RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 ZNF536O15090 1300 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 FXYD6-FXYD2A0A087WZ82 144 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 NEMP2A6NFY4 417 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 GPR25O00155 361 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 XPNPEP2O43895 674 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 ECI2O75521 394 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 MAGEA8P43361 318 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 ANKRD26P1Q6NSI1 321 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 PAQR3Q6TCH7 311 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 FXYD6Q9H0Q3 95 aa12.67□□□□□ -0.38
RNF43-201ENST00000407977 RANBP3Q9H6Z4 567 aaPredicted RBP12.67□□□□□ -0.38
RNF43-201ENST00000407977 M0R233 179 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 PIGRP01833 764 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 CHRM5P08912 532 aaPredicted RBP12.66□□□□□ -0.38
RNF43-201ENST00000407977 CBSLP0DN79 551 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 CBSP35520 551 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 GRIA2P42262 883 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 LILRA4P59901 499 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 EMX2Q04743 252 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 KIAA1161Q6NSJ0 714 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 NUDT13Q86X67 352 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 STOML3Q8TAV4 291 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 NXPE2Q96DL1 559 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 PCED1BQ96HM7 432 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 IL4I1Q96RQ9 567 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 SLC35A5Q9BS91 424 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 CNOT11Q9UKZ1 510 aaKnown RBP12.66□□□□□ -0.38
RNF43-201ENST00000407977 EXOSC1Q9Y3B2 195 aaKnown RBP12.66□□□□□ -0.38
RNF43-201ENST00000407977 A0A075B6Q4 140 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 UBXN7O94888 489 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 NPR2P20594 1047 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 FSHRP23945 695 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 ATP6AP1Q15904 470 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 ZNF367Q7RTV3 350 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 NUP54Q7Z3B4 507 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 ATAD1Q8NBU5 361 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 FAM46DQ8NEK8 389 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 C2orf15Q8WU43 125 aaKnown RBP12.66□□□□□ -0.38
RNF43-201ENST00000407977 NDRG1Q92597 394 aaKnown RBP12.66□□□□□ -0.38
RNF43-201ENST00000407977 EMID1Q96A84 441 aaPredicted RBP12.66□□□□□ -0.38
RNF43-201ENST00000407977 GLIS2Q9BZE0 524 aaPredicted RBP12.66□□□□□ -0.38
RNF43-201ENST00000407977 PCDHA2Q9Y5H9 948 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 DSG2Q14126 1118 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 CTC1Q2NKJ3 1217 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 FRG2Q64ET8 278 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 CCSAPQ6IQ19 270 aaPredicted RBP12.66□□□□□ -0.38
RNF43-201ENST00000407977 CES5AQ6NT32 575 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 OR7D4Q8NG98 312 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 FRG2BQ96QU4 278 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 BRD7Q9NPI1 651 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 ZCCHC3Q9NUD5 404 aaKnown RBP12.66□□□□□ -0.38
RNF43-201ENST00000407977 CYTH4Q9UIA0 394 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 A0A1B0GVC2 190 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 OR2AG2A6NM03 316 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 INMT-MINDY4F8WBC2 141 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 TYROBPO43914 113 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 VIPP01282 170 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 MAPK3P27361 379 aaPredicted RBP12.66□□□□□ -0.38
RNF43-201ENST00000407977 AP2S1P53680 142 aaPredicted RBP12.66□□□□□ -0.38
RNF43-201ENST00000407977 LSAMPQ13449 338 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 GANABQ14697 944 aaKnown RBP12.66□□□□□ -0.38
RNF43-201ENST00000407977 ABCA11PQ4W5N1 156 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 TNFAIP8L2Q6P589 184 aaPredicted RBP12.66□□□□□ -0.38
RNF43-201ENST00000407977 USP50Q70EL3 339 aaPredicted RBP12.66□□□□□ -0.38
RNF43-201ENST00000407977 SYVN1Q86TM6 617 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 ERVW-1Q9UQF0 538 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 MAGED1Q9Y5V3 778 aaPredicted RBP12.66□□□□□ -0.38
RNF43-201ENST00000407977 PLIN4Q96Q06 1357 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 TCRBV7S3A2A0A539 114 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 TRBC2A0A5B9 178 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 NEDD8-MDP1E9PL57 170 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 GRK5P34947 590 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 DNASE1L3Q13609 305 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 RHEBQ15382 184 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 MEP1AQ16819 746 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 VMACQ2NL98 169 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 NCBP2-AS2Q69YL0 99 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 GALNT13Q8IUC8 556 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 UPF1Q92900 1129 aaKnown RBP eCLIP12.66□□□□□ -0.385e-8■■■□□ 17.1
RNF43-201ENST00000407977 FUBP3Q96I24 572 aaKnown RBP eCLIP12.66□□□□□ -0.38
RNF43-201ENST00000407977 CYP2S1Q96SQ9 504 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 MTFR1LQ9H019 292 aa12.66□□□□□ -0.38
RNF43-201ENST00000407977 ZFP37Q9Y6Q3 630 aaPredicted RBP12.66□□□□□ -0.38
RNF43-201ENST00000407977 ZNF487B1APH4 448 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 PGAM2P15259 253 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 PVALBP20472 110 aaPredicted RBP12.65□□□□□ -0.38
RNF43-201ENST00000407977 CDK6Q00534 326 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 GARNL3Q5VVW2 1013 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 HEPHQ9BQS7 1158 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 GOLGA2P5Q9HBQ8 144 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 RABL2AQ9UBK7 228 aaPredicted RBP12.65□□□□□ -0.38
RNF43-201ENST00000407977 RABL2BQ9UNT1 228 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 HCN4Q9Y3Q4 1203 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 DENRO43583 198 aaKnown RBP12.65□□□□□ -0.38
RNF43-201ENST00000407977 ZNF182P17025 639 aaPredicted RBP12.65□□□□□ -0.38
RNF43-201ENST00000407977 CSNK2A2P19784 350 aaPredicted RBP12.65□□□□□ -0.38
RNF43-201ENST00000407977 GPR142Q7Z601 462 aa12.65□□□□□ -0.38
RNF43-201ENST00000407977 LSM14AQ8ND56 463 aaKnown RBP12.65□□□□□ -0.38
RNF43-201ENST00000407977 MRM3Q9HC36 420 aaKnown RBP12.65□□□□□ -0.38
RNF43-201ENST00000407977 CHMP1AQ9HD42 196 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms