RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 FAM69BQ5VUD6 431 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 BTBD1Q9H0C5 482 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 EURLQ9NYK6 297 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 ANKRD34BA5PLL1 514 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 JUPP14923 745 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 MLLT6P55198 1093 aaPredicted RBP18.07■□□□□ 0.48
SHANK3-202ENST00000414786 GALK2Q01415 458 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 TUBB3Q13509 450 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 PDK4Q16654 411 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 SUSD1Q6UWL2 747 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 SHDQ96IW2 340 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 TGM7Q96PF1 710 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 TRIM36Q9NQ86 728 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 NANSQ9NR45 359 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 FAM118AQ9NWS6 357 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 NOP16Q9Y3C1 178 aaKnown RBP18.07■□□□□ 0.48
SHANK3-202ENST00000414786 FADS3Q9Y5Q0 445 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 ELF3P78545 371 aaPredicted RBP18.07■□□□□ 0.48
SHANK3-202ENST00000414786 ZNF283Q8N7M2 679 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 SLC35C1Q96A29 364 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 SLC25A44Q96H78 314 aaPredicted RBP18.07■□□□□ 0.48
SHANK3-202ENST00000414786 MAGEL2Q9UJ55 1249 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 PXDNLA1KZ92 1463 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 KCNJ9Q92806 393 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 HEMK1Q9Y5R4 338 aaPredicted RBP18.07■□□□□ 0.48
SHANK3-202ENST00000414786 CTBP2P56545 445 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 PPP1R8Q12972 351 aaKnown RBP18.07■□□□□ 0.48
SHANK3-202ENST00000414786 RAET1LQ5VY80 246 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 USP53Q70EK8 1073 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 DBF4BQ8NFT6 615 aa18.07■□□□□ 0.48
SHANK3-202ENST00000414786 PIP5K1BO14986 540 aa18.06■□□□□ 0.48
SHANK3-202ENST00000414786 PRLRP16471 622 aa18.06■□□□□ 0.48
SHANK3-202ENST00000414786 FNTBP49356 437 aa18.06■□□□□ 0.48
SHANK3-202ENST00000414786 ZACNQ401N2 412 aa18.06■□□□□ 0.48
SHANK3-202ENST00000414786 TMEM17Q86X19 198 aa18.06■□□□□ 0.48
SHANK3-202ENST00000414786 LNX1Q8TBB1 728 aaPredicted RBP18.06■□□□□ 0.48
SHANK3-202ENST00000414786 STYXQ8WUJ0 223 aa18.06■□□□□ 0.48
SHANK3-202ENST00000414786 COL21A1Q96P44 957 aa18.06■□□□□ 0.48
SHANK3-202ENST00000414786 TVP23AA6NH52 213 aa18.06■□□□□ 0.48
SHANK3-202ENST00000414786 LRRC66Q68CR7 880 aa18.06■□□□□ 0.48
SHANK3-202ENST00000414786 KIF18BQ86Y91 864 aa18.06■□□□□ 0.48
SHANK3-202ENST00000414786 UTS2RQ9UKP6 389 aa18.06■□□□□ 0.48
SHANK3-202ENST00000414786 PBRM1Q86U86 1689 aa18.06■□□□□ 0.48
SHANK3-202ENST00000414786 HTR3EA5X5Y0 456 aa18.06■□□□□ 0.48
SHANK3-202ENST00000414786 PCDH7O60245 1069 aa18.06■□□□□ 0.48
SHANK3-202ENST00000414786 CTHP32929 405 aa18.06■□□□□ 0.48
SHANK3-202ENST00000414786 CCL14Q16627 93 aa18.06■□□□□ 0.48
SHANK3-202ENST00000414786 CNTD1Q8N815 330 aa18.06■□□□□ 0.48
SHANK3-202ENST00000414786 SPARCP09486 303 aa18.06■□□□□ 0.48
SHANK3-202ENST00000414786 OR2B6P58173 313 aa18.06■□□□□ 0.48
SHANK3-202ENST00000414786 FAM174BQ3ZCQ3 159 aa18.06■□□□□ 0.48
SHANK3-202ENST00000414786 LRTOMTQ8WZ04 291 aa18.06■□□□□ 0.48
SHANK3-202ENST00000414786 C11orf84Q9BUA3 381 aaPredicted RBP18.06■□□□□ 0.48
SHANK3-202ENST00000414786 SPIN1Q9Y657 262 aaPredicted RBP18.06■□□□□ 0.48
SHANK3-202ENST00000414786 hCG_1818297A0A087WSY0 165 aa18.06■□□□□ 0.48
SHANK3-202ENST00000414786 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.06■□□□□ 0.48
SHANK3-202ENST00000414786 CRB2Q5IJ48 1285 aa18.06■□□□□ 0.48
SHANK3-202ENST00000414786 OR52E4Q8NGH9 312 aa18.06■□□□□ 0.48
SHANK3-202ENST00000414786 PPTC7Q8NI37 304 aa18.06■□□□□ 0.48
SHANK3-202ENST00000414786 AKAP1Q92667 903 aaKnown RBP eCLIP18.06■□□□□ 0.48
SHANK3-202ENST00000414786 MMADHCQ9H3L0 296 aaPredicted RBP18.06■□□□□ 0.48
SHANK3-202ENST00000414786 INPPL1O15357 1258 aa18.06■□□□□ 0.48
SHANK3-202ENST00000414786 LMO2P25791 158 aa18.06■□□□□ 0.48
SHANK3-202ENST00000414786 PLP2Q04941 152 aa18.06■□□□□ 0.48
SHANK3-202ENST00000414786 SCARB2Q14108 478 aa18.06■□□□□ 0.48
SHANK3-202ENST00000414786 Q6ZVU0 165 aa18.06■□□□□ 0.48
SHANK3-202ENST00000414786 CCDC80Q76M96 950 aa18.06■□□□□ 0.48
SHANK3-202ENST00000414786 STK11Q15831 433 aa18.05■□□□□ 0.48
SHANK3-202ENST00000414786 ZNF648Q5T619 568 aaPredicted RBP18.05■□□□□ 0.48
SHANK3-202ENST00000414786 EGFLAMQ63HQ2 1017 aa18.05■□□□□ 0.48
SHANK3-202ENST00000414786 CPT1BQ92523 772 aa18.05■□□□□ 0.48
SHANK3-202ENST00000414786 AGAP2Q99490 1192 aa18.05■□□□□ 0.48
SHANK3-202ENST00000414786 SERTAD3Q9UJW9 196 aa18.05■□□□□ 0.48
SHANK3-202ENST00000414786 COL6A2P12110 1019 aa18.05■□□□□ 0.48
SHANK3-202ENST00000414786 CHRNA4P43681 627 aa18.05■□□□□ 0.48
SHANK3-202ENST00000414786 UGT8Q16880 541 aa18.05■□□□□ 0.48
SHANK3-202ENST00000414786 TMEM214Q6NUQ4 689 aaKnown RBP18.05■□□□□ 0.48
SHANK3-202ENST00000414786 LIX1LQ8IVB5 337 aa18.05■□□□□ 0.48
SHANK3-202ENST00000414786 CROCCP3Q8IVE0 287 aa18.05■□□□□ 0.48
SHANK3-202ENST00000414786 PDPRQ8NCN5 879 aa18.05■□□□□ 0.48
SHANK3-202ENST00000414786 RTKNQ9BST9 563 aa18.05■□□□□ 0.48
SHANK3-202ENST00000414786 RHCGQ9UBD6 479 aa18.05■□□□□ 0.48
SHANK3-202ENST00000414786 CD48P09326 243 aa18.05■□□□□ 0.48
SHANK3-202ENST00000414786 TEAD2Q15562 447 aa18.05■□□□□ 0.48
SHANK3-202ENST00000414786 TMEM35AQ53FP2 167 aa18.05■□□□□ 0.48
SHANK3-202ENST00000414786 TOP6BLQ8N6T0 577 aa18.05■□□□□ 0.48
SHANK3-202ENST00000414786 PNPLA3Q9NST1 481 aa18.05■□□□□ 0.48
SHANK3-202ENST00000414786 SMIM28A0A1B0GU29 152 aa18.05■□□□□ 0.48
SHANK3-202ENST00000414786 OR6Q1Q8NGQ2 317 aa18.05■□□□□ 0.48
SHANK3-202ENST00000414786 ZNF670Q9BS34 389 aa18.05■□□□□ 0.48
SHANK3-202ENST00000414786 FARSBQ9NSD9 589 aaKnown RBP18.05■□□□□ 0.48
SHANK3-202ENST00000414786 TCAF2A6NFQ2 919 aa18.05■□□□□ 0.48
SHANK3-202ENST00000414786 ADAP00813 363 aa18.05■□□□□ 0.48
SHANK3-202ENST00000414786 AUHQ13825 339 aaKnown RBP18.05■□□□□ 0.48
SHANK3-202ENST00000414786 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.05■□□□□ 0.48
SHANK3-202ENST00000414786 CDC14AQ9UNH5 594 aa18.05■□□□□ 0.48
SHANK3-202ENST00000414786 GMEB1Q9Y692 573 aa18.05■□□□□ 0.48
SHANK3-202ENST00000414786 GP1BBP13224 206 aa18.05■□□□□ 0.48
SHANK3-202ENST00000414786 VSX2P58304 361 aaPredicted RBP18.05■□□□□ 0.48
SHANK3-202ENST00000414786 SLC2A7Q6PXP3 512 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms