RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 MUC22E2RYF6 1773 aaPredicted RBP17.34■□□□□ 0.37
CHTOP-205ENST00000403433 PRRT4C9JH25 899 aa17.34■□□□□ 0.37
CHTOP-205ENST00000403433 H3BM21 787 aa17.34■□□□□ 0.37
CHTOP-205ENST00000403433 RFXANKO14593 260 aa17.34■□□□□ 0.37
CHTOP-205ENST00000403433 PRMT3O60678 531 aa17.34■□□□□ 0.37
CHTOP-205ENST00000403433 PCNAP12004 261 aa17.34■□□□□ 0.37
CHTOP-205ENST00000403433 HLA-EP13747 358 aa17.34■□□□□ 0.37
CHTOP-205ENST00000403433 MTHFRP42898 656 aa17.34■□□□□ 0.37
CHTOP-205ENST00000403433 NRIP1P48552 1158 aa17.34■□□□□ 0.37
CHTOP-205ENST00000403433 METAP1P53582 386 aa17.34■□□□□ 0.37
CHTOP-205ENST00000403433 CCSMST1Q4G0I0 132 aa17.34■□□□□ 0.37
CHTOP-205ENST00000403433 THEMIS2Q5TEJ8 643 aa17.34■□□□□ 0.37
CHTOP-205ENST00000403433 PDE12Q6L8Q7 609 aaKnown RBP17.34■□□□□ 0.37
CHTOP-205ENST00000403433 TMEM214Q6NUQ4 689 aaKnown RBP17.34■□□□□ 0.37
CHTOP-205ENST00000403433 ENPP6Q6UWR7 440 aa17.34■□□□□ 0.37
CHTOP-205ENST00000403433 ZNF786Q8N393 782 aa17.34■□□□□ 0.37
CHTOP-205ENST00000403433 VN1R2Q8NFZ6 395 aa17.34■□□□□ 0.37
CHTOP-205ENST00000403433 WDR20Q8TBZ3 569 aa17.34■□□□□ 0.37
CHTOP-205ENST00000403433 GFM2Q969S9 779 aaKnown RBP17.34■□□□□ 0.37
CHTOP-205ENST00000403433 AURKBQ96GD4 344 aaPredicted RBP17.34■□□□□ 0.37
CHTOP-205ENST00000403433 MTIF3Q9H2K0 278 aaKnown RBP17.34■□□□□ 0.37
CHTOP-205ENST00000403433 DEC1Q9P2X7 70 aa17.34■□□□□ 0.37
CHTOP-205ENST00000403433 CIDEBQ9UHD4 219 aa17.34■□□□□ 0.37
CHTOP-205ENST00000403433 KIAA1549LQ6ZVL6 1849 aa17.34■□□□□ 0.37
CHTOP-205ENST00000403433 ALPK3Q96L96 1907 aa17.34■□□□□ 0.37
CHTOP-205ENST00000403433 H0YIV9 168 aa17.33■□□□□ 0.37
CHTOP-205ENST00000403433 SPINT1O43278 529 aa17.33■□□□□ 0.37
CHTOP-205ENST00000403433 MYO1DO94832 1006 aa17.33■□□□□ 0.37
CHTOP-205ENST00000403433 PRSS23O95084 383 aa17.33■□□□□ 0.37
CHTOP-205ENST00000403433 SLC16A8O95907 504 aa17.33■□□□□ 0.37
CHTOP-205ENST00000403433 GSNP06396 782 aa17.33■□□□□ 0.37
CHTOP-205ENST00000403433 RETP07949 1114 aa17.33■□□□□ 0.37
CHTOP-205ENST00000403433 HSD3B1P14060 373 aa17.33■□□□□ 0.37
CHTOP-205ENST00000403433 HSD3B2P26439 372 aa17.33■□□□□ 0.37
CHTOP-205ENST00000403433 IMPA1P29218 277 aa17.33■□□□□ 0.37
CHTOP-205ENST00000403433 HNRNPFP52597 415 aaKnown RBP17.33■□□□□ 0.37
CHTOP-205ENST00000403433 TUBA4AP68366 448 aa17.33■□□□□ 0.37
CHTOP-205ENST00000403433 ROR2Q01974 943 aaKnown RBP17.33■□□□□ 0.37
CHTOP-205ENST00000403433 HNRNPA1L2Q32P51 320 aaKnown RBP17.33■□□□□ 0.37
CHTOP-205ENST00000403433 BCL7AQ4VC05 210 aa17.33■□□□□ 0.37
CHTOP-205ENST00000403433 OTUD3Q5T2D3 398 aaPredicted RBP17.33■□□□□ 0.37
CHTOP-205ENST00000403433 GPR149Q86SP6 731 aa17.33■□□□□ 0.37
CHTOP-205ENST00000403433 CALHM3Q86XJ0 350 aa17.33■□□□□ 0.37
CHTOP-205ENST00000403433 FAM86B1Q8N7N1 296 aa17.33■□□□□ 0.37
CHTOP-205ENST00000403433 C12orf76Q8N812 135 aaPredicted RBP17.33■□□□□ 0.37
CHTOP-205ENST00000403433 TMIEQ8NEW7 156 aa17.33■□□□□ 0.37
CHTOP-205ENST00000403433 OR56A3Q8NH54 315 aa17.33■□□□□ 0.37
CHTOP-205ENST00000403433 TMBIM1Q969X1 311 aa17.33■□□□□ 0.37
CHTOP-205ENST00000403433 ARRDC3Q96B67 414 aa17.33■□□□□ 0.37
CHTOP-205ENST00000403433 SDCCAG3Q96C92 435 aa17.33■□□□□ 0.37
CHTOP-205ENST00000403433 FBXL20Q96IG2 436 aa17.33■□□□□ 0.37
CHTOP-205ENST00000403433 ZFYVE19Q96K21 471 aa17.33■□□□□ 0.37
CHTOP-205ENST00000403433 EGLN2Q96KS0 407 aa17.33■□□□□ 0.37
CHTOP-205ENST00000403433 MTERF1Q99551 399 aaKnown RBP17.33■□□□□ 0.37
CHTOP-205ENST00000403433 CARS2Q9HA77 564 aaKnown RBP17.33■□□□□ 0.37
CHTOP-205ENST00000403433 NTN4Q9HB63 628 aa17.33■□□□□ 0.37
CHTOP-205ENST00000403433 SGK2Q9HBY8 427 aa17.33■□□□□ 0.37
CHTOP-205ENST00000403433 VCX3AQ9NNX9 186 aa17.33■□□□□ 0.37
CHTOP-205ENST00000403433 SPATA6Q9NWH7 488 aaPredicted RBP17.33■□□□□ 0.37
CHTOP-205ENST00000403433 GPRC5BQ9NZH0 403 aa17.33■□□□□ 0.37
CHTOP-205ENST00000403433 RUVBL1Q9Y265 456 aaKnown RBP17.33■□□□□ 0.37
CHTOP-205ENST00000403433 TCF20Q9UGU0 1960 aaKnown RBP17.33■□□□□ 0.36
CHTOP-205ENST00000403433 VILLO15195 856 aa17.33■□□□□ 0.36
CHTOP-205ENST00000403433 MYOGP15173 224 aa17.33■□□□□ 0.36
CHTOP-205ENST00000403433 HOXB9P17482 250 aaPredicted RBP17.33■□□□□ 0.36
CHTOP-205ENST00000403433 PDHA2P29803 388 aa17.33■□□□□ 0.36
CHTOP-205ENST00000403433 CDKN2CP42773 168 aa17.33■□□□□ 0.36
CHTOP-205ENST00000403433 SLC6A11P48066 632 aa17.33■□□□□ 0.36
CHTOP-205ENST00000403433 ACSM2AQ08AH3 577 aa17.33■□□□□ 0.36
CHTOP-205ENST00000403433 MESP2Q0VG99 397 aa17.33■□□□□ 0.36
CHTOP-205ENST00000403433 ELAVL3Q14576 367 aaKnown RBP17.33■□□□□ 0.36
CHTOP-205ENST00000403433 C9orf64Q5T6V5 341 aa17.33■□□□□ 0.36
CHTOP-205ENST00000403433 ACSM2BQ68CK6 577 aa17.33■□□□□ 0.36
CHTOP-205ENST00000403433 RAET1GQ6H3X3 334 aa17.33■□□□□ 0.36
CHTOP-205ENST00000403433 OR4F3Q6IEY1 312 aa17.33■□□□□ 0.36
CHTOP-205ENST00000403433 TMC5Q6UXY8 1006 aa17.33■□□□□ 0.36
CHTOP-205ENST00000403433 ZNF765Q7L2R6 523 aa17.33■□□□□ 0.36
CHTOP-205ENST00000403433 TRIM74Q86UV6 250 aa17.33■□□□□ 0.36
CHTOP-205ENST00000403433 NLRP8Q86W28 1048 aa17.33■□□□□ 0.36
CHTOP-205ENST00000403433 TRAPPC5Q8IUR0 188 aa17.33■□□□□ 0.36
CHTOP-205ENST00000403433 POP5Q969H6 163 aaKnown RBP17.33■□□□□ 0.36
CHTOP-205ENST00000403433 NMD3Q96D46 503 aaKnown RBP17.33■□□□□ 0.36
CHTOP-205ENST00000403433 PPP1R16AQ96I34 528 aa17.33■□□□□ 0.36
CHTOP-205ENST00000403433 REXO5Q96IC2 774 aaKnown RBP17.33■□□□□ 0.36
CHTOP-205ENST00000403433 HHIPQ96QV1 700 aa17.33■□□□□ 0.36
CHTOP-205ENST00000403433 OR4K3Q96R72 315 aa17.33■□□□□ 0.36
CHTOP-205ENST00000403433 RBM38Q9H0Z9 239 aaKnown RBP17.33■□□□□ 0.36
CHTOP-205ENST00000403433 BRF2Q9HAW0 419 aa17.33■□□□□ 0.36
CHTOP-205ENST00000403433 UPK1AO00322 258 aa17.32■□□□□ 0.36
CHTOP-205ENST00000403433 CREG1O75629 220 aa17.32■□□□□ 0.36
CHTOP-205ENST00000403433 RECQL5O94762 991 aaPredicted RBP17.32■□□□□ 0.36
CHTOP-205ENST00000403433 SNAP29O95721 258 aa17.32■□□□□ 0.36
CHTOP-205ENST00000403433 SOD1P00441 154 aa17.32■□□□□ 0.36
CHTOP-205ENST00000403433 ALBP02768 609 aa17.32■□□□□ 0.36
CHTOP-205ENST00000403433 COX7A2P14406 83 aa17.32■□□□□ 0.36
CHTOP-205ENST00000403433 GPR1P46091 355 aa17.32■□□□□ 0.36
CHTOP-205ENST00000403433 ALDH3A2P51648 485 aa17.32■□□□□ 0.36
CHTOP-205ENST00000403433 SRSF11Q05519 484 aaKnown RBP17.32■□□□□ 0.36
CHTOP-205ENST00000403433 ABHD18Q0P651 414 aa17.32■□□□□ 0.36
CHTOP-205ENST00000403433 MTAPQ13126 283 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms