RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 GSNP06396 782 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 CLK3P49761 638 aaKnown RBP9.53□□□□□ -0.88
CD44-206ENST00000415148 IL1RL1Q01638 556 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 ZNF33BQ06732 778 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 BOP1Q14137 746 aaKnown RBP9.53□□□□□ -0.88
CD44-206ENST00000415148 GPR162Q16538 588 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 PLEKHG6Q3KR16 790 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 AGAP7PQ5VUJ5 663 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 LINGO4Q6UY18 593 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 C16orf59Q7L2K0 433 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 PRSS48Q7RTY5 328 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 DYNC2LI1Q8TCX1 351 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 LKAAEAR1Q8TD35 194 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 ZNF300Q96RE9 604 aaPredicted RBP9.53□□□□□ -0.88
CD44-206ENST00000415148 TMEM175Q9BSA9 504 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 BOCQ9BWV1 1114 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 KLF16Q9BXK1 252 aaPredicted RBP9.53□□□□□ -0.88
CD44-206ENST00000415148 ACPTQ9BZG2 426 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 KCTD5Q9NXV2 234 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 OR51B4Q9Y5P0 310 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 PRSS21Q9Y6M0 314 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 AP1M2Q9Y6Q5 423 aa9.53□□□□□ -0.88
CD44-206ENST00000415148 AGAP14A8MT82 685 aa9.52□□□□□ -0.88
CD44-206ENST00000415148 PRMT3O60678 531 aa9.52□□□□□ -0.88
CD44-206ENST00000415148 PDYNP01213 254 aa9.52□□□□□ -0.88
CD44-206ENST00000415148 TRBC1P01850 177 aa9.52□□□□□ -0.88
CD44-206ENST00000415148 MT-ND2P03891 347 aa9.52□□□□□ -0.88
CD44-206ENST00000415148 SEMG1P04279 462 aa9.52□□□□□ -0.88
CD44-206ENST00000415148 MYCLP1P12525 358 aaPredicted RBP9.52□□□□□ -0.88
CD44-206ENST00000415148 ZNF24P17028 368 aa9.52□□□□□ -0.88
CD44-206ENST00000415148 CTPS1P17812 591 aa9.52□□□□□ -0.88
CD44-206ENST00000415148 FPR1P21462 350 aa9.52□□□□□ -0.88
CD44-206ENST00000415148 MAPK8P45983 427 aa9.52□□□□□ -0.88
CD44-206ENST00000415148 ST13P50502 369 aaKnown RBP9.52□□□□□ -0.88
CD44-206ENST00000415148 DAPP51397 102 aa9.52□□□□□ -0.88
CD44-206ENST00000415148 FADDQ13158 208 aa9.52□□□□□ -0.88
CD44-206ENST00000415148 MBTPS1Q14703 1052 aa9.52□□□□□ -0.88
CD44-206ENST00000415148 CDKN3Q16667 212 aa9.52□□□□□ -0.88
CD44-206ENST00000415148 SGO1Q5FBB7 561 aa9.52□□□□□ -0.88
CD44-206ENST00000415148 RTP2Q5QGT7 225 aa9.52□□□□□ -0.88
CD44-206ENST00000415148 PLEKHG7Q6ZR37 379 aa9.52□□□□□ -0.88
CD44-206ENST00000415148 LRRC70Q7Z2Q7 622 aa9.52□□□□□ -0.88
CD44-206ENST00000415148 P2RY8Q86VZ1 359 aa9.52□□□□□ -0.88
CD44-206ENST00000415148 STARD8Q92502 1023 aa9.52□□□□□ -0.88
CD44-206ENST00000415148 HTRA1Q92743 480 aa9.52□□□□□ -0.88
CD44-206ENST00000415148 CASD1Q96PB1 797 aa9.52□□□□□ -0.88
CD44-206ENST00000415148 TTPALQ9BTX7 342 aa9.52□□□□□ -0.88
CD44-206ENST00000415148 IL26Q9NPH9 171 aa9.52□□□□□ -0.88
CD44-206ENST00000415148 ITM2CQ9NQX7 267 aa9.52□□□□□ -0.88
CD44-206ENST00000415148 AASDHPPTQ9NRN7 309 aa9.52□□□□□ -0.88
CD44-206ENST00000415148 TRPM5Q9NZQ8 1165 aa9.52□□□□□ -0.88
CD44-206ENST00000415148 NDRG4Q9ULP0 352 aaKnown RBP9.52□□□□□ -0.88
CD44-206ENST00000415148 PCDHB7Q9Y5E2 793 aa9.52□□□□□ -0.88
CD44-206ENST00000415148 GLYATL1P3A0A0U1RQE8 302 aa9.52□□□□□ -0.89
CD44-206ENST00000415148 CLDN24A6NM45 220 aa9.52□□□□□ -0.89
CD44-206ENST00000415148 RFXANKO14593 260 aa9.52□□□□□ -0.89
CD44-206ENST00000415148 LCKP06239 509 aa9.52□□□□□ -0.89
CD44-206ENST00000415148 ALPIP09923 528 aa9.52□□□□□ -0.89
CD44-206ENST00000415148 PSMB9P28065 219 aa9.52□□□□□ -0.89
CD44-206ENST00000415148 NR4A2P43354 598 aa9.52□□□□□ -0.89
CD44-206ENST00000415148 PPP3CCP48454 512 aa9.52□□□□□ -0.89
CD44-206ENST00000415148 RPIAP49247 311 aa9.52□□□□□ -0.89
CD44-206ENST00000415148 SLC11A1P49279 550 aa9.52□□□□□ -0.89
CD44-206ENST00000415148 ZNF157P51786 506 aaPredicted RBP9.52□□□□□ -0.89
CD44-206ENST00000415148 FCGRTP55899 365 aa9.52□□□□□ -0.89
CD44-206ENST00000415148 SRSF11Q05519 484 aaKnown RBP9.52□□□□□ -0.89
CD44-206ENST00000415148 MTAPQ13126 283 aa9.52□□□□□ -0.89
CD44-206ENST00000415148 SLC14A1Q13336 389 aa9.52□□□□□ -0.89
CD44-206ENST00000415148 CLCA4Q14CN2 919 aa9.52□□□□□ -0.89
CD44-206ENST00000415148 HIST2H2ACQ16777 129 aaPredicted RBP9.52□□□□□ -0.89
CD44-206ENST00000415148 PRSS36Q5K4E3 855 aa9.52□□□□□ -0.89
CD44-206ENST00000415148 C6orf183Q5T699 404 aa9.52□□□□□ -0.89
CD44-206ENST00000415148 CST9Q5W186 159 aa9.52□□□□□ -0.89
CD44-206ENST00000415148 PAGE2Q7Z2X7 111 aa9.52□□□□□ -0.89
CD44-206ENST00000415148 ANKRD46Q86W74 232 aa9.52□□□□□ -0.89
CD44-206ENST00000415148 CCDC71Q8IV32 467 aaPredicted RBP9.52□□□□□ -0.89
CD44-206ENST00000415148 CPA6Q8N4T0 437 aa9.52□□□□□ -0.89
CD44-206ENST00000415148 CLDN19Q8N6F1 224 aa9.52□□□□□ -0.89
CD44-206ENST00000415148 L3MBTL4Q8NA19 623 aa9.52□□□□□ -0.89
CD44-206ENST00000415148 FAM83FQ8NEG4 500 aaPredicted RBP9.52□□□□□ -0.89
CD44-206ENST00000415148 FBXO22Q8NEZ5 403 aa9.52□□□□□ -0.89
CD44-206ENST00000415148 SELENOMQ8WWX9 145 aa9.52□□□□□ -0.89
CD44-206ENST00000415148 ASPSCR1Q9BZE9 553 aa9.52□□□□□ -0.89
CD44-206ENST00000415148 SLIRPQ9GZT3 109 aaKnown RBP9.52□□□□□ -0.89
CD44-206ENST00000415148 GKN1Q9NS71 199 aa9.52□□□□□ -0.89
CD44-206ENST00000415148 CRLS1Q9UJA2 301 aa9.52□□□□□ -0.89
CD44-206ENST00000415148 VPS4AQ9UN37 437 aa9.52□□□□□ -0.89
CD44-206ENST00000415148 ABCG2Q9UNQ0 655 aa9.52□□□□□ -0.89
CD44-206ENST00000415148 GMPPBQ9Y5P6 360 aa9.52□□□□□ -0.89
CD44-206ENST00000415148 E9PQ18 207 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 RGS10O43665 173 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 SOCS5O75159 536 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 KCNK2O95069 426 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 FABP3P05413 133 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 GPX2P18283 190 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 EPORP19235 508 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 EFNA1P20827 205 aaPredicted RBP9.51□□□□□ -0.89
CD44-206ENST00000415148 PRPS1L1P21108 318 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 MZF1P28698 734 aaPredicted RBP9.51□□□□□ -0.89
CD44-206ENST00000415148 CD40LGP29965 261 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms