RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 IFT81Q8WYA0 676 aa9.67□□□□□ -0.86
TMEM248-202ENST00000413593 STARD8Q92502 1023 aa9.67□□□□□ -0.86
TMEM248-202ENST00000413593 TTC9Q92623 222 aa9.67□□□□□ -0.86
TMEM248-202ENST00000413593 MR1Q95460 341 aa9.67□□□□□ -0.86
TMEM248-202ENST00000413593 CLIP3Q96DZ5 547 aa9.67□□□□□ -0.86
TMEM248-202ENST00000413593 UBL7Q96S82 380 aaPredicted RBP9.67□□□□□ -0.86
TMEM248-202ENST00000413593 GPR22Q99680 433 aa9.67□□□□□ -0.86
TMEM248-202ENST00000413593 DPH7Q9BTV6 452 aa9.67□□□□□ -0.86
TMEM248-202ENST00000413593 POPDC3Q9HBV1 291 aa9.67□□□□□ -0.86
TMEM248-202ENST00000413593 SLC6A20Q9NP91 592 aa9.67□□□□□ -0.86
TMEM248-202ENST00000413593 MRPS30Q9NP92 439 aaKnown RBP9.67□□□□□ -0.86
TMEM248-202ENST00000413593 ENAMQ9NRM1 1142 aa9.67□□□□□ -0.86
TMEM248-202ENST00000413593 KCND3Q9UK17 655 aa9.67□□□□□ -0.86
TMEM248-202ENST00000413593 IKZF3Q9UKT9 509 aa9.67□□□□□ -0.86
TMEM248-202ENST00000413593 MTO1Q9Y2Z2 717 aaKnown RBP9.67□□□□□ -0.86
TMEM248-202ENST00000413593 PCDHGA6Q9Y5G7 932 aa9.67□□□□□ -0.86
TMEM248-202ENST00000413593 MRPS18BQ9Y676 258 aaKnown RBP9.67□□□□□ -0.86
TMEM248-202ENST00000413593 AP1M2Q9Y6Q5 423 aa9.67□□□□□ -0.86
TMEM248-202ENST00000413593 IGKV1-8A0A0C4DH67 115 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 ERVH48-1M5A8F1 160 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 NKX2-8O15522 239 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 ZSCAN9O15535 394 aaPredicted RBP9.66□□□□□ -0.86
TMEM248-202ENST00000413593 FAM155BO75949 473 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 CCNDBP1O95273 360 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 WISP3O95389 354 aaPredicted RBP9.66□□□□□ -0.86
TMEM248-202ENST00000413593 ITGB2P05107 769 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 ENO2P09104 434 aaPredicted RBP9.66□□□□□ -0.86
TMEM248-202ENST00000413593 HIST1H2AGP0C0S8 130 aaPredicted RBP9.66□□□□□ -0.86
TMEM248-202ENST00000413593 HIST1H2ADP20671 130 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 SPRP35270 261 aaPredicted RBP9.66□□□□□ -0.86
TMEM248-202ENST00000413593 GCGRP47871 477 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 SLC12A2P55011 1212 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 AP1S2P56377 157 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 TBPL1P62380 186 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 ABATP80404 500 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 NAB1Q13506 487 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 USP10Q14694 798 aaKnown RBP9.66□□□□□ -0.86
TMEM248-202ENST00000413593 EFTUD2Q15029 972 aaKnown RBP eCLIP9.66□□□□□ -0.867e-6■■■■■ 30.5
TMEM248-202ENST00000413593 PPP1R3AQ16821 1122 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 ZXDCQ2QGD7 858 aaPredicted RBP9.66□□□□□ -0.86
TMEM248-202ENST00000413593 PTCHD3Q3KNS1 767 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 CRTC2Q53ET0 693 aaPredicted RBP9.66□□□□□ -0.86
TMEM248-202ENST00000413593 SOWAHCQ53LP3 525 aaPredicted RBP9.66□□□□□ -0.86
TMEM248-202ENST00000413593 UBAP2Q5T6F2 1119 aaKnown RBP9.66□□□□□ -0.86
TMEM248-202ENST00000413593 ZNF385CQ66K41 422 aaPredicted RBP9.66□□□□□ -0.86
TMEM248-202ENST00000413593 LCN10Q6JVE6 187 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 RHBDD2Q6NTF9 364 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 AGTRAPQ6RW13 159 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 PCSK4Q6UW60 755 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 SBSNQ6UWP8 590 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 CEP128Q6ZU80 1094 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 RNF44Q7L0R7 432 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 PAQR7Q86WK9 346 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 ZNF655Q8N720 491 aaPredicted RBP9.66□□□□□ -0.86
TMEM248-202ENST00000413593 ANKRD7Q92527 254 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 TSPAN17Q96FV3 270 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 HIST1H2AHQ96KK5 128 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 ZNF285Q96NJ3 590 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 BBC3Q96PG8 261 aaPredicted RBP9.66□□□□□ -0.86
TMEM248-202ENST00000413593 RUFY1Q96T51 708 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 FMO2Q99518 471 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 HIST1H2AJQ99878 128 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 PLCD4Q9BRC7 762 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 H2AFJQ9BTM1 129 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 GPR87Q9BY21 358 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 SLC7A5P2Q9GIP4 190 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 TSPYL1Q9H0U9 437 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 ATG10Q9H0Y0 220 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 CHST8Q9H2A9 424 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 CAB39LQ9H9S4 337 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 GPAMQ9HCL2 828 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 CCDC177Q9NQR7 707 aaPredicted RBP9.66□□□□□ -0.86
TMEM248-202ENST00000413593 ABCF3Q9NUQ8 709 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 IRAK4Q9NWZ3 460 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 NINJ2Q9NZG7 142 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 ANKMY1Q9P2S6 941 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 NOVA2Q9UNW9 492 aaKnown RBP9.66□□□□□ -0.86
TMEM248-202ENST00000413593 SRPK3Q9UPE1 567 aa9.66□□□□□ -0.86
TMEM248-202ENST00000413593 LOC105369274A0A096LPK9 316 aa9.65□□□□□ -0.86
TMEM248-202ENST00000413593 LOC102723532A0A0G2JNH3 316 aa9.65□□□□□ -0.86
TMEM248-202ENST00000413593 A0A0J9YVX5 310 aa9.65□□□□□ -0.86
TMEM248-202ENST00000413593 PABPN1LA6NDY0 278 aaKnown RBP9.65□□□□□ -0.86
TMEM248-202ENST00000413593 NPEPPSL1A6NEC2 478 aa9.65□□□□□ -0.86
TMEM248-202ENST00000413593 CDC7O00311 574 aa9.65□□□□□ -0.86
TMEM248-202ENST00000413593 ATXN7O15265 892 aaPredicted RBP9.65□□□□□ -0.86
TMEM248-202ENST00000413593 PHGDHO43175 533 aaKnown RBP9.65□□□□□ -0.86
TMEM248-202ENST00000413593 SRPX2O60687 465 aaPredicted RBP9.65□□□□□ -0.86
TMEM248-202ENST00000413593 KATNA1O75449 491 aa9.65□□□□□ -0.86
TMEM248-202ENST00000413593 CAPN1P07384 714 aa9.65□□□□□ -0.86
TMEM248-202ENST00000413593 PRKAR1AP10644 381 aa9.65□□□□□ -0.86
TMEM248-202ENST00000413593 STMN1P16949 149 aa9.65□□□□□ -0.86
TMEM248-202ENST00000413593 MC1RQ01726 317 aa9.65□□□□□ -0.86
TMEM248-202ENST00000413593 CDC20Q12834 499 aa9.65□□□□□ -0.86
TMEM248-202ENST00000413593 NAE1Q13564 534 aa9.65□□□□□ -0.86
TMEM248-202ENST00000413593 ZKSCAN8Q15776 578 aaPredicted RBP9.65□□□□□ -0.86
TMEM248-202ENST00000413593 TCTE1Q5JU00 501 aa9.65□□□□□ -0.86
TMEM248-202ENST00000413593 GRTP1Q5TC63 336 aa9.65□□□□□ -0.86
TMEM248-202ENST00000413593 THEMIS2Q5TEJ8 643 aa9.65□□□□□ -0.86
TMEM248-202ENST00000413593 PRAMEF13Q5VWM6 474 aa9.65□□□□□ -0.86
TMEM248-202ENST00000413593 FRMPD2BQ6IN97 320 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms