RNA–Protein interactions for RNA: ENST00000408378.1

MIR548I3-201, Transcript of microRNA 548i-3, humanhuman

BASIC

Gene MIR548I3, Length 149 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548I3-201ENST00000408378 LMAN1P49257 510 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 TPD52P55327 224 aaPredicted RBP0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 CDK3Q00526 305 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 CXCL9Q07325 125 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 ZNF415Q09FC8 603 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 ZNF177Q13360 481 aaPredicted RBP0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 CDH18Q13634 790 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 KRT33BQ14525 404 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 TAB1Q15750 504 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 SLC35D3Q5M8T2 416 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 GARNL3Q5VVW2 1013 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 OLFML2AQ68BL7 652 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 CHMP1BQ7LBR1 199 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 HAUS6Q7Z4H7 955 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 PXKQ7Z7A4 578 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 CPLX4Q7Z7G2 160 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 COMMD2Q86X83 199 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 RNF130Q86XS8 419 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 MMD2Q8IY49 270 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 PDILTQ8N807 584 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 RTL3Q8N8U3 475 aaKnown RBP0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 SLC37A3Q8NCC5 494 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 OR5T2Q8NGG2 359 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 OR5M8Q8NGP6 311 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 MRAPQ8TCY5 172 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 CALML4Q96GE6 196 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 PGAM5Q96HS1 289 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 C4orf45Q96LM5 186 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 FAM218AQ96MZ4 157 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 LPAR4Q99677 370 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 CHCHD5Q9BSY4 110 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 NYXQ9GZU5 481 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 MIS12Q9H081 205 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 PPIL3Q9H2H8 161 aaKnown RBP0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 MTHFD2LQ9H903 347 aaPredicted RBP0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 JMJD4Q9H9V9 463 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 PREBQ9HCU5 417 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 SERINC1Q9NRX5 453 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 B3GAT1Q9P2W7 334 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 TRIM17Q9Y577 477 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 NME7Q9Y5B8 376 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 GAKO14976 1311 aa0.85□□□□□ -2.27
MIR548I3-201ENST00000408378 A0A1W2PQ72 361 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 FRMD3A2A2Y4 597 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 ANKUB1A6NFN9 424 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 FPGTO14772 594 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 OGTO15294 1046 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 PRAMEF11O60813 436 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 MITFO75030 526 aaPredicted RBP0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 LRP3O75074 770 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 ERAL1O75616 437 aaKnown RBP0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 KRT33AO76009 404 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 NXPH4O95158 308 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 DDX58O95786 925 aaKnown RBP0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 RB1P06400 928 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 OR2T7P0C7T2 308 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 HAPLN1P10915 354 aaPredicted RBP0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 ATP1A3P13637 1013 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 PTPN3P26045 913 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 CSTF2P33240 577 aaKnown RBP eCLIP0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 KHKP50053 298 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 DNA2P51530 1060 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 CDH8P55286 799 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 SIRPAP78324 504 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 PRAMEP78395 509 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 RUNX3Q13761 415 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 FAM189A2Q15884 450 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 CA9Q16790 459 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 SPECC1Q5M775 1068 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 KLHL35Q6PF15 583 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 FIGLAQ6QHK4 219 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 TMTC3Q6ZXV5 915 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 NUDT13Q86X67 352 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 CPXCR1Q8N123 301 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 OR10G7Q8NGN6 311 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 C9orf43Q8TAL5 461 aaPredicted RBP0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 RFFLQ8WZ73 363 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 ESAMQ96AP7 390 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 DHX58Q96C10 678 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 CCDC34Q96HJ3 373 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 C2orf48Q96LS8 159 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 FAM20AQ96MK3 541 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 NEK1Q96PY6 1258 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 FAM49AQ9H0Q0 323 aaPredicted RBP0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 HRH4Q9H3N8 390 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 JPT2Q9H910 190 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 TBC1D17Q9HA65 648 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 CYTL1Q9NRR1 136 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 DIAPH3Q9NSV4 1193 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 WSB2Q9NYS7 404 aaPredicted RBP0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 ZNF581Q9P0T4 197 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 LARSQ9P2J5 1176 aaKnown RBP0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 LNPEPQ9UIQ6 1025 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 HACL1Q9UJ83 578 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 CORO1CQ9ULV4 474 aaPredicted RBP0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 ZNF148Q9UQR1 794 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 TMEM98Q9Y2Y6 226 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 PIAS3Q9Y6X2 628 aa0.84□□□□□ -2.27
MIR548I3-201ENST00000408378 IGHV3-20A0A0C4DH32 117 aa0.83□□□□□ -2.28
MIR548I3-201ENST00000408378 IGHV3-38A0A0C4DH36 116 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms