RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 RPS6KA2Q15349 733 aa4.85□□□□□ -1.63
CSTF1-202ENST00000415828 IMMTQ16891 758 aaKnown RBP4.85□□□□□ -1.63
CSTF1-202ENST00000415828 CFAP221Q4G0U5 840 aa4.85□□□□□ -1.63
CSTF1-202ENST00000415828 CCDC38Q502W7 563 aa4.85□□□□□ -1.63
CSTF1-202ENST00000415828 HECTD3Q5T447 861 aa4.85□□□□□ -1.63
CSTF1-202ENST00000415828 DCAF12Q5T6F0 453 aa4.85□□□□□ -1.63
CSTF1-202ENST00000415828 C9orf64Q5T6V5 341 aa4.85□□□□□ -1.63
CSTF1-202ENST00000415828 XKRXQ6PP77 449 aa4.85□□□□□ -1.63
CSTF1-202ENST00000415828 ABI3BPQ7Z7G0 1075 aa4.85□□□□□ -1.63
CSTF1-202ENST00000415828 CHD1LQ86WJ1 897 aa4.85□□□□□ -1.63
CSTF1-202ENST00000415828 TRIM69Q86WT6 500 aa4.85□□□□□ -1.63
CSTF1-202ENST00000415828 ZNF354CQ86Y25 554 aa4.85□□□□□ -1.63
CSTF1-202ENST00000415828 SPATA2LQ8IUW3 424 aaPredicted RBP4.85□□□□□ -1.63
CSTF1-202ENST00000415828 CCDC117Q8IWD4 279 aaPredicted RBP4.85□□□□□ -1.63
CSTF1-202ENST00000415828 ARL10Q8N8L6 244 aa4.85□□□□□ -1.63
CSTF1-202ENST00000415828 ADPRHL1Q8NDY3 354 aa4.85□□□□□ -1.63
CSTF1-202ENST00000415828 ZBTB9Q96C00 473 aa4.85□□□□□ -1.63
CSTF1-202ENST00000415828 HMCESQ96FZ2 354 aa4.85□□□□□ -1.63
CSTF1-202ENST00000415828 ZNF48Q96MX3 618 aaPredicted RBP4.85□□□□□ -1.63
CSTF1-202ENST00000415828 DDX50Q9BQ39 737 aaKnown RBP4.85□□□□□ -1.63
CSTF1-202ENST00000415828 ILKAPQ9H0C8 392 aaPredicted RBP4.85□□□□□ -1.63
CSTF1-202ENST00000415828 C2orf40Q9H1Z8 148 aa4.85□□□□□ -1.63
CSTF1-202ENST00000415828 FOXP1Q9H334 677 aaPredicted RBP4.85□□□□□ -1.63
CSTF1-202ENST00000415828 CHMP4BQ9H444 224 aaKnown RBP4.85□□□□□ -1.63
CSTF1-202ENST00000415828 SEPSECSQ9HD40 501 aaKnown RBP4.85□□□□□ -1.63
CSTF1-202ENST00000415828 AGPAT4Q9NRZ5 378 aa4.85□□□□□ -1.63
CSTF1-202ENST00000415828 TMEM9Q9P0T7 183 aa4.85□□□□□ -1.63
CSTF1-202ENST00000415828 UBQLN1Q9UMX0 589 aaKnown RBP4.85□□□□□ -1.63
CSTF1-202ENST00000415828 TMEM184BQ9Y519 407 aaPredicted RBP4.85□□□□□ -1.63
CSTF1-202ENST00000415828 DYNC2H1Q8NCM8 4307 aaKnown RBP4.85□□□□□ -1.63
CSTF1-202ENST00000415828 CSMD3Q7Z407 3707 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 TTC41PQ6P2S7 1318 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 ERICH2A1L162 156 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 DPPA5A6NC42 116 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 AGAP5A6NIR3 686 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 C3orf70A6NLC5 250 aaPredicted RBP4.84□□□□□ -1.63
CSTF1-202ENST00000415828 F8VP50 259 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 MDM4O15151 490 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 INPP4BO15327 924 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 B4GAT1O43505 415 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 PLRG1O43660 514 aaKnown RBP4.84□□□□□ -1.63
CSTF1-202ENST00000415828 ACTL6BO94805 426 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 SLITRK3O94933 977 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 IFNA2P01563 188 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 KLKB1P03952 638 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 CSTBP04080 98 aaKnown RBP4.84□□□□□ -1.63
CSTF1-202ENST00000415828 IGKV2-30P06310 120 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 MCF2P10911 925 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 CYP3A5P20815 502 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 SERPINF1P36955 418 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 NR4A2P43354 598 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 MAGEA11P43364 429 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 VAMP7P51809 220 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 THOP1P52888 689 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 RPS18P62269 152 aaKnown RBP4.84□□□□□ -1.63
CSTF1-202ENST00000415828 NOP14P78316 857 aaKnown RBP4.84□□□□□ -1.63
CSTF1-202ENST00000415828 RAPGEF1Q13905 1077 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 ASIC2Q16515 512 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 AMZ1Q400G9 498 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 SPATA1Q5VX52 437 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 DEF8Q6ZN54 512 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 B4GALNT4Q76KP1 1039 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 CHST9Q7L1S5 443 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 PARGQ86W56 976 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 CATSPER3Q86XQ3 398 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 STK40Q8N2I9 435 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 PDCL2Q8N4E4 241 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 MYCT1Q8N699 235 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 BCAS4Q8TDM0 211 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 CLEC4CQ8WTT0 213 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 ZNF347Q96SE7 839 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 TMEM79Q9BSE2 394 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 TCHPQ9BT92 498 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 TRMOQ9BU70 441 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 TUBB6Q9BUF5 446 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 SORBS1Q9BX66 1292 aaKnown RBP4.84□□□□□ -1.63
CSTF1-202ENST00000415828 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.84□□□□□ -1.63
CSTF1-202ENST00000415828 AAMDCQ9H7C9 122 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 ZBTB20Q9HC78 741 aaPredicted RBP4.84□□□□□ -1.63
CSTF1-202ENST00000415828 C6orf50Q9HD87 102 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 LIN7CQ9NUP9 197 aaKnown RBP4.84□□□□□ -1.63
CSTF1-202ENST00000415828 DDX43Q9NXZ2 648 aaKnown RBP4.84□□□□□ -1.63
CSTF1-202ENST00000415828 PLA2G4CQ9UP65 541 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 TENM2Q9NT68 2774 aa4.84□□□□□ -1.63
CSTF1-202ENST00000415828 A0A0U1RQS6 177 aa4.83□□□□□ -1.64
CSTF1-202ENST00000415828 FAM90A18PA6NE21 464 aa4.83□□□□□ -1.64
CSTF1-202ENST00000415828 FAM90A16PA6NEW6 464 aa4.83□□□□□ -1.64
CSTF1-202ENST00000415828 FAM90A9PA6NNJ1 464 aa4.83□□□□□ -1.64
CSTF1-202ENST00000415828 EFCAB8A8MWE9 144 aa4.83□□□□□ -1.64
CSTF1-202ENST00000415828 FAM90A5PA8MXJ8 464 aa4.83□□□□□ -1.64
CSTF1-202ENST00000415828 RAD51BO15315 384 aa4.83□□□□□ -1.64
CSTF1-202ENST00000415828 DKC1O60832 514 aaKnown RBP eCLIP4.83□□□□□ -1.64
CSTF1-202ENST00000415828 SHOX2O60902 331 aaPredicted RBP4.83□□□□□ -1.64
CSTF1-202ENST00000415828 JRKO75564 520 aa4.83□□□□□ -1.64
CSTF1-202ENST00000415828 SLCO2B1O94956 709 aa4.83□□□□□ -1.64
CSTF1-202ENST00000415828 REC8O95072 547 aa4.83□□□□□ -1.64
CSTF1-202ENST00000415828 TMEM191BP0C7N4 346 aa4.83□□□□□ -1.64
CSTF1-202ENST00000415828 FAM90A15PP0C7V4 464 aa4.83□□□□□ -1.64
CSTF1-202ENST00000415828 FAM90A14PP0C7W9 464 aa4.83□□□□□ -1.64
CSTF1-202ENST00000415828 IGFBP2P18065 325 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms