□ -0.53
UBR4-205ENST00000417040 PRSS58Q8IYP2 241 aa11.77□□□□□ -0.53
UBR4-205ENST00000417040 ENDOVQ8N8Q3 282 aaKnown RBP11.77□□□□□ -0.53
UBR4-205ENST00000417040 SLC35B2Q8TB61 432 aa11.77□□□□□ -0.53
UBR4-205ENST00000417040 COL21A1Q96P44 957 aa11.77□□□□□ -0.53
UBR4-205ENST00000417040 OXCT2Q9BYC2 517 aaPredicted RBP11.77□□□□□ -0.53
UBR4-205ENST00000417040 ERVK-18Q9QC07 812 aa11.77□□□□□ -0.53
UBR4-205ENST00000417040 MROH1Q8NDA8 1641 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 J3KR12 359 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 CTNNB1P35222 781 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 NR4A2P43354 598 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 CD97P48960 835 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 KHKP50053 298 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 PSMA6P60900 246 aaKnown RBP11.76□□□□□ -0.53
UBR4-205ENST00000417040 MLLT1Q03111 559 aaPredicted RBP11.76□□□□□ -0.53
UBR4-205ENST00000417040 LRRC37A5PQ49AS3 106 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 RFTN2Q52LD8 501 aaPredicted RBP11.76□□□□□ -0.53
UBR4-205ENST00000417040 UBXN11Q5T124 520 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 OR5J2Q8NH18 312 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 SLC25A36Q96CQ1 311 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 SNX27Q96L92 541 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 CFL2Q9Y281 166 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 PCDHGB3Q9Y5G1 929 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 TEX264Q9Y6I9 313 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 MYO5BQ9ULV0 1848 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 OR1I1O60431 355 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 BCAS2O75934 225 aaPredicted RBP11.76□□□□□ -0.53
UBR4-205ENST00000417040 RPL17P18621 184 aaKnown RBP11.76□□□□□ -0.53
UBR4-205ENST00000417040 SLC6A4P31645 630 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 DGLUCYQ7Z3D6 616 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 OR4F6Q8NGB9 312 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 OR5T3Q8NGG3 340 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 SOCS4Q8WXH5 440 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 FUZQ9BT04 418 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 ERVK13-1Q9NX77 482 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 FBXL21Q9UKT6 434 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 MGAT4AQ9UM21 535 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 K7EPI3 171 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 CACNB4O00305 520 aaPredicted RBP11.76□□□□□ -0.53
UBR4-205ENST00000417040 FBP2O00757 339 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 CXCL14O95715 111 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 C8BP07358 591 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 DLDP09622 509 aaKnown RBP11.76□□□□□ -0.53
UBR4-205ENST00000417040 AGTR2P50052 363 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 DAOAP59103 153 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 TUBA3EQ6PEY2 450 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 HMGN2P46Q86SG4 172 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 TRPM4Q8TD43 1214 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 ZSWIM3Q96MP5 696 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 PCDHA2Q9Y5H9 948 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 CFAP20Q9Y6A4 193 aaKnown RBP11.76□□□□□ -0.53
UBR4-205ENST00000417040 MST1RQ04912 1400 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 CREG1O75629 220 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 ARCN1P48444 511 aaKnown RBP11.76□□□□□ -0.53
UBR4-205ENST00000417040 SLC9A3P48764 834 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 GPR151Q8TDV0 419 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 GATAD2BQ8WXI9 593 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 ZNF285Q96NJ3 590 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 TRIM2Q9C040 744 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 FARSBQ9NSD9 589 aaKnown RBP11.76□□□□□ -0.53
UBR4-205ENST00000417040 DMAC2Q9NW81 257 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 THUMPD1Q9NXG2 353 aaKnown RBP11.76□□□□□ -0.53
UBR4-205ENST00000417040 PSAT1Q9Y617 370 aa11.76□□□□□ -0.53
UBR4-205ENST00000417040 SOCS2O14508 198 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 FANCGO15287 622 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 REM1O75628 298 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 HTR1BP28222 390 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 BDKRB1P46663 353 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 NDST2P52849 883 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 SEMA3AQ14563 771 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 ZCCHC12Q6PEW1 402 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 HSDL2Q6YN16 418 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 POGLUT1Q8NBL1 392 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 KLHL6Q8WZ60 621 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 FAM83DQ9H4H8 585 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 KLF15Q9UIH9 416 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 MAFBQ9Y5Q3 323 aaPredicted RBP11.75□□□□□ -0.53
UBR4-205ENST00000417040 A0A1W2PPK0 400 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 TRBC2A0A5B9 178 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 L7N2F9 121 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 M0QX08 132 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 ZNF81P51508 661 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 GBX2P52951 348 aaPredicted RBP11.75□□□□□ -0.53
UBR4-205ENST00000417040 MPP2Q14168 576 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 XKR4Q5GH76 650 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 TMPRSS9Q7Z410 1059 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 COX18Q8N8Q8 333 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 TTPALQ9BTX7 342 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms