RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 XKR4Q5GH76 650 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 CXorf66Q5JRM2 361 aaPredicted RBP4.2□□□□□ -1.74
CLK1-203ENST00000409769 FRG2Q64ET8 278 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 NOTUMQ6P988 496 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 KCTD18Q6PI47 426 aaPredicted RBP4.2□□□□□ -1.74
CLK1-203ENST00000409769 ALKAL1Q6UXT8 129 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 DSTYKQ6XUX3 929 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 CCNI2Q6ZMN8 369 aaPredicted RBP4.2□□□□□ -1.74
CLK1-203ENST00000409769 C15orf39Q6ZRI6 1047 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 FAM43BQ6ZT52 329 aaPredicted RBP4.2□□□□□ -1.74
CLK1-203ENST00000409769 CATSPER4Q7RTX7 472 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 CDR2LQ86X02 465 aaPredicted RBP4.2□□□□□ -1.74
CLK1-203ENST00000409769 DSELQ8IZU8 1212 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 MUC20Q8N307 709 aaPredicted RBP4.2□□□□□ -1.74
CLK1-203ENST00000409769 ANKRD20A12PQ8NF67 263 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 SPATA22Q8NHS9 363 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 POMGNT1Q8WZA1 660 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 INTS12Q96CB8 462 aaKnown RBP4.2□□□□□ -1.74
CLK1-203ENST00000409769 CCDC51Q96ER9 411 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 PPP1R13BQ96KQ4 1090 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 TMEM68Q96MH6 324 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 PIP5K1AQ99755 562 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 KXD1Q9BQD3 176 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 C1QTNF5Q9BXJ0 243 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 NDST4Q9H3R1 872 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 C11orf49Q9H6J7 331 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 PPP1R3EQ9H7J1 279 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 UBTD1Q9HAC8 227 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 IFNKQ9P0W0 207 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 DLGAP2Q9P1A6 1054 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 ARMCX3Q9UH62 379 aaPredicted RBP4.2□□□□□ -1.74
CLK1-203ENST00000409769 TBX21Q9UL17 535 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 GINS2Q9Y248 185 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 SNX9Q9Y5X1 595 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 PTPRJQ12913 1337 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 UMODL1Q5DID0 1318 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 COL4A6Q14031 1691 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 TTC26A0AVF1 554 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 ZNF233A6NK53 670 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 BUB3O43684 328 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 NOL4O94818 638 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 KDM4BO94953 1096 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 CCNDBP1O95273 360 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 AFPP02771 609 aaKnown RBP4.19□□□□□ -1.74
CLK1-203ENST00000409769 CXCL10P02778 98 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 F7P08709 466 aaPredicted RBP4.19□□□□□ -1.74
CLK1-203ENST00000409769 CLTAP09496 248 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 TRIM49P0CI25 452 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 TRIM49CP0CI26 452 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 STAG3L1P0CL83 205 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 CXCL8P10145 99 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 GHRP10912 638 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 ZNF182P17025 639 aaPredicted RBP4.19□□□□□ -1.74
CLK1-203ENST00000409769 CD52P31358 61 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 GTF2H1P32780 548 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 EIF2S3P41091 472 aaKnown RBP4.19□□□□□ -1.74
CLK1-203ENST00000409769 MTIF2P46199 727 aaKnown RBP4.19□□□□□ -1.74
CLK1-203ENST00000409769 FMO5P49326 533 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 CLCNKAP51800 687 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 SORDQ00796 357 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 UBXN1Q04323 297 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 CCDC173Q0VFZ6 552 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 TMEM115Q12893 351 aaPredicted RBP4.19□□□□□ -1.74
CLK1-203ENST00000409769 CSTF3Q12996 717 aaKnown RBP4.19□□□□□ -1.74
CLK1-203ENST00000409769 ZBTB6Q15916 424 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 TSTQ16762 297 aaKnown RBP4.19□□□□□ -1.74
CLK1-203ENST00000409769 LRRC26Q2I0M4 334 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 KRTAP24-1Q3LI83 254 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 CCDC40Q4G0X9 1142 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 FILIP1LQ4L180 1135 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 CBWD6Q4V339 395 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 EPC2Q52LR7 807 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 SLC45A4Q5BKX6 768 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 CBWD3Q5JTY5 395 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 SLC27A1Q6PCB7 646 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 CACNA2D4Q7Z3S7 1137 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 WDR49Q8IV35 697 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 EFCAB13Q8IY85 973 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 THNSL1Q8IYQ7 743 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 NAGSQ8N159 534 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 PPHLN1Q8NEY8 458 aaKnown RBP4.19□□□□□ -1.74
CLK1-203ENST00000409769 LNX1Q8TBB1 728 aaPredicted RBP4.19□□□□□ -1.74
CLK1-203ENST00000409769 SGCDQ92629 289 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 MPP4Q96JB8 637 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 C3orf30Q96M34 536 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 FAM213AQ9BRX8 229 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 TMEM117Q9H0C3 514 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 ASB7Q9H672 318 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 PLEKHA5Q9HAU0 1116 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 SIX2Q9NPC8 291 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 TCF7L2Q9NQB0 619 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 TMEM30AQ9NV96 361 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 RBAKQ9NYW8 714 aaPredicted RBP4.19□□□□□ -1.74
CLK1-203ENST00000409769 ACSL5Q9ULC5 683 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 TTC7AQ9ULT0 858 aaPredicted RBP4.19□□□□□ -1.74
CLK1-203ENST00000409769 PADI3Q9ULW8 664 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 PIN4Q9Y237 131 aaKnown RBP4.19□□□□□ -1.74
CLK1-203ENST00000409769 COQ4Q9Y3A0 265 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 DNAH12Q6ZR08 3092 aa4.19□□□□□ -1.74
CLK1-203ENST00000409769 TSC2P49815 1807 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms