RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 DEFB110Q30KQ9 67 aa10.48□□□□□ -0.73
CHMP3-205ENST00000409810 TAF1BQ53T94 588 aaPredicted RBP10.48□□□□□ -0.73
CHMP3-205ENST00000409810 TCTE1Q5JU00 501 aa10.48□□□□□ -0.73
CHMP3-205ENST00000409810 PRAMEF13Q5VWM6 474 aa10.48□□□□□ -0.73
CHMP3-205ENST00000409810 CAPN13Q6MZZ7 669 aaPredicted RBP10.48□□□□□ -0.73
CHMP3-205ENST00000409810 C19orf48Q6RUI8 117 aa10.48□□□□□ -0.73
CHMP3-205ENST00000409810 AGTRAPQ6RW13 159 aa10.48□□□□□ -0.73
CHMP3-205ENST00000409810 SBSNQ6UWP8 590 aa10.48□□□□□ -0.73
CHMP3-205ENST00000409810 TMEM207Q6UWW9 146 aa10.48□□□□□ -0.73
CHMP3-205ENST00000409810 CCDC81Q6ZN84 652 aa10.48□□□□□ -0.73
CHMP3-205ENST00000409810 FAM20CQ8IXL6 584 aa10.48□□□□□ -0.73
CHMP3-205ENST00000409810 LRRC56Q8IYG6 542 aaPredicted RBP10.48□□□□□ -0.73
CHMP3-205ENST00000409810 DNAJC22Q8N4W6 341 aa10.48□□□□□ -0.73
CHMP3-205ENST00000409810 TTC29Q8NA56 475 aaPredicted RBP10.48□□□□□ -0.73
CHMP3-205ENST00000409810 GALNT6Q8NCL4 622 aa10.48□□□□□ -0.73
CHMP3-205ENST00000409810 OR1L3Q8NH93 324 aa10.48□□□□□ -0.73
CHMP3-205ENST00000409810 SLC44A1Q8WWI5 657 aa10.48□□□□□ -0.73
CHMP3-205ENST00000409810 FBXL8Q96CD0 374 aa10.48□□□□□ -0.73
CHMP3-205ENST00000409810 CLIP3Q96DZ5 547 aa10.48□□□□□ -0.73
CHMP3-205ENST00000409810 MRRFQ96E11 262 aaKnown RBP10.48□□□□□ -0.73
CHMP3-205ENST00000409810 LRFN5Q96NI6 719 aa10.48□□□□□ -0.73
CHMP3-205ENST00000409810 EGFL8Q99944 293 aa10.48□□□□□ -0.73
CHMP3-205ENST00000409810 SELENOSQ9BQE4 189 aa10.48□□□□□ -0.73
CHMP3-205ENST00000409810 HAUS8Q9BT25 410 aa10.48□□□□□ -0.73
CHMP3-205ENST00000409810 SPRY4Q9C004 299 aa10.48□□□□□ -0.73
CHMP3-205ENST00000409810 ACTR5Q9H9F9 607 aaPredicted RBP10.48□□□□□ -0.73
CHMP3-205ENST00000409810 GPN2Q9H9Y4 310 aaPredicted RBP10.48□□□□□ -0.73
CHMP3-205ENST00000409810 FAM60AQ9NP50 221 aa10.48□□□□□ -0.73
CHMP3-205ENST00000409810 ABCF3Q9NUQ8 709 aa10.48□□□□□ -0.73
CHMP3-205ENST00000409810 EURLQ9NYK6 297 aa10.48□□□□□ -0.73
CHMP3-205ENST00000409810 PADI1Q9ULC6 663 aa10.48□□□□□ -0.73
CHMP3-205ENST00000409810 SRPK3Q9UPE1 567 aa10.48□□□□□ -0.73
CHMP3-205ENST00000409810 SSUH2Q9Y2M2 353 aa10.48□□□□□ -0.73
CHMP3-205ENST00000409810 OARD1Q9Y530 152 aa10.48□□□□□ -0.73
CHMP3-205ENST00000409810 A0A087X1B8 175 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 EXOC1LA0A1B0GW35 172 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 ZSCAN9O15535 394 aaPredicted RBP10.47□□□□□ -0.73
CHMP3-205ENST00000409810 SRPX2O60687 465 aaPredicted RBP10.47□□□□□ -0.73
CHMP3-205ENST00000409810 KRT38O76015 456 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 WISP3O95389 354 aaPredicted RBP10.47□□□□□ -0.73
CHMP3-205ENST00000409810 NTRK1P04629 796 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 CCDC166P0CW27 439 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 CD1DP15813 335 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 AGXTP21549 392 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 SLC26A3P40879 764 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 MSH2P43246 934 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 GABRA4P48169 554 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 HNMTP50135 292 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 VAC14Q08AM6 782 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 NAE1Q13564 534 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 CSHL1Q14406 222 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 LGSNQ5TDP6 509 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 MROH9Q5TGP6 573 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 YOD1Q5VVQ6 348 aaPredicted RBP10.47□□□□□ -0.73
CHMP3-205ENST00000409810 FCRL6Q6DN72 434 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 LCTLQ6UWM7 567 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 MBOAT1Q6ZNC8 495 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 RNF44Q7L0R7 432 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 TIPARPQ7Z3E1 657 aaKnown RBP10.47□□□□□ -0.73
CHMP3-205ENST00000409810 ADCK2Q7Z695 626 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 CMC1Q7Z7K0 106 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 VASH2Q86V25 355 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 C17orf64Q86WR6 236 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 MCATQ8IVS2 390 aaKnown RBP10.47□□□□□ -0.73
CHMP3-205ENST00000409810 SPNS2Q8IVW8 549 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 TCAIMQ8N3R3 496 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 OR56A3Q8NH54 315 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 PROKR1Q8TCW9 393 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 ANKRD49Q8WVL7 239 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 ALKBH8Q96BT7 664 aaKnown RBP10.47□□□□□ -0.73
CHMP3-205ENST00000409810 PAFAH2Q99487 392 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 ZFYVE21Q9BQ24 234 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 C17orf62Q9BQA9 187 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 DPH2Q9BQC3 489 aaPredicted RBP10.47□□□□□ -0.73
CHMP3-205ENST00000409810 PLCD4Q9BRC7 762 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 DPH7Q9BTV6 452 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 NDC1Q9BTX1 674 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 ATG10Q9H0Y0 220 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 NMRAL1Q9HBL8 299 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 SLC6A20Q9NP91 592 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 LHX9Q9NQ69 397 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 TXLNGQ9NUQ3 528 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 ZNF180Q9UJW8 692 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 KCND3Q9UK17 655 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 TLK1Q9UKI8 766 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 SNX7Q9UNH6 387 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 KLHL20Q9Y2M5 609 aa10.47□□□□□ -0.73
CHMP3-205ENST00000409810 KMT2BQ9UMN6 2715 aaPredicted RBP10.47□□□□□ -0.73
CHMP3-205ENST00000409810 DSPP15924 2871 aaKnown RBP10.47□□□□□ -0.73
CHMP3-205ENST00000409810 A0A0J9YVX5 310 aa10.46□□□□□ -0.73
CHMP3-205ENST00000409810 TEX51A0A1B0GUA7 166 aa10.46□□□□□ -0.73
CHMP3-205ENST00000409810 CCDC189A1A4V9 331 aa10.46□□□□□ -0.73
CHMP3-205ENST00000409810 OR2A25A4D2G3 310 aa10.46□□□□□ -0.73
CHMP3-205ENST00000409810 ZNF891A8MT65 544 aaPredicted RBP10.46□□□□□ -0.73
CHMP3-205ENST00000409810 C21orf140B9A014 251 aa10.46□□□□□ -0.73
CHMP3-205ENST00000409810 POC1B-GALNT4F8VUJ3 575 aa10.46□□□□□ -0.73
CHMP3-205ENST00000409810 K7ENP7 123 aa10.46□□□□□ -0.73
CHMP3-205ENST00000409810 CDC7O00311 574 aa10.46□□□□□ -0.73
CHMP3-205ENST00000409810 RIPK2O43353 540 aa10.46□□□□□ -0.73
CHMP3-205ENST00000409810 ZNF749O43361 778 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms