RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 TSPEARQ8WU66 669 aa16.63■□□□□ 0.25
PTPRC-206ENST00000413409 TMEM79Q9BSE2 394 aa16.63■□□□□ 0.25
PTPRC-206ENST00000413409 TACO1Q9BSH4 297 aaKnown RBP16.63■□□□□ 0.25
PTPRC-206ENST00000413409 BTBD1Q9H0C5 482 aa16.63■□□□□ 0.25
PTPRC-206ENST00000413409 SDR39U1Q9NRG7 319 aaPredicted RBP16.63■□□□□ 0.25
PTPRC-206ENST00000413409 AIG1Q9NVV5 245 aa16.63■□□□□ 0.25
PTPRC-206ENST00000413409 WWOXQ9NZC7 414 aa16.63■□□□□ 0.25
PTPRC-206ENST00000413409 ADAMTS6Q9UKP5 1117 aa16.63■□□□□ 0.25
PTPRC-206ENST00000413409 BTRCQ9Y297 605 aa16.63■□□□□ 0.25
PTPRC-206ENST00000413409 ATP6AP2A0A1C7CYW4 349 aa16.62■□□□□ 0.25
PTPRC-206ENST00000413409 C16orf96A6NNT2 1141 aa16.62■□□□□ 0.25
PTPRC-206ENST00000413409 OR7A17O14581 309 aa16.62■□□□□ 0.25
PTPRC-206ENST00000413409 ATP6AP2O75787 350 aa16.62■□□□□ 0.25
PTPRC-206ENST00000413409 FTH1P02794 183 aa16.62■□□□□ 0.25
PTPRC-206ENST00000413409 CKMT2P17540 419 aa16.62■□□□□ 0.25
PTPRC-206ENST00000413409 MSH3P20585 1137 aa16.62■□□□□ 0.25
PTPRC-206ENST00000413409 ITGB7P26010 798 aa16.62■□□□□ 0.25
PTPRC-206ENST00000413409 EPHA8P29322 1005 aaPredicted RBP16.62■□□□□ 0.25
PTPRC-206ENST00000413409 PRDX3P30048 256 aaKnown RBP16.62■□□□□ 0.25
PTPRC-206ENST00000413409 AKT1P31749 480 aa16.62■□□□□ 0.25
PTPRC-206ENST00000413409 ERVPABLB-1P60509 514 aa16.62■□□□□ 0.25
PTPRC-206ENST00000413409 TRAF3Q13114 568 aa16.62■□□□□ 0.25
PTPRC-206ENST00000413409 LRP8Q14114 963 aa16.62■□□□□ 0.25
PTPRC-206ENST00000413409 GRB7Q14451 532 aa16.62■□□□□ 0.25
PTPRC-206ENST00000413409 HNRNPA1L2Q32P51 320 aaKnown RBP16.62■□□□□ 0.25
PTPRC-206ENST00000413409 LETMD1Q6P1Q0 360 aa16.62■□□□□ 0.25
PTPRC-206ENST00000413409 LRRC74BQ6ZQY2 392 aa16.62■□□□□ 0.25
PTPRC-206ENST00000413409 KANSL1Q7Z3B3 1105 aa16.62■□□□□ 0.25
PTPRC-206ENST00000413409 TECPR1Q7Z6L1 1165 aa16.62■□□□□ 0.25
PTPRC-206ENST00000413409 HPS6Q86YV9 775 aa16.62■□□□□ 0.25
PTPRC-206ENST00000413409 TMIEQ8NEW7 156 aa16.62■□□□□ 0.25
PTPRC-206ENST00000413409 ROPN1LQ96C74 230 aa16.62■□□□□ 0.25
PTPRC-206ENST00000413409 RHBDF1Q96CC6 855 aa16.62■□□□□ 0.25
PTPRC-206ENST00000413409 CCDC124Q96CT7 223 aaKnown RBP16.62■□□□□ 0.25
PTPRC-206ENST00000413409 NPAS2Q99743 824 aa16.62■□□□□ 0.25
PTPRC-206ENST00000413409 CD244Q9BZW8 370 aa16.62■□□□□ 0.25
PTPRC-206ENST00000413409 BRINP2Q9C0B6 783 aa16.62■□□□□ 0.25
PTPRC-206ENST00000413409 NOL11Q9H8H0 719 aaKnown RBP16.62■□□□□ 0.25
PTPRC-206ENST00000413409 S100A14Q9HCY8 104 aa16.62■□□□□ 0.25
PTPRC-206ENST00000413409 PTGDR2Q9Y5Y4 395 aa16.62■□□□□ 0.25
PTPRC-206ENST00000413409 K7ENP7 123 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 K7EPI3 171 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 TRIM38O00635 465 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 FBP2O00757 339 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 MRASO14807 208 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 TAPBPO15533 448 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 NRP2O60462 931 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 DXOO77932 396 aaKnown RBP16.61■□□□□ 0.25
PTPRC-206ENST00000413409 WDR47O94967 919 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 OR4F21O95013 312 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 LINC00032P0C843 101 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 HGFP14210 728 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 ANPEPP15144 967 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 CCR7P32248 378 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 PSME3P61289 254 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 RPS14P62263 151 aaKnown RBP16.61■□□□□ 0.25
PTPRC-206ENST00000413409 ERVK-8P63133 956 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 PHKG1Q16816 387 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 MMEL1Q495T6 779 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 PDCD4Q53EL6 469 aaKnown RBP16.61■□□□□ 0.25
PTPRC-206ENST00000413409 FNDC3BQ53EP0 1204 aaKnown RBP16.61■□□□□ 0.25
PTPRC-206ENST00000413409 FBXO48Q5FWF7 155 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 LDLRAP1Q5SW96 308 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 C8orf82Q6P1X6 216 aaPredicted RBP16.61■□□□□ 0.25
PTPRC-206ENST00000413409 PRMT9Q6P2P2 845 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 INO80CQ6PI98 192 aaPredicted RBP16.61■□□□□ 0.25
PTPRC-206ENST00000413409 SERPINA13PQ6UXR4 307 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 ZNF765Q7L2R6 523 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 LRRC70Q7Z2Q7 622 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 RASGRP3Q8IV61 690 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 ZNF366Q8N895 744 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 PCYOX1LQ8NBM8 494 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 OR52B6Q8NGF0 335 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 UCMAQ8WVF2 138 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 OR8D1Q8WZ84 308 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 EGFL8Q99944 293 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 SLC29A3Q9BZD2 475 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 FAM117AQ9C073 453 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 ASCL3Q9NQ33 180 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 CCDC167Q9P0B6 97 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 OPTCQ9UBM4 332 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 TRPS1Q9UHF7 1281 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 NDUFAF1Q9Y375 327 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 TIMM22Q9Y584 194 aa16.61■□□□□ 0.25
PTPRC-206ENST00000413409 HEMK1Q9Y5R4 338 aaPredicted RBP16.61■□□□□ 0.25
PTPRC-206ENST00000413409 PIKFYVEQ9Y2I7 2098 aa16.6■□□□□ 0.25
PTPRC-206ENST00000413409 ANKRD17O75179 2603 aaKnown RBP16.6■□□□□ 0.25
PTPRC-206ENST00000413409 A0A1W2PPC4 97 aa16.6■□□□□ 0.25
PTPRC-206ENST00000413409 A0A1W2PR77 199 aa16.6■□□□□ 0.25
PTPRC-206ENST00000413409 ANXA5P08758 320 aa16.6■□□□□ 0.25
PTPRC-206ENST00000413409 ELFN1P0C7U0 828 aa16.6■□□□□ 0.25
PTPRC-206ENST00000413409 ME2P23368 584 aa16.6■□□□□ 0.25
PTPRC-206ENST00000413409 GGT5P36269 586 aa16.6■□□□□ 0.25
PTPRC-206ENST00000413409 HSPA7P48741 367 aa16.6■□□□□ 0.25
PTPRC-206ENST00000413409 THOP1P52888 689 aa16.6■□□□□ 0.25
PTPRC-206ENST00000413409 GABREP78334 506 aa16.6■□□□□ 0.25
PTPRC-206ENST00000413409 ELP6Q0PNE2 266 aa16.6■□□□□ 0.25
PTPRC-206ENST00000413409 SMU1Q2TAY7 513 aa16.6■□□□□ 0.25
PTPRC-206ENST00000413409 PROX2Q3B8N5 592 aa16.6■□□□□ 0.25
PTPRC-206ENST00000413409 TCHHL1Q5QJ38 904 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms