RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 H0YIG0 161 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 PEX12O00623 359 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 TP73O15350 636 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 URI1O94763 535 aaPredicted RBP6.13□□□□□ -1.43
USP54-202ENST00000413442 SLC16A8O95907 504 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 ANXA5P08758 320 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 CTAGE8P0CG41 777 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 ICAM2P13598 275 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 ZNF28P17035 718 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 MAGP20916 626 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 FDXRP22570 491 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 CNTFP26441 200 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 GABRB3P28472 473 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 STX2P32856 288 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 GP5P40197 560 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 GCGRP47871 477 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 PMS2P54278 862 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 PPP1CAP62136 330 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 RPS15AP62244 130 aaKnown RBP6.13□□□□□ -1.43
USP54-202ENST00000413442 MEF2AQ02078 507 aaPredicted RBP6.13□□□□□ -1.43
USP54-202ENST00000413442 GPS2Q13227 327 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 KCNAB1Q14722 419 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 NCF4Q15080 339 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 NKAIN1Q4KMZ8 207 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 MSS51Q4VC12 460 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 ZNF789Q5FWF6 425 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 LGSNQ5TDP6 509 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 HECTD2Q5U5R9 776 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 ICE2Q659A1 982 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 ZNF385CQ66K41 422 aaPredicted RBP6.13□□□□□ -1.43
USP54-202ENST00000413442 ZNF425Q6IV72 752 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 C8orf74Q6P047 294 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 MRPL14Q6P1L8 145 aaKnown RBP6.13□□□□□ -1.43
USP54-202ENST00000413442 METTL2BQ6P1Q9 378 aaKnown RBP6.13□□□□□ -1.43
USP54-202ENST00000413442 FBXO42Q6P3S6 717 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 PAQR3Q6TCH7 311 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 RNF44Q7L0R7 432 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 ZNF605Q86T29 641 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 ADAMTSL2Q86TH1 951 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 CTAGE6Q86UF2 777 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 ZC3HC1Q86WB0 502 aaKnown RBP6.13□□□□□ -1.43
USP54-202ENST00000413442 C17orf64Q86WR6 236 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 CTAGE4Q8IX94 777 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 AGGF1Q8N302 714 aaeCLIP6.13□□□□□ -1.43
USP54-202ENST00000413442 CAMKVQ8NCB2 501 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 ABHD11Q8NFV4 315 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 TTLQ8NG68 377 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 OR4K1Q8NGD4 311 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 OR2Y1Q8NGV0 311 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 LKAAEAR1Q8TD35 194 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 CT55Q8WUE5 264 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 EEF1AKMT1Q8WVE0 214 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 JPH3Q8WXH2 748 aaPredicted RBP6.13□□□□□ -1.43
USP54-202ENST00000413442 RERGQ96A58 199 aaPredicted RBP6.13□□□□□ -1.43
USP54-202ENST00000413442 GBP5Q96PP8 586 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 PKP4Q99569 1192 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 SELENOSQ9BQE4 189 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 DPH7Q9BTV6 452 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 TGIF2Q9GZN2 237 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 CNOT10Q9H9A5 744 aaKnown RBP6.13□□□□□ -1.43
USP54-202ENST00000413442 ZNF304Q9HCX3 659 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 FAM60AQ9NP50 221 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 CCDC177Q9NQR7 707 aaPredicted RBP6.13□□□□□ -1.43
USP54-202ENST00000413442 SEMA3GQ9NS98 782 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 STARD5Q9NSY2 213 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 IFT80Q9P2H3 777 aaPredicted RBP6.13□□□□□ -1.43
USP54-202ENST00000413442 CHMP2BQ9UQN3 213 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 NFS1Q9Y697 457 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 KCNE2Q9Y6J6 123 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 AHCTF1Q8WYP5 2266 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 SPEGQ15772 3267 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 IGLV3-12A0A075B6K2 115 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 FAM159BA6NKW6 160 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 NKX2-8O15522 239 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 RAD51CO43502 376 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 H2AFYO75367 372 aaKnown RBP6.12□□□□□ -1.43
USP54-202ENST00000413442 RFPL1O75677 317 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 TIAF1O95411 115 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 CAPN1P07384 714 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 MYBL2P10244 700 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 NPPBP16860 134 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 STMN1P16949 149 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 ZNF37AP17032 561 aaPredicted RBP6.12□□□□□ -1.43
USP54-202ENST00000413442 ALAS2P22557 587 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 MMP11P24347 488 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 MCM3P25205 808 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 CRABP2P29373 138 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 PEBP1P30086 187 aaKnown RBP6.12□□□□□ -1.43
USP54-202ENST00000413442 AHRP35869 848 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 GGT5P36269 586 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 FOLR3P41439 243 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 MAGEA4P43358 317 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 PLTPP55058 493 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 POLE2P56282 527 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 GUCY2DQ02846 1103 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 OCA2Q04671 838 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 KCNAB2Q13303 367 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 PWP1Q13610 501 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 CUL1Q13616 776 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 ERV3-1Q14264 604 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms