RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 NOXRED1Q6NXP6 359 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 ADAMTSL4Q6UY14 1074 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 LPCAT2Q7L5N7 544 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 GPR149Q86SP6 731 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 GPR180Q86V85 440 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 IFNEQ86WN2 208 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 C12orf40Q86WS4 652 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 GALNT4Q8N4A0 578 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 PHC3Q8NDX5 983 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 WDR20Q8TBZ3 569 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 HM13Q8TCT9 377 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 CXorf40AQ8TE69 158 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 SETD7Q8WTS6 366 aaKnown RBP13.17□□□□□ -0.3
LIMS1-205ENST00000410093 UBE2E3Q969T4 207 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 BIRC7Q96CA5 298 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 RSPRY1Q96DX4 576 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 PPM1MQ96MI6 270 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 HBEGFQ99075 208 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 HAUS8Q9BT25 410 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 EFCAB11Q9BUY7 163 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 ANKRD60Q9BZ19 345 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 MAGIXQ9H6Y5 334 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 ZFP14Q9HCL3 533 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 FAM120CQ9NX05 1096 aaKnown RBP13.17□□□□□ -0.3
LIMS1-205ENST00000410093 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.17□□□□□ -0.3
LIMS1-205ENST00000410093 TRBV5-3A0A0A0MS03 114 aa13.16□□□□□ -0.3
LIMS1-205ENST00000410093 ELOVL7A1L3X0 281 aa13.16□□□□□ -0.3
LIMS1-205ENST00000410093 MTX2O75431 263 aa13.16□□□□□ -0.3
LIMS1-205ENST00000410093 RASAL1O95294 804 aa13.16□□□□□ -0.3
LIMS1-205ENST00000410093 C1orf105O95561 183 aa13.16□□□□□ -0.3
LIMS1-205ENST00000410093 RPN2P04844 631 aa13.16□□□□□ -0.3
LIMS1-205ENST00000410093 PABPC4LP0CB38 370 aaKnown RBP13.16□□□□□ -0.3
LIMS1-205ENST00000410093 PPIBP23284 216 aaKnown RBP13.16□□□□□ -0.3
LIMS1-205ENST00000410093 RPL3P39023 403 aaKnown RBP13.16□□□□□ -0.3
LIMS1-205ENST00000410093 VIPR2P41587 438 aa13.16□□□□□ -0.3
LIMS1-205ENST00000410093 DGKQP52824 942 aa13.16□□□□□ -0.3
LIMS1-205ENST00000410093 CTSCP53634 463 aa13.16□□□□□ -0.3
LIMS1-205ENST00000410093 PHEXP78562 749 aa13.16□□□□□ -0.3
LIMS1-205ENST00000410093 CHRNB3Q05901 458 aa13.16□□□□□ -0.3
LIMS1-205ENST00000410093 ABHD18Q0P651 414 aa13.16□□□□□ -0.3
LIMS1-205ENST00000410093 ZNF234Q14588 700 aa13.16□□□□□ -0.3
LIMS1-205ENST00000410093 AGERQ15109 404 aa13.16□□□□□ -0.3
LIMS1-205ENST00000410093 ZXDCQ2QGD7 858 aaPredicted RBP13.16□□□□□ -0.3
LIMS1-205ENST00000410093 SPANXN4Q5MJ08 99 aa13.16□□□□□ -0.3
LIMS1-205ENST00000410093 SUSD1Q6UWL2 747 aa13.16□□□□□ -0.3
LIMS1-205ENST00000410093 TMC5Q6UXY8 1006 aa13.16□□□□□ -0.3
LIMS1-205ENST00000410093 CHERPQ8IWX8 916 aaKnown RBP13.16□□□□□ -0.3
LIMS1-205ENST00000410093 RIMKLAQ8IXN7 391 aa13.16□□□□□ -0.3
LIMS1-205ENST00000410093 OR8J2Q8NGG1 315 aa13.16□□□□□ -0.3
LIMS1-205ENST00000410093 NAT14Q8WUY8 206 aa13.16□□□□□ -0.3
LIMS1-205ENST00000410093 NXPE3Q969Y0 559 aa13.16□□□□□ -0.3
LIMS1-205ENST00000410093 ARRDC3Q96B67 414 aa13.16□□□□□ -0.3
LIMS1-205ENST00000410093 ZNF583Q96ND8 569 aa13.16□□□□□ -0.3
LIMS1-205ENST00000410093 RDH12Q96NR8 316 aa13.16□□□□□ -0.3
LIMS1-205ENST00000410093 FAM129BQ96TA1 746 aa13.16□□□□□ -0.3
LIMS1-205ENST00000410093 PRPF18Q99633 342 aaKnown RBP13.16□□□□□ -0.3
LIMS1-205ENST00000410093 THUMPD3Q9BV44 507 aaKnown RBP13.16□□□□□ -0.3
LIMS1-205ENST00000410093 PHF7Q9BWX1 381 aaPredicted RBP13.16□□□□□ -0.3
LIMS1-205ENST00000410093 SEMA6AQ9H2E6 1030 aa13.16□□□□□ -0.3
LIMS1-205ENST00000410093 PNPLA3Q9NST1 481 aa13.16□□□□□ -0.3
LIMS1-205ENST00000410093 OLAHQ9NV23 265 aa13.16□□□□□ -0.3
LIMS1-205ENST00000410093 SLAMF8Q9P0V8 285 aa13.16□□□□□ -0.3
LIMS1-205ENST00000410093 THAP10Q9P2Z0 257 aaPredicted RBP13.16□□□□□ -0.3
LIMS1-205ENST00000410093 ZNF639Q9UID6 485 aa13.16□□□□□ -0.3
LIMS1-205ENST00000410093 MBD1Q9UIS9 605 aaPredicted RBP13.16□□□□□ -0.3
LIMS1-205ENST00000410093 PPT2Q9UMR5 302 aa13.16□□□□□ -0.3
LIMS1-205ENST00000410093 CORO2BQ9UQ03 480 aa13.16□□□□□ -0.3
LIMS1-205ENST00000410093 GMEB1Q9Y692 573 aa13.16□□□□□ -0.3
LIMS1-205ENST00000410093 EVPLLA8MZ36 301 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 FOXE1O00358 373 aaPredicted RBP13.15□□□□□ -0.3
LIMS1-205ENST00000410093 LILRB5O75023 590 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 C6P13671 934 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 SDC1P18827 310 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 HRH2P25021 359 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 GRIA2P42262 883 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 KIR3DL1P43629 444 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 RPL5P46777 297 aaKnown RBP13.15□□□□□ -0.3
LIMS1-205ENST00000410093 EPS8Q12929 822 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 NAE1Q13564 534 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 MYBPC3Q14896 1274 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 HIST2H2ACQ16777 129 aaPredicted RBP13.15□□□□□ -0.3
LIMS1-205ENST00000410093 LIN52Q52LA3 116 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 NHSL2Q5HYW2 709 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.15□□□□□ -0.3
LIMS1-205ENST00000410093 TMEM31Q5JXX7 168 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 FAM219BQ5XKK7 198 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 HIST2H2AA3Q6FI13 130 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 RAET1GQ6H3X3 334 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 ERICH5Q6P6B1 374 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 AMIGO2Q86SJ2 522 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 CARM1Q86X55 608 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 YAF2Q8IY57 180 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 EID3Q8N140 333 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 PGBD3Q8N328 593 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 VPS37AQ8NEZ2 397 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 OR9A1PQ8NGU1 263 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 OR2L2Q8NH16 312 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 NELL1Q92832 810 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 HIC2Q96JB3 615 aa13.15□□□□□ -0.3
LIMS1-205ENST00000410093 CNBD2Q96M20 576 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms