RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 NEK10Q6ZWH5 1172 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 RNF44Q7L0R7 432 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 OVCH1Q7RTY7 1134 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 TTC29Q8NA56 475 aaPredicted RBP18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 PPFIBP2Q8ND30 876 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 SMPDL3AQ92484 453 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 IP6K3Q96PC2 410 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 GPR21Q99679 349 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 MFRPQ9BY79 579 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 SYNPO2LQ9H987 977 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 FAM114A2Q9NRY5 505 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 IARS2Q9NSE4 1012 aaKnown RBP18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 CTSFQ9UBX1 484 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 ZC3H7BQ9UGR2 993 aaKnown RBP18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 ASIC3Q9UHC3 531 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 DHRS7Q9Y394 339 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 MAU2Q9Y6X3 613 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 IGKV1-8A0A0C4DH67 115 aa18.44■□□□□ 0.54
SMARCB1-204ENST00000407422 PEX12O00623 359 aa18.44■□□□□ 0.54
SMARCB1-204ENST00000407422 SLC16A8O95907 504 aa18.44■□□□□ 0.54
SMARCB1-204ENST00000407422 EIF2S1P05198 315 aaKnown RBP18.44■□□□□ 0.54
SMARCB1-204ENST00000407422 CMPK1P30085 196 aa18.44■□□□□ 0.54
SMARCB1-204ENST00000407422 RPA3P35244 121 aaPredicted RBP18.44■□□□□ 0.54
SMARCB1-204ENST00000407422 PNLIPRP1P54315 467 aa18.44■□□□□ 0.54
SMARCB1-204ENST00000407422 NKG7Q16617 165 aa18.44■□□□□ 0.54
SMARCB1-204ENST00000407422 MSS51Q4VC12 460 aa18.44■□□□□ 0.54
SMARCB1-204ENST00000407422 YOD1Q5VVQ6 348 aaPredicted RBP18.44■□□□□ 0.54
SMARCB1-204ENST00000407422 CYHR1Q6ZMK1 362 aa18.44■□□□□ 0.54
SMARCB1-204ENST00000407422 SHISA6Q6ZSJ9 500 aa18.44■□□□□ 0.54
SMARCB1-204ENST00000407422 KCNMB4Q86W47 210 aa18.44■□□□□ 0.54
SMARCB1-204ENST00000407422 CD200R1Q8TD46 325 aa18.44■□□□□ 0.54
SMARCB1-204ENST00000407422 CALML6Q8TD86 181 aa18.44■□□□□ 0.54
SMARCB1-204ENST00000407422 ZNF480Q8WV37 535 aa18.44■□□□□ 0.54
SMARCB1-204ENST00000407422 ASB11Q8WXH4 323 aa18.44■□□□□ 0.54
SMARCB1-204ENST00000407422 FKBP10Q96AY3 582 aa18.44■□□□□ 0.54
SMARCB1-204ENST00000407422 SMAD5Q99717 465 aaKnown RBP18.44■□□□□ 0.54
SMARCB1-204ENST00000407422 LUZP4Q9P127 313 aa18.44■□□□□ 0.54
SMARCB1-204ENST00000407422 KLHL42Q9P2K6 505 aa18.44■□□□□ 0.54
SMARCB1-204ENST00000407422 G3BP2Q9UN86 482 aaKnown RBP18.44■□□□□ 0.54
SMARCB1-204ENST00000407422 PCDHGB7Q9Y5F8 929 aa18.44■□□□□ 0.54
SMARCB1-204ENST00000407422 HYKKA2RU49 373 aa18.43■□□□□ 0.54
SMARCB1-204ENST00000407422 DNALI1O14645 258 aaPredicted RBP18.43■□□□□ 0.54
SMARCB1-204ENST00000407422 ERVK-10P10266 1014 aa18.43■□□□□ 0.54
SMARCB1-204ENST00000407422 PGAM1P18669 254 aa18.43■□□□□ 0.54
SMARCB1-204ENST00000407422 CD97P48960 835 aa18.43■□□□□ 0.54
SMARCB1-204ENST00000407422 DHX9Q08211 1270 aaKnown RBP18.43■□□□□ 0.54
SMARCB1-204ENST00000407422 PTK6Q13882 451 aa18.43■□□□□ 0.54
SMARCB1-204ENST00000407422 CRYMQ14894 314 aa18.43■□□□□ 0.54
SMARCB1-204ENST00000407422 ARHGAP19Q14CB8 494 aa18.43■□□□□ 0.54
SMARCB1-204ENST00000407422 FAM214AQ32MH5 1076 aa18.43■□□□□ 0.54
SMARCB1-204ENST00000407422 PIWIL4Q7Z3Z4 852 aaKnown RBP18.43■□□□□ 0.54
SMARCB1-204ENST00000407422 LMNTD2Q8IXW0 634 aa18.43■□□□□ 0.54
SMARCB1-204ENST00000407422 CPNE9Q8IYJ1 553 aa18.43■□□□□ 0.54
SMARCB1-204ENST00000407422 RBMXL3Q8N7X1 1067 aaKnown RBP18.43■□□□□ 0.54
SMARCB1-204ENST00000407422 INPP5DQ92835 1189 aa18.43■□□□□ 0.54
SMARCB1-204ENST00000407422 FER1L6-AS2Q96M78 137 aa18.43■□□□□ 0.54
SMARCB1-204ENST00000407422 SPSB2Q99619 263 aa18.43■□□□□ 0.54
SMARCB1-204ENST00000407422 ZFYVE21Q9BQ24 234 aa18.43■□□□□ 0.54
SMARCB1-204ENST00000407422 MRPS30Q9NP92 439 aaKnown RBP18.43■□□□□ 0.54
SMARCB1-204ENST00000407422 TAC3Q9UHF0 121 aa18.43■□□□□ 0.54
SMARCB1-204ENST00000407422 CNTRLQ7Z7A1 2325 aa18.43■□□□□ 0.54
SMARCB1-204ENST00000407422 E7ENX8 843 aa18.42■□□□□ 0.54
SMARCB1-204ENST00000407422 SORBS2O94875 1100 aaKnown RBP18.42■□□□□ 0.54
SMARCB1-204ENST00000407422 SYF2O95926 243 aaKnown RBP18.42■□□□□ 0.54
SMARCB1-204ENST00000407422 ALBP02768 609 aa18.42■□□□□ 0.54
SMARCB1-204ENST00000407422 PIM1P11309 404 aaPredicted RBP18.42■□□□□ 0.54
SMARCB1-204ENST00000407422 TIAL1Q01085 375 aaKnown RBP eCLIP18.42■□□□□ 0.54
SMARCB1-204ENST00000407422 TAP2Q03519 686 aa18.42■□□□□ 0.54
SMARCB1-204ENST00000407422 JMJD6Q6NYC1 403 aaPredicted RBP18.42■□□□□ 0.54
SMARCB1-204ENST00000407422 IGDCC3Q8IVU1 814 aa18.42■□□□□ 0.54
SMARCB1-204ENST00000407422 CLEC1AQ8NC01 280 aa18.42■□□□□ 0.54
SMARCB1-204ENST00000407422 SLCO2A1Q92959 643 aa18.42■□□□□ 0.54
SMARCB1-204ENST00000407422 NDNQ99608 321 aa18.42■□□□□ 0.54
SMARCB1-204ENST00000407422 PLCD4Q9BRC7 762 aa18.42■□□□□ 0.54
SMARCB1-204ENST00000407422 FAM167BQ9BTA0 163 aa18.42■□□□□ 0.54
SMARCB1-204ENST00000407422 AARSD1Q9BTE6 412 aaKnown RBP18.42■□□□□ 0.54
SMARCB1-204ENST00000407422 SLC26A1Q9H2B4 701 aa18.42■□□□□ 0.54
SMARCB1-204ENST00000407422 SOX17Q9H6I2 414 aaPredicted RBP18.42■□□□□ 0.54
SMARCB1-204ENST00000407422 WDR54Q9H977 334 aa18.42■□□□□ 0.54
SMARCB1-204ENST00000407422 ABCF3Q9NUQ8 709 aa18.42■□□□□ 0.54
SMARCB1-204ENST00000407422 PCYOX1Q9UHG3 505 aa18.42■□□□□ 0.54
SMARCB1-204ENST00000407422 H0YGG7 62 aa18.41■□□□□ 0.54
SMARCB1-204ENST00000407422 GFYI3L273 518 aa18.41■□□□□ 0.54
SMARCB1-204ENST00000407422 DPM1O60762 260 aa18.41■□□□□ 0.54
SMARCB1-204ENST00000407422 MPC1LP0DKB6 136 aa18.41■□□□□ 0.54
SMARCB1-204ENST00000407422 TCP1P17987 556 aaKnown RBP18.41■□□□□ 0.54
SMARCB1-204ENST00000407422 MMP11P24347 488 aa18.41■□□□□ 0.54
SMARCB1-204ENST00000407422 IVDP26440 423 aa18.41■□□□□ 0.54
SMARCB1-204ENST00000407422 GABRB3P28472 473 aa18.41■□□□□ 0.54
SMARCB1-204ENST00000407422 ARF3P61204 181 aaPredicted RBP18.41■□□□□ 0.54
SMARCB1-204ENST00000407422 PRDX1Q06830 199 aaKnown RBP18.41■□□□□ 0.54
SMARCB1-204ENST00000407422 ICE2Q659A1 982 aa18.41■□□□□ 0.54
SMARCB1-204ENST00000407422 PAQR7Q86WK9 346 aa18.41■□□□□ 0.54
SMARCB1-204ENST00000407422 GALNT16Q8N428 558 aa18.41■□□□□ 0.54
SMARCB1-204ENST00000407422 Q8NA96 180 aa18.41■□□□□ 0.54
SMARCB1-204ENST00000407422 FBXO15Q8NCQ5 510 aaPredicted RBP18.41■□□□□ 0.54
SMARCB1-204ENST00000407422 C2CD4AQ8NCU7 369 aaPredicted RBP18.41■□□□□ 0.54
SMARCB1-204ENST00000407422 CPT1CQ8TCG5 803 aa18.41■□□□□ 0.54
SMARCB1-204ENST00000407422 CAPZA3Q96KX2 299 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms