RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 DHDHQ9UQ10 334 aa-1.73□□□□□ -2.69
RNU4-88P-201ENST00000411220 LAS1LQ9Y4W2 734 aaKnown RBP-1.73□□□□□ -2.69
RNU4-88P-201ENST00000411220 PCDHGB5Q9Y5G0 923 aa-1.73□□□□□ -2.69
RNU4-88P-201ENST00000411220 ASCC3Q8N3C0 2202 aaKnown RBP-1.73□□□□□ -2.69
RNU4-88P-201ENST00000411220 TTC21AQ8NDW8 1320 aa-1.73□□□□□ -2.69
RNU4-88P-201ENST00000411220 TSC2P49815 1807 aa-1.73□□□□□ -2.69
RNU4-88P-201ENST00000411220 PPIAL4EA0A075B759 164 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 PPIAL4CA0A0B4J2A2 164 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 A0A1W2PPM1 405 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 CTAGE9A4FU28 777 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 MEIS3P1A6NDR6 274 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 PABPN1LA6NDY0 278 aaKnown RBP-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 TRIM75PA6NK02 468 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 FAM90A7PA6NKC0 464 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 YDJCA8MPS7 323 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 NPIPB5A8MRT5 1133 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 FAM90A22PA8MWA6 464 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 FAM90A12PA8MX19 464 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 FAM90A23PA8MXZ1 464 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 NPIPB4C9JG80 1138 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 PPIAL4DF5H284 164 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 K7ESF4 209 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 M0QZ24 198 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 GEMIN2O14893 280 aaKnown RBP-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 NCAM2O15394 837 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 GPAA1O43292 621 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 RIPK2O43353 540 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 EPB41L2O43491 1005 aaKnown RBP-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 SYNGR1O43759 233 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 EIF4E2O60573 245 aaKnown RBP-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 PLA2G6O60733 806 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 PQBP1O60828 265 aaKnown RBP-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 NDUFS7O75251 213 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 GPR32O75388 356 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 PMPCBO75439 489 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 MPZL1O95297 269 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 CTDNEP1O95476 244 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 EML2O95834 649 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 SLC25A27O95847 323 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 HLA-DQA2P01906 255 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 TRGV3P03979 118 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 HSP90AA1P07900 732 aaKnown RBP-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 SERPINF2P08697 491 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 CTSHP09668 335 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 CCDC166P0CW27 439 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 PPIAL4FP0DN26 164 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 DEFA4P12838 97 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 UNGP13051 313 aaPredicted RBP-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 GNLYP22749 145 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 OXTRP30559 389 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 SRIP30626 198 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 CCR2P41597 374 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 MXI1P50539 228 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 PAX9P55771 341 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 TMEM50BP56557 158 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 RPL15P61313 204 aaKnown RBP-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 KCNJ10P78508 379 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 KIF23Q02241 960 aaPredicted RBP-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 AP1B1Q10567 949 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 SMARCB1Q12824 385 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 CHIT1Q13231 466 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 RIPK1Q13546 671 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 PDE6HQ13956 83 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 ARHGEF7Q14155 803 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 NAB2Q15742 525 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 C4orf26Q17RF5 130 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 DEFB116Q30KQ4 102 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 KIAA1644Q3SXP7 199 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 MOGAT2Q3SYC2 334 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 CCDC14Q49A88 953 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 ARHGAP29Q52LW3 1261 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 PLA1AQ53H76 456 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 LACTB2Q53H82 288 aaPredicted RBP-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 EEF1AKMT2Q5JPI9 291 aaKnown RBP-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 FAM83BQ5T0W9 1011 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 PDSS1Q5T2R2 415 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 BEND3Q5T5X7 828 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 C9orf66Q5T8R8 295 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 MANEALQ5VSG8 457 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 IRAK1BP1Q5VVH5 260 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 SUSD4Q5VX71 490 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 RAP1GAP2Q684P5 730 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 CHST3Q7LGC8 479 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 VMO1Q7Z5L0 202 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 NT5DC3Q86UY8 548 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 ZNF573Q86YE8 665 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 CAMK1DQ8IU85 385 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 FBXO16Q8IX29 292 aaPredicted RBP-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 CTAGE4Q8IX94 777 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 ZGPATQ8N5A5 531 aaKnown RBP-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 GVQW1Q8N7I0 195 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 DDX51Q8N8A6 666 aaKnown RBP eCLIP-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 SNX31Q8N9S9 440 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 NPEPL1Q8NDH3 523 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 GPT2Q8TD30 523 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 GANCQ8TET4 914 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 STARD8Q92502 1023 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 HAS2Q92819 552 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 SLC5A5Q92911 643 aa-1.74□□□□□ -2.69
RNU4-88P-201ENST00000411220 FAM131CQ96AQ9 280 aa-1.74□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms