RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 ALPPP05187 535 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 HOXD4P09016 255 aaPredicted RBP7.64□□□□□ -1.19
SIK3-203ENST00000415541 ZNF250P15622 560 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 CD72P21854 359 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 RPS3P23396 243 aaKnown RBP eCLIP7.64□□□□□ -1.19
SIK3-203ENST00000415541 PRKAR1BP31321 381 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 PPP3CCP48454 512 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 HOXA1P49639 335 aaPredicted RBP7.64□□□□□ -1.19
SIK3-203ENST00000415541 SSTP61278 116 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 USP10Q14694 798 aaKnown RBP7.64□□□□□ -1.19
SIK3-203ENST00000415541 ZBTB6Q15916 424 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 ZNF691Q5VV52 312 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 FSTL4Q6MZW2 842 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 CES5AQ6NT32 575 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 MZT2BQ6NZ67 158 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 C8orf82Q6P1X6 216 aaPredicted RBP7.64□□□□□ -1.19
SIK3-203ENST00000415541 TMEM81Q6P7N7 255 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 ADHFE1Q8IWW8 467 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 PPHLN1Q8NEY8 458 aaKnown RBP7.64□□□□□ -1.19
SIK3-203ENST00000415541 PXYLP1Q8TE99 480 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 ASB15Q8WXK1 588 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 LRRC58Q96CX6 371 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 EXOC2Q96KP1 924 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 C12orf57Q99622 126 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 RACGAP1Q9H0H5 632 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 TMEM245Q9H330 911 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 ZBTB20Q9HC78 741 aaPredicted RBP7.64□□□□□ -1.19
SIK3-203ENST00000415541 MRPL17Q9NRX2 175 aaKnown RBP7.64□□□□□ -1.19
SIK3-203ENST00000415541 CATSPERZQ9NTU4 200 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 RDH8Q9NYR8 311 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 SNX8Q9Y5X2 465 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 OR6C75A6NL08 312 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 PRMT5O14744 637 aaPredicted RBP7.64□□□□□ -1.19
SIK3-203ENST00000415541 GSTA4O15217 222 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 AKR7A2O43488 359 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 ERN1O75460 977 aaKnown RBP7.64□□□□□ -1.19
SIK3-203ENST00000415541 PPM1BO75688 479 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 ANXA9O76027 345 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 FGF18O76093 207 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 STAU1O95793 577 aaKnown RBP7.64□□□□□ -1.19
SIK3-203ENST00000415541 MAGEA12P43365 314 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 IL1RL1Q01638 556 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 UBE3AQ05086 875 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 AAK1Q2M2I8 961 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 MPP7Q5T2T1 576 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 PDZK1Q5T2W1 519 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 RETSATQ6NUM9 610 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 KLHL17Q6TDP4 642 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 TMPRSS11AQ6ZMR5 421 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 LUZP2Q86TE4 346 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 CIR1Q86X95 450 aaPredicted RBP7.64□□□□□ -1.19
SIK3-203ENST00000415541 OR2A14Q96R47 310 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 DCLRE1CQ96SD1 692 aaKnown RBP7.64□□□□□ -1.19
SIK3-203ENST00000415541 CDADC1Q9BWV3 514 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 NXF2Q9GZY0 626 aaKnown RBP7.64□□□□□ -1.19
SIK3-203ENST00000415541 MEAF6Q9HAF1 191 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 ACOT13Q9NPJ3 140 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 SLC17A6Q9P2U8 582 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 PSAT1Q9Y617 370 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 U3KQV3 271 aa7.64□□□□□ -1.19
SIK3-203ENST00000415541 RHOCP08134 193 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 CLEC2LP0C7M8 214 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 CPN2P22792 545 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 HMGCLP35914 325 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 NUP62P37198 522 aaPredicted RBP7.63□□□□□ -1.19
SIK3-203ENST00000415541 KCNK10P57789 538 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 ISL1P61371 349 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 IRF5Q13568 498 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 CTU2Q2VPK5 515 aaKnown RBP7.63□□□□□ -1.19
SIK3-203ENST00000415541 ZNF697Q5TEC3 545 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 TPGS1Q6ZTW0 290 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 LRRTM3Q86VH5 581 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 CDH26Q8IXH8 852 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 TIGD4Q8IY51 512 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 FBXO22Q8NEZ5 403 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 ZMIZ2Q8NF64 920 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 TEX47Q8TBZ9 253 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 ASB12Q8WXK4 309 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 MMP28Q9H239 520 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 MBD2Q9UBB5 411 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 UBQLN2Q9UHD9 624 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 ADGRE2Q9UHX3 823 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 ACOT9Q9Y305 439 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 AXIN1O15169 862 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 SSX4O60224 188 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 APOL3O95236 402 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 CST1P01037 141 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 CYBBP04839 570 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 PIRTP0C851 137 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 HOXD8P13378 290 aaPredicted RBP7.63□□□□□ -1.19
SIK3-203ENST00000415541 NCK1P16333 377 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 SYN1P17600 705 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 AVPR1AP37288 418 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 CCR10P46092 362 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 GLRBP48167 497 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 KCNC3Q14003 757 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 CAMK1Q14012 370 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 CAPRIN1Q14444 709 aaKnown RBP7.63□□□□□ -1.19
SIK3-203ENST00000415541 FBXO43Q4G163 708 aa7.63□□□□□ -1.19
SIK3-203ENST00000415541 COQ5Q5HYK3 327 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms