RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 ACO1P21399 889 aaKnown RBP5.34□□□□□ -1.56
CLK1-202ENST00000409403 FDXRP22570 491 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 EEF1B2P24534 225 aaKnown RBP5.34□□□□□ -1.56
CLK1-202ENST00000409403 FASP25445 335 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 DDOSTP39656 456 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 GARSP41250 739 aaKnown RBP5.34□□□□□ -1.56
CLK1-202ENST00000409403 VIPR2P41587 438 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 NR4A2P43354 598 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 OR3A3P47888 321 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 MAN2A2P49641 1150 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 ETV1P50549 477 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 CYP2J2P51589 502 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 VAMP7P51809 220 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 BNIP2Q12982 314 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 DNASE1L3Q13609 305 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 CEACAM7Q14002 265 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 SQLEQ14534 574 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 COG2Q14746 738 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 NEDD8Q15843 81 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 SLC35G1Q2M3R5 365 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 ASPRV1Q53RT3 343 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 MTX3Q5HYI7 312 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 FNBP1LQ5T0N5 605 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 AGAP6Q5VW22 663 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 METRNLQ641Q3 311 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 PRMT9Q6P2P2 845 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 CYS1Q717R9 158 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 ZNF767PQ75MW2 155 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 RNF44Q7L0R7 432 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 KCTD20Q7Z5Y7 419 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 CATSPER3Q86XQ3 398 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 AQP12AQ8IXF9 295 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 ZNF444Q8N0Y2 327 aaPredicted RBP5.34□□□□□ -1.56
CLK1-202ENST00000409403 SCML4Q8N228 414 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 CLIP4Q8N3C7 705 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 TMEM105Q8N8V8 129 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 OR7A2PQ8NGA2 310 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 OR6Q1Q8NGQ2 317 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 Q8TCH9 128 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 BLOC1S5Q8TDH9 187 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 ATP6V1E2Q96A05 226 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 SPSB4Q96A44 273 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 HDAC11Q96DB2 347 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 METTL2AQ96IZ6 378 aaKnown RBP5.34□□□□□ -1.56
CLK1-202ENST00000409403 RDH12Q96NR8 316 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 AGAP4Q96P64 663 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 MOGAT1Q96PD6 335 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 LENG8Q96PV6 779 aaPredicted RBP5.34□□□□□ -1.56
CLK1-202ENST00000409403 NEU1Q99519 415 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 SMOQ99835 787 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 CNPY3Q9BT09 278 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 CENPOQ9BU64 300 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 TEX13BQ9BXU2 312 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 MTMR12Q9C0I1 747 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 MS4A7Q9GZW8 240 aaPredicted RBP5.34□□□□□ -1.56
CLK1-202ENST00000409403 TMEM117Q9H0C3 514 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 KCNN2Q9H2S1 579 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 TMEM206Q9H813 350 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 RAVER2Q9HCJ3 691 aaKnown RBP5.34□□□□□ -1.56
CLK1-202ENST00000409403 IL17RBQ9NRM6 502 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 SMOXQ9NWM0 555 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 PAK1IP1Q9NWT1 392 aaPredicted RBP5.34□□□□□ -1.56
CLK1-202ENST00000409403 DUS2Q9NX74 493 aaKnown RBP5.34□□□□□ -1.56
CLK1-202ENST00000409403 PI4KBQ9UBF8 816 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 ZNF70Q9UC06 446 aaPredicted RBP5.34□□□□□ -1.56
CLK1-202ENST00000409403 WARS2Q9UGM6 360 aaKnown RBP5.34□□□□□ -1.56
CLK1-202ENST00000409403 CFL2Q9Y281 166 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 TEX264Q9Y6I9 313 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 A3GALT2U3KPV4 340 aa5.34□□□□□ -1.56
CLK1-202ENST00000409403 BAZ2AQ9UIF9 1905 aaKnown RBP5.33□□□□□ -1.56
CLK1-202ENST00000409403 PTPN13Q12923 2485 aa5.33□□□□□ -1.56
CLK1-202ENST00000409403 hCG_1818297A0A087WSY0 165 aa5.33□□□□□ -1.56
CLK1-202ENST00000409403 CYP3A7-CYP3A51PA0A087WV96 503 aa5.33□□□□□ -1.56
CLK1-202ENST00000409403 PNMA8CA0A1B0GUJ8 204 aa5.33□□□□□ -1.56
CLK1-202ENST00000409403 A0A1W2PQ67 120 aa5.33□□□□□ -1.56
CLK1-202ENST00000409403 FAM170AA1A519 330 aa5.33□□□□□ -1.56
CLK1-202ENST00000409403 DIRC3C9JPN6 131 aa5.33□□□□□ -1.56
CLK1-202ENST00000409403 GOLGA8SH3BPF8 625 aa5.33□□□□□ -1.56
CLK1-202ENST00000409403 ANGPT2O15123 496 aa5.33□□□□□ -1.56
CLK1-202ENST00000409403 NMT2O60551 498 aa5.33□□□□□ -1.56
CLK1-202ENST00000409403 PLIN3O60664 434 aa5.33□□□□□ -1.56
CLK1-202ENST00000409403 ZNF623O75123 536 aa5.33□□□□□ -1.56
CLK1-202ENST00000409403 UGT2B11O75310 529 aa5.33□□□□□ -1.56
CLK1-202ENST00000409403 GABARAPO95166 117 aa5.33□□□□□ -1.56
CLK1-202ENST00000409403 SEC24AO95486 1093 aa5.33□□□□□ -1.56
CLK1-202ENST00000409403 TIMP1P01033 207 aa5.33□□□□□ -1.56
CLK1-202ENST00000409403 APOA4P06727 396 aa5.33□□□□□ -1.56
CLK1-202ENST00000409403 GPIP06744 558 aa5.33□□□□□ -1.56
CLK1-202ENST00000409403 PROS1P07225 676 aa5.33□□□□□ -1.56
CLK1-202ENST00000409403 TRIM49P0CI25 452 aa5.33□□□□□ -1.56
CLK1-202ENST00000409403 TRIM49CP0CI26 452 aa5.33□□□□□ -1.56
CLK1-202ENST00000409403 CYP2D6P10635 497 aa5.33□□□□□ -1.56
CLK1-202ENST00000409403 PRKACAP17612 351 aa5.33□□□□□ -1.56
CLK1-202ENST00000409403 TCN1P20061 433 aaPredicted RBP5.33□□□□□ -1.56
CLK1-202ENST00000409403 CYP3A7P24462 503 aa5.33□□□□□ -1.56
CLK1-202ENST00000409403 PSMA4P25789 261 aaKnown RBP5.33□□□□□ -1.56
CLK1-202ENST00000409403 ATICP31939 592 aa5.33□□□□□ -1.56
CLK1-202ENST00000409403 APOBEC3AP31941 199 aaPredicted RBP5.33□□□□□ -1.56
CLK1-202ENST00000409403 CSTF2P33240 577 aaKnown RBP eCLIP5.33□□□□□ -1.56
CLK1-202ENST00000409403 EIF2DP41214 584 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms