RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 LIPJQ5W064 366 aa13.75□□□□□ -0.21
SF3B1-204ENST00000414963 ICE2Q659A1 982 aa13.75□□□□□ -0.21
SF3B1-204ENST00000414963 ATG9BQ674R7 924 aa13.75□□□□□ -0.21
SF3B1-204ENST00000414963 NXPE4Q6UWF7 544 aa13.75□□□□□ -0.21
SF3B1-204ENST00000414963 MILR1Q7Z6M3 343 aa13.75□□□□□ -0.21
SF3B1-204ENST00000414963 C17orf64Q86WR6 236 aa13.75□□□□□ -0.21
SF3B1-204ENST00000414963 CLYBLQ8N0X4 340 aa13.75□□□□□ -0.21
SF3B1-204ENST00000414963 EID2Q8N6I1 236 aa13.75□□□□□ -0.21
SF3B1-204ENST00000414963 OR4K1Q8NGD4 311 aa13.75□□□□□ -0.21
SF3B1-204ENST00000414963 PIWIL2Q8TC59 973 aaKnown RBP13.75□□□□□ -0.21
SF3B1-204ENST00000414963 SLC5A11Q8WWX8 675 aa13.75□□□□□ -0.21
SF3B1-204ENST00000414963 JPH3Q8WXH2 748 aaPredicted RBP13.75□□□□□ -0.21
SF3B1-204ENST00000414963 ATP6V1E2Q96A05 226 aa13.75□□□□□ -0.21
SF3B1-204ENST00000414963 FAR2Q96K12 515 aa13.75□□□□□ -0.21
SF3B1-204ENST00000414963 TBC1D10AQ9BXI6 508 aa13.75□□□□□ -0.21
SF3B1-204ENST00000414963 RAB33BQ9H082 229 aa13.75□□□□□ -0.21
SF3B1-204ENST00000414963 TNFRSF12AQ9NP84 129 aa13.75□□□□□ -0.21
SF3B1-204ENST00000414963 SEMA4GQ9NTN9 838 aa13.75□□□□□ -0.21
SF3B1-204ENST00000414963 FGFR1OP2Q9NVK5 253 aa13.75□□□□□ -0.21
SF3B1-204ENST00000414963 TAC3Q9UHF0 121 aa13.75□□□□□ -0.21
SF3B1-204ENST00000414963 TRPS1Q9UHF7 1281 aa13.75□□□□□ -0.21
SF3B1-204ENST00000414963 KLK4Q9Y5K2 254 aa13.75□□□□□ -0.21
SF3B1-204ENST00000414963 MUC6Q6W4X9 2439 aa13.75□□□□□ -0.21
SF3B1-204ENST00000414963 ANKRD12Q6UB98 2062 aa13.75□□□□□ -0.21
SF3B1-204ENST00000414963 KCNE1BA0A087WTH5 132 aa13.74□□□□□ -0.21
SF3B1-204ENST00000414963 OR5K3A6NET4 321 aa13.74□□□□□ -0.21
SF3B1-204ENST00000414963 C2orf74A8MZ97 194 aa13.74□□□□□ -0.21
SF3B1-204ENST00000414963 GIPC1O14908 333 aa13.74□□□□□ -0.21
SF3B1-204ENST00000414963 AZIN1O14977 448 aa13.74□□□□□ -0.21
SF3B1-204ENST00000414963 UBXN7O94888 489 aa13.74□□□□□ -0.21
SF3B1-204ENST00000414963 C1GALT1C1LP0DN25 315 aa13.74□□□□□ -0.21
SF3B1-204ENST00000414963 CKMT1AP12532 417 aa13.74□□□□□ -0.21
SF3B1-204ENST00000414963 PRDX3P30048 256 aaKnown RBP13.74□□□□□ -0.21
SF3B1-204ENST00000414963 GRK6P43250 576 aa13.74□□□□□ -0.21
SF3B1-204ENST00000414963 IRF8Q02556 426 aa13.74□□□□□ -0.21
SF3B1-204ENST00000414963 SPEM2Q0P670 501 aa13.74□□□□□ -0.21
SF3B1-204ENST00000414963 CHIT1Q13231 466 aa13.74□□□□□ -0.21
SF3B1-204ENST00000414963 SQSTM1Q13501 440 aa13.74□□□□□ -0.21
SF3B1-204ENST00000414963 SLC5A12Q1EHB4 618 aa13.74□□□□□ -0.21
SF3B1-204ENST00000414963 SH2D4BQ5SQS7 431 aa13.74□□□□□ -0.21
SF3B1-204ENST00000414963 THEMIS2Q5TEJ8 643 aa13.74□□□□□ -0.21
SF3B1-204ENST00000414963 KANK2Q63ZY3 851 aa13.74□□□□□ -0.21
SF3B1-204ENST00000414963 LETMD1Q6P1Q0 360 aa13.74□□□□□ -0.21
SF3B1-204ENST00000414963 RNF165Q6ZSG1 346 aa13.74□□□□□ -0.21
SF3B1-204ENST00000414963 OOSP2Q86WS3 158 aa13.74□□□□□ -0.21
SF3B1-204ENST00000414963 OR2L3Q8NG85 312 aa13.74□□□□□ -0.21
SF3B1-204ENST00000414963 OR4F6Q8NGB9 312 aa13.74□□□□□ -0.21
SF3B1-204ENST00000414963 OR2A14Q96R47 310 aa13.74□□□□□ -0.21
SF3B1-204ENST00000414963 SLC29A3Q9BZD2 475 aa13.74□□□□□ -0.21
SF3B1-204ENST00000414963 PITHD1Q9GZP4 211 aaPredicted RBP13.74□□□□□ -0.21
SF3B1-204ENST00000414963 ACTR8Q9H981 624 aa13.74□□□□□ -0.21
SF3B1-204ENST00000414963 PELI2Q9HAT8 420 aa13.74□□□□□ -0.21
SF3B1-204ENST00000414963 PNPOQ9NVS9 261 aa13.74□□□□□ -0.21
SF3B1-204ENST00000414963 HRASLS2Q9NWW9 162 aa13.74□□□□□ -0.21
SF3B1-204ENST00000414963 ACTR10Q9NZ32 417 aa13.74□□□□□ -0.21
SF3B1-204ENST00000414963 NCDNQ9UBB6 729 aa13.74□□□□□ -0.21
SF3B1-204ENST00000414963 VTI1BQ9UEU0 232 aa13.74□□□□□ -0.21
SF3B1-204ENST00000414963 EPHA6Q9UF33 1036 aa13.74□□□□□ -0.21
SF3B1-204ENST00000414963 SH2B3Q9UQQ2 575 aa13.74□□□□□ -0.21
SF3B1-204ENST00000414963 VPS13AQ96RL7 3174 aa13.74□□□□□ -0.21
SF3B1-204ENST00000414963 ARID1BQ8NFD5 2236 aaPredicted RBP13.74□□□□□ -0.21
SF3B1-204ENST00000414963 OTOGLQ3ZCN5 2332 aa13.73□□□□□ -0.21
SF3B1-204ENST00000414963 EME2A4GXA9 379 aaPredicted RBP13.73□□□□□ -0.21
SF3B1-204ENST00000414963 ISM1B1AKI9 464 aa13.73□□□□□ -0.21
SF3B1-204ENST00000414963 E7EQ34 232 aa13.73□□□□□ -0.21
SF3B1-204ENST00000414963 FLRT2O43155 660 aa13.73□□□□□ -0.21
SF3B1-204ENST00000414963 ZW10O43264 779 aa13.73□□□□□ -0.21
SF3B1-204ENST00000414963 B4GAT1O43505 415 aa13.73□□□□□ -0.21
SF3B1-204ENST00000414963 TNFSF14O43557 240 aa13.73□□□□□ -0.21
SF3B1-204ENST00000414963 OR4F21O95013 312 aa13.73□□□□□ -0.21
SF3B1-204ENST00000414963 FAM107AO95990 144 aa13.73□□□□□ -0.21
SF3B1-204ENST00000414963 PROS1P07225 676 aa13.73□□□□□ -0.21
SF3B1-204ENST00000414963 UROSP10746 265 aa13.73□□□□□ -0.21
SF3B1-204ENST00000414963 HGFP14210 728 aa13.73□□□□□ -0.21
SF3B1-204ENST00000414963 JUPP14923 745 aa13.73□□□□□ -0.21
SF3B1-204ENST00000414963 ALOX15P16050 662 aaPredicted RBP13.73□□□□□ -0.21
SF3B1-204ENST00000414963 POLR2CP19387 275 aaPredicted RBP13.73□□□□□ -0.21
SF3B1-204ENST00000414963 CMPK1P30085 196 aa13.73□□□□□ -0.21
SF3B1-204ENST00000414963 HNF4AP41235 474 aa13.73□□□□□ -0.21
SF3B1-204ENST00000414963 DUSP3P51452 185 aaPredicted RBP13.73□□□□□ -0.21
SF3B1-204ENST00000414963 CCR8P51685 355 aa13.73□□□□□ -0.21
SF3B1-204ENST00000414963 GPLD1P80108 840 aa13.73□□□□□ -0.21
SF3B1-204ENST00000414963 RELAQ04206 551 aa13.73□□□□□ -0.21
SF3B1-204ENST00000414963 ZNF33BQ06732 778 aa13.73□□□□□ -0.21
SF3B1-204ENST00000414963 LAPTM5Q13571 262 aa13.73□□□□□ -0.21
SF3B1-204ENST00000414963 TSTA3Q13630 321 aaPredicted RBP13.73□□□□□ -0.21
SF3B1-204ENST00000414963 DOC2AQ14183 400 aa13.73□□□□□ -0.21
SF3B1-204ENST00000414963 SF1Q15637 639 aaKnown RBP13.73□□□□□ -0.21
SF3B1-204ENST00000414963 XKR6Q5GH73 641 aa13.73□□□□□ -0.21
SF3B1-204ENST00000414963 GRHL2Q6ISB3 625 aa13.73□□□□□ -0.21
SF3B1-204ENST00000414963 CGB2Q6NT52 195 aa13.73□□□□□ -0.21
SF3B1-204ENST00000414963 ZNF761Q86XN6 746 aaPredicted RBP13.73□□□□□ -0.21
SF3B1-204ENST00000414963 FAM129CQ86XR2 697 aa13.73□□□□□ -0.21
SF3B1-204ENST00000414963 AFAP1L2Q8N4X5 818 aa13.73□□□□□ -0.21
SF3B1-204ENST00000414963 STON2Q8WXE9 905 aa13.73□□□□□ -0.21
SF3B1-204ENST00000414963 NAT6Q93015 286 aa13.73□□□□□ -0.21
SF3B1-204ENST00000414963 PTCD3Q96EY7 689 aaKnown RBP13.73□□□□□ -0.21
SF3B1-204ENST00000414963 CDK15Q96Q40 435 aa13.73□□□□□ -0.21
SF3B1-204ENST00000414963 CCT8L2Q96SF2 557 aa13.73□□□□□ -0.21
SF3B1-204ENST00000414963 SIKE1Q9BRV8 207 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms