RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 SUSD1Q6UWL2 747 aa14.7□□□□□ -0.06
TPM1-207ENST00000403994 NEK10Q6ZWH5 1172 aa14.7□□□□□ -0.06
TPM1-207ENST00000403994 HPS6Q86YV9 775 aa14.7□□□□□ -0.06
TPM1-207ENST00000403994 PPIL6Q8IXY8 311 aa14.7□□□□□ -0.06
TPM1-207ENST00000403994 GALNT16Q8N428 558 aa14.7□□□□□ -0.06
TPM1-207ENST00000403994 METTL27Q8N6F8 245 aaPredicted RBP14.7□□□□□ -0.06
TPM1-207ENST00000403994 Q8NA96 180 aa14.7□□□□□ -0.06
TPM1-207ENST00000403994 SMPDL3AQ92484 453 aa14.7□□□□□ -0.06
TPM1-207ENST00000403994 PTERQ96BW5 349 aa14.7□□□□□ -0.06
TPM1-207ENST00000403994 SIGLEC10Q96LC7 697 aa14.7□□□□□ -0.06
TPM1-207ENST00000403994 FER1L6-AS2Q96M78 137 aa14.7□□□□□ -0.06
TPM1-207ENST00000403994 ACAT2Q9BWD1 397 aa14.7□□□□□ -0.06
TPM1-207ENST00000403994 SLC26A1Q9H2B4 701 aa14.7□□□□□ -0.06
TPM1-207ENST00000403994 KCNF1Q9H3M0 494 aa14.7□□□□□ -0.06
TPM1-207ENST00000403994 LUZP4Q9P127 313 aa14.7□□□□□ -0.06
TPM1-207ENST00000403994 SNX12Q9UMY4 172 aa14.7□□□□□ -0.06
TPM1-207ENST00000403994 MAD1L1Q9Y6D9 718 aa14.7□□□□□ -0.06
TPM1-207ENST00000403994 HIVEP3Q5T1R4 2406 aa14.7□□□□□ -0.06
TPM1-207ENST00000403994 LOC105369274A0A096LPK9 316 aa14.69□□□□□ -0.06
TPM1-207ENST00000403994 IGKV1-8A0A0C4DH67 115 aa14.69□□□□□ -0.06
TPM1-207ENST00000403994 LOC102723532A0A0G2JNH3 316 aa14.69□□□□□ -0.06
TPM1-207ENST00000403994 A0A0J9YVX5 310 aa14.69□□□□□ -0.06
TPM1-207ENST00000403994 AGPSO00116 658 aa14.69□□□□□ -0.06
TPM1-207ENST00000403994 SLC16A8O95907 504 aa14.69□□□□□ -0.06
TPM1-207ENST00000403994 IGHEP01854 428 aa14.69□□□□□ -0.06
TPM1-207ENST00000403994 ALBP02768 609 aa14.69□□□□□ -0.06
TPM1-207ENST00000403994 MMP11P24347 488 aa14.69□□□□□ -0.06
TPM1-207ENST00000403994 CMPK1P30085 196 aa14.69□□□□□ -0.06
TPM1-207ENST00000403994 RPA3P35244 121 aaPredicted RBP14.69□□□□□ -0.06
TPM1-207ENST00000403994 MPP1Q00013 466 aa14.69□□□□□ -0.06
TPM1-207ENST00000403994 SRSF1Q07955 248 aaKnown RBP eCLIP14.69□□□□□ -0.064e-10■■■□□ 14.7
TPM1-207ENST00000403994 UBAP2LQ14157 1087 aaKnown RBP14.69□□□□□ -0.06
TPM1-207ENST00000403994 CRYMQ14894 314 aa14.69□□□□□ -0.06
TPM1-207ENST00000403994 MYBPC3Q14896 1274 aa14.69□□□□□ -0.06
TPM1-207ENST00000403994 ARHGAP19Q14CB8 494 aa14.69□□□□□ -0.06
TPM1-207ENST00000403994 WASHC2DQ5SRD0 308 aa14.69□□□□□ -0.06
TPM1-207ENST00000403994 OVCH1Q7RTY7 1134 aa14.69□□□□□ -0.06
TPM1-207ENST00000403994 LMNTD2Q8IXW0 634 aa14.69□□□□□ -0.06
TPM1-207ENST00000403994 OR4N4Q8N0Y3 316 aa14.69□□□□□ -0.06
TPM1-207ENST00000403994 EFCAB3Q8N7B9 438 aa14.69□□□□□ -0.06
TPM1-207ENST00000403994 RBMXL3Q8N7X1 1067 aaKnown RBP14.69□□□□□ -0.06
TPM1-207ENST00000403994 CD200R1Q8TD46 325 aa14.69□□□□□ -0.06
TPM1-207ENST00000403994 C10orf90Q96M02 699 aa14.69□□□□□ -0.06
TPM1-207ENST00000403994 PKP4Q99569 1192 aa14.69□□□□□ -0.06
TPM1-207ENST00000403994 GPR21Q99679 349 aa14.69□□□□□ -0.06
TPM1-207ENST00000403994 ZFYVE21Q9BQ24 234 aa14.69□□□□□ -0.06
TPM1-207ENST00000403994 FAM167BQ9BTA0 163 aa14.69□□□□□ -0.06
TPM1-207ENST00000403994 DPH7Q9BTV6 452 aa14.69□□□□□ -0.06
TPM1-207ENST00000403994 MFRPQ9BY79 579 aa14.69□□□□□ -0.06
TPM1-207ENST00000403994 CCDC68Q9H2F9 335 aa14.69□□□□□ -0.06
TPM1-207ENST00000403994 SYNPO2LQ9H987 977 aa14.69□□□□□ -0.06
TPM1-207ENST00000403994 GRPEL1Q9HAV7 217 aa14.69□□□□□ -0.06
TPM1-207ENST00000403994 C20orf96Q9NUD7 363 aaPredicted RBP14.69□□□□□ -0.06
TPM1-207ENST00000403994 KLHL42Q9P2K6 505 aa14.69□□□□□ -0.06
TPM1-207ENST00000403994 ANKMY1Q9P2S6 941 aa14.69□□□□□ -0.06
TPM1-207ENST00000403994 CDC23Q9UJX2 597 aa14.69□□□□□ -0.06
TPM1-207ENST00000403994 FBXL4Q9UKA2 621 aa14.69□□□□□ -0.06
TPM1-207ENST00000403994 NXT1Q9UKK6 140 aaKnown RBP14.69□□□□□ -0.06
TPM1-207ENST00000403994 UNC79Q9P2D8 2635 aa14.68□□□□□ -0.06
TPM1-207ENST00000403994 CES2O00748 559 aa14.68□□□□□ -0.06
TPM1-207ENST00000403994 SOCS6O14544 535 aa14.68□□□□□ -0.06
TPM1-207ENST00000403994 SRPX2O60687 465 aaPredicted RBP14.68□□□□□ -0.06
TPM1-207ENST00000403994 ALOX12BO75342 701 aa14.68□□□□□ -0.06
TPM1-207ENST00000403994 ALPPP05187 535 aa14.68□□□□□ -0.06
TPM1-207ENST00000403994 ERVK-10P10266 1014 aa14.68□□□□□ -0.06
TPM1-207ENST00000403994 PIM1P11309 404 aaPredicted RBP14.68□□□□□ -0.06
TPM1-207ENST00000403994 ENO3P13929 434 aaPredicted RBP14.68□□□□□ -0.06
TPM1-207ENST00000403994 PGAM1P18669 254 aa14.68□□□□□ -0.06
TPM1-207ENST00000403994 OR1D4P47884 311 aa14.68□□□□□ -0.06
TPM1-207ENST00000403994 PNLIPRP1P54315 467 aa14.68□□□□□ -0.06
TPM1-207ENST00000403994 TSTA3Q13630 321 aaPredicted RBP14.68□□□□□ -0.06
TPM1-207ENST00000403994 PPP1R7Q15435 360 aa14.68□□□□□ -0.06
TPM1-207ENST00000403994 KCNMB4Q86W47 210 aa14.68□□□□□ -0.06
TPM1-207ENST00000403994 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.68□□□□□ -0.06
TPM1-207ENST00000403994 FBXO15Q8NCQ5 510 aaPredicted RBP14.68□□□□□ -0.06
TPM1-207ENST00000403994 CALML6Q8TD86 181 aa14.68□□□□□ -0.06
TPM1-207ENST00000403994 ZNF480Q8WV37 535 aa14.68□□□□□ -0.06
TPM1-207ENST00000403994 PNPLA2Q96AD5 504 aa14.68□□□□□ -0.06
TPM1-207ENST00000403994 PLCD4Q9BRC7 762 aa14.68□□□□□ -0.06
TPM1-207ENST00000403994 SOX17Q9H6I2 414 aaPredicted RBP14.68□□□□□ -0.06
TPM1-207ENST00000403994 MRPS30Q9NP92 439 aaKnown RBP14.68□□□□□ -0.06
TPM1-207ENST00000403994 C5AR2Q9P296 337 aa14.68□□□□□ -0.06
TPM1-207ENST00000403994 TAC3Q9UHF0 121 aa14.68□□□□□ -0.06
TPM1-207ENST00000403994 FBXO5Q9UKT4 447 aa14.68□□□□□ -0.06
TPM1-207ENST00000403994 HS3ST3B1Q9Y662 390 aa14.68□□□□□ -0.06
TPM1-207ENST00000403994 COMMD10Q9Y6G5 202 aa14.68□□□□□ -0.06
TPM1-207ENST00000403994 MAU2Q9Y6X3 613 aa14.68□□□□□ -0.06
TPM1-207ENST00000403994 NBPF19A0A087WUL8 3843 aa14.67□□□□□ -0.06
TPM1-207ENST00000403994 CENPEQ02224 2701 aa14.67□□□□□ -0.06
TPM1-207ENST00000403994 DOPEY1Q5JWR5 2465 aa14.67□□□□□ -0.06
TPM1-207ENST00000403994 HYKKA2RU49 373 aa14.67□□□□□ -0.06
TPM1-207ENST00000403994 CYSRT1A8MQ03 144 aa14.67□□□□□ -0.06
TPM1-207ENST00000403994 ZSCAN12O43309 604 aa14.67□□□□□ -0.06
TPM1-207ENST00000403994 VPS26AO75436 327 aa14.67□□□□□ -0.06
TPM1-207ENST00000403994 BANF1O75531 89 aa14.67□□□□□ -0.06
TPM1-207ENST00000403994 EIF2S1P05198 315 aaKnown RBP14.67□□□□□ -0.06
TPM1-207ENST00000403994 MPC1LP0DKB6 136 aa14.67□□□□□ -0.06
TPM1-207ENST00000403994 PTK6Q13882 451 aa14.67□□□□□ -0.06
TPM1-207ENST00000403994 PRTGQ2VWP7 1150 aa14.67□□□□□ -0.06
TPM1-207ENST00000403994 FAM214AQ32MH5 1076 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms