RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 ARHGEF33A8MVX0 844 aa18.35■□□□□ 0.53
CPSF7-204ENST00000413232 KPNA5O15131 536 aa18.35■□□□□ 0.53
CPSF7-204ENST00000413232 SRPX2O60687 465 aaPredicted RBP18.35■□□□□ 0.53
CPSF7-204ENST00000413232 IPO13O94829 963 aaKnown RBP18.35■□□□□ 0.53
CPSF7-204ENST00000413232 FKBP9O95302 570 aa18.35■□□□□ 0.53
CPSF7-204ENST00000413232 PIM1P11309 404 aaPredicted RBP18.35■□□□□ 0.53
CPSF7-204ENST00000413232 VARSP26640 1264 aaKnown RBP18.35■□□□□ 0.53
CPSF7-204ENST00000413232 COL8A1P27658 744 aa18.35■□□□□ 0.53
CPSF7-204ENST00000413232 GLRBP48167 497 aa18.35■□□□□ 0.53
CPSF7-204ENST00000413232 FAM214AQ32MH5 1076 aa18.35■□□□□ 0.53
CPSF7-204ENST00000413232 SUSD1Q6UWL2 747 aa18.35■□□□□ 0.53
CPSF7-204ENST00000413232 IGFL2Q6UWQ7 119 aa18.35■□□□□ 0.53
CPSF7-204ENST00000413232 CENPUQ71F23 418 aa18.35■□□□□ 0.53
CPSF7-204ENST00000413232 RNF44Q7L0R7 432 aa18.35■□□□□ 0.53
CPSF7-204ENST00000413232 GSTA5Q7RTV2 222 aa18.35■□□□□ 0.53
CPSF7-204ENST00000413232 PRELID2Q8N945 189 aa18.35■□□□□ 0.53
CPSF7-204ENST00000413232 TTC29Q8NA56 475 aaPredicted RBP18.35■□□□□ 0.53
CPSF7-204ENST00000413232 OR11G2Q8NGC1 345 aa18.35■□□□□ 0.53
CPSF7-204ENST00000413232 C10orf90Q96M02 699 aa18.35■□□□□ 0.53
CPSF7-204ENST00000413232 SLC30A3Q99726 388 aa18.35■□□□□ 0.53
CPSF7-204ENST00000413232 COPG1Q9Y678 874 aaKnown RBP18.35■□□□□ 0.53
CPSF7-204ENST00000413232 CROCCQ5TZA2 2017 aa18.35■□□□□ 0.53
CPSF7-204ENST00000413232 SCN2AQ99250 2005 aa18.34■□□□□ 0.53
CPSF7-204ENST00000413232 IGKV1-8A0A0C4DH67 115 aa18.34■□□□□ 0.53
CPSF7-204ENST00000413232 OR2A25A4D2G3 310 aa18.34■□□□□ 0.53
CPSF7-204ENST00000413232 EIF2S1P05198 315 aaKnown RBP18.34■□□□□ 0.53
CPSF7-204ENST00000413232 ERGP11308 486 aa18.34■□□□□ 0.53
CPSF7-204ENST00000413232 TPSB2P20231 275 aa18.34■□□□□ 0.53
CPSF7-204ENST00000413232 KLC1Q07866 573 aa18.34■□□□□ 0.53
CPSF7-204ENST00000413232 KCNJ11Q14654 390 aa18.34■□□□□ 0.53
CPSF7-204ENST00000413232 TPSAB1Q15661 275 aa18.34■□□□□ 0.53
CPSF7-204ENST00000413232 ANKRD22Q5VYY1 191 aa18.34■□□□□ 0.53
CPSF7-204ENST00000413232 C4orf22Q6V702 233 aa18.34■□□□□ 0.53
CPSF7-204ENST00000413232 LAPTM4BQ86VI4 370 aa18.34■□□□□ 0.53
CPSF7-204ENST00000413232 LURAP1LQ8IV03 231 aa18.34■□□□□ 0.53
CPSF7-204ENST00000413232 PRSS58Q8IYP2 241 aa18.34■□□□□ 0.53
CPSF7-204ENST00000413232 AMER2Q8N7J2 671 aa18.34■□□□□ 0.53
CPSF7-204ENST00000413232 STT3BQ8TCJ2 826 aa18.34■□□□□ 0.53
CPSF7-204ENST00000413232 DPH7Q9BTV6 452 aa18.34■□□□□ 0.53
CPSF7-204ENST00000413232 ZKSCAN5Q9Y2L8 839 aa18.34■□□□□ 0.53
CPSF7-204ENST00000413232 ANKUB1A6NFN9 424 aa18.33■□□□□ 0.52
CPSF7-204ENST00000413232 H0YGG7 62 aa18.33■□□□□ 0.52
CPSF7-204ENST00000413232 CEP104O60308 925 aa18.33■□□□□ 0.52
CPSF7-204ENST00000413232 CLDN1O95832 211 aa18.33■□□□□ 0.52
CPSF7-204ENST00000413232 LDLRP01130 860 aa18.33■□□□□ 0.52
CPSF7-204ENST00000413232 CCNFP41002 786 aa18.33■□□□□ 0.52
CPSF7-204ENST00000413232 VPS41P49754 854 aa18.33■□□□□ 0.52
CPSF7-204ENST00000413232 ARF3P61204 181 aaPredicted RBP18.33■□□□□ 0.52
CPSF7-204ENST00000413232 RBBP7Q16576 425 aa18.33■□□□□ 0.52
CPSF7-204ENST00000413232 PRTGQ2VWP7 1150 aa18.33■□□□□ 0.52
CPSF7-204ENST00000413232 KLHL38Q2WGJ6 581 aa18.33■□□□□ 0.52
CPSF7-204ENST00000413232 VWA2Q5GFL6 755 aa18.33■□□□□ 0.52
CPSF7-204ENST00000413232 MRNIPQ6NTE8 343 aa18.33■□□□□ 0.52
CPSF7-204ENST00000413232 MYO7BQ6PIF6 2116 aa18.33■□□□□ 0.52
CPSF7-204ENST00000413232 CAND1Q86VP6 1230 aaKnown RBP18.33■□□□□ 0.52
CPSF7-204ENST00000413232 OR9A1PQ8NGU1 263 aa18.33■□□□□ 0.52
CPSF7-204ENST00000413232 C8orf44Q96CB5 159 aa18.33■□□□□ 0.52
CPSF7-204ENST00000413232 FOPNLQ96NB1 174 aa18.33■□□□□ 0.52
CPSF7-204ENST00000413232 WDR77Q9BQA1 342 aaPredicted RBP18.33■□□□□ 0.52
CPSF7-204ENST00000413232 ZNF304Q9HCX3 659 aa18.33■□□□□ 0.52
CPSF7-204ENST00000413232 SPATA7Q9P0W8 599 aa18.33■□□□□ 0.52
CPSF7-204ENST00000413232 NOVA2Q9UNW9 492 aaKnown RBP18.33■□□□□ 0.52
CPSF7-204ENST00000413232 MED16Q9Y2X0 877 aa18.33■□□□□ 0.52
CPSF7-204ENST00000413232 CPAMD8Q8IZJ3 1885 aa18.33■□□□□ 0.52
CPSF7-204ENST00000413232 FFAR3O14843 346 aa18.32■□□□□ 0.52
CPSF7-204ENST00000413232 GPR42O15529 346 aa18.32■□□□□ 0.52
CPSF7-204ENST00000413232 KLHL41O60662 606 aa18.32■□□□□ 0.52
CPSF7-204ENST00000413232 PSIP1O75475 530 aaKnown RBP18.32■□□□□ 0.52
CPSF7-204ENST00000413232 KLHL18O94889 574 aa18.32■□□□□ 0.52
CPSF7-204ENST00000413232 ESR1P03372 595 aa18.32■□□□□ 0.52
CPSF7-204ENST00000413232 ZGLP1P0C6A0 271 aa18.32■□□□□ 0.52
CPSF7-204ENST00000413232 CHRM3P20309 590 aa18.32■□□□□ 0.52
CPSF7-204ENST00000413232 ADARP55265 1226 aaKnown RBP18.32■□□□□ 0.52
CPSF7-204ENST00000413232 SNRPNP63162 240 aaKnown RBP18.32■□□□□ 0.52
CPSF7-204ENST00000413232 CDK16Q00536 496 aa18.32■□□□□ 0.52
CPSF7-204ENST00000413232 TUBB8Q3ZCM7 444 aa18.32■□□□□ 0.52
CPSF7-204ENST00000413232 KIAA0930Q6ICG6 404 aaPredicted RBP18.32■□□□□ 0.52
CPSF7-204ENST00000413232 TTC27Q6P3X3 843 aa18.32■□□□□ 0.52
CPSF7-204ENST00000413232 ZNF662Q6ZS27 426 aa18.32■□□□□ 0.52
CPSF7-204ENST00000413232 SDCCAG8Q86SQ7 713 aaPredicted RBP18.32■□□□□ 0.52
CPSF7-204ENST00000413232 CILP2Q8IUL8 1156 aa18.32■□□□□ 0.52
CPSF7-204ENST00000413232 GIMAP7Q8NHV1 300 aa18.32■□□□□ 0.52
CPSF7-204ENST00000413232 PPP4R1Q8TF05 950 aa18.32■□□□□ 0.52
CPSF7-204ENST00000413232 TM9SF4Q92544 642 aa18.32■□□□□ 0.52
CPSF7-204ENST00000413232 THOC3Q96J01 351 aaKnown RBP18.32■□□□□ 0.52
CPSF7-204ENST00000413232 TCF12Q99081 682 aa18.32■□□□□ 0.52
CPSF7-204ENST00000413232 PKP4Q99569 1192 aa18.32■□□□□ 0.52
CPSF7-204ENST00000413232 ZFYVE21Q9BQ24 234 aa18.32■□□□□ 0.52
CPSF7-204ENST00000413232 CRB3Q9BUF7 120 aa18.32■□□□□ 0.52
CPSF7-204ENST00000413232 SEMA3GQ9NS98 782 aa18.32■□□□□ 0.52
CPSF7-204ENST00000413232 NXT1Q9UKK6 140 aaKnown RBP18.32■□□□□ 0.52
CPSF7-204ENST00000413232 MYO1CO00159 1063 aa18.31■□□□□ 0.52
CPSF7-204ENST00000413232 AP3B1O00203 1094 aa18.31■□□□□ 0.52
CPSF7-204ENST00000413232 DDAH2O95865 285 aa18.31■□□□□ 0.52
CPSF7-204ENST00000413232 PKMP14618 531 aaKnown RBP18.31■□□□□ 0.52
CPSF7-204ENST00000413232 OGNP20774 298 aaKnown RBP18.31■□□□□ 0.52
CPSF7-204ENST00000413232 ATP5DP30049 168 aa18.31■□□□□ 0.52
CPSF7-204ENST00000413232 MAGEA6P43360 314 aa18.31■□□□□ 0.52
CPSF7-204ENST00000413232 CLCN7P51798 805 aa18.31■□□□□ 0.52
CPSF7-204ENST00000413232 AGAP7PQ5VUJ5 663 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms