RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 ICE2Q659A1 982 aa18.44■□□□□ 0.54
RTN4-207ENST00000402434 MBOAT1Q6ZNC8 495 aa18.44■□□□□ 0.54
RTN4-207ENST00000402434 MCATQ8IVS2 390 aaKnown RBP18.44■□□□□ 0.54
RTN4-207ENST00000402434 KIAA1143Q96AT1 154 aaPredicted RBP18.44■□□□□ 0.54
RTN4-207ENST00000402434 SLC45A3Q96JT2 553 aa18.44■□□□□ 0.54
RTN4-207ENST00000402434 ZNF285Q96NJ3 590 aa18.44■□□□□ 0.54
RTN4-207ENST00000402434 RHOXF2Q9BQY4 288 aa18.44■□□□□ 0.54
RTN4-207ENST00000402434 DPH7Q9BTV6 452 aa18.44■□□□□ 0.54
RTN4-207ENST00000402434 TRIM54Q9BYV2 358 aa18.44■□□□□ 0.54
RTN4-207ENST00000402434 SPRTNQ9H040 489 aaPredicted RBP18.44■□□□□ 0.54
RTN4-207ENST00000402434 AKIRIN1Q9H9L7 192 aaPredicted RBP18.44■□□□□ 0.54
RTN4-207ENST00000402434 GPN2Q9H9Y4 310 aaPredicted RBP18.44■□□□□ 0.54
RTN4-207ENST00000402434 SLC6A20Q9NP91 592 aa18.44■□□□□ 0.54
RTN4-207ENST00000402434 MRPS30Q9NP92 439 aaKnown RBP18.44■□□□□ 0.54
RTN4-207ENST00000402434 ANKMY1Q9P2S6 941 aa18.44■□□□□ 0.54
RTN4-207ENST00000402434 TAC3Q9UHF0 121 aa18.44■□□□□ 0.54
RTN4-207ENST00000402434 NFU1Q9UMS0 254 aa18.44■□□□□ 0.54
RTN4-207ENST00000402434 AP1M2Q9Y6Q5 423 aa18.44■□□□□ 0.54
RTN4-207ENST00000402434 IGKV1-8A0A0C4DH67 115 aa18.43■□□□□ 0.54
RTN4-207ENST00000402434 MEN1O00255 615 aa18.43■□□□□ 0.54
RTN4-207ENST00000402434 ZNF749O43361 778 aa18.43■□□□□ 0.54
RTN4-207ENST00000402434 CTSBP07858 339 aa18.43■□□□□ 0.54
RTN4-207ENST00000402434 STMN1P16949 149 aa18.43■□□□□ 0.54
RTN4-207ENST00000402434 ABATP80404 500 aa18.43■□□□□ 0.54
RTN4-207ENST00000402434 GPS2Q13227 327 aa18.43■□□□□ 0.54
RTN4-207ENST00000402434 TSTA3Q13630 321 aaPredicted RBP18.43■□□□□ 0.54
RTN4-207ENST00000402434 ZXDCQ2QGD7 858 aaPredicted RBP18.43■□□□□ 0.54
RTN4-207ENST00000402434 TLDC1Q6P9B6 456 aa18.43■□□□□ 0.54
RTN4-207ENST00000402434 AGTRAPQ6RW13 159 aa18.43■□□□□ 0.54
RTN4-207ENST00000402434 UBXN10Q96LJ8 280 aa18.43■□□□□ 0.54
RTN4-207ENST00000402434 PLCD4Q9BRC7 762 aa18.43■□□□□ 0.54
RTN4-207ENST00000402434 DERL2Q9GZP9 239 aa18.43■□□□□ 0.54
RTN4-207ENST00000402434 ACTR5Q9H9F9 607 aaPredicted RBP18.43■□□□□ 0.54
RTN4-207ENST00000402434 ARL15Q9NXU5 204 aa18.43■□□□□ 0.54
RTN4-207ENST00000402434 CACNA1GO43497 2377 aa18.43■□□□□ 0.54
RTN4-207ENST00000402434 CDC7O00311 574 aa18.42■□□□□ 0.54
RTN4-207ENST00000402434 CCNDBP1O95273 360 aa18.42■□□□□ 0.54
RTN4-207ENST00000402434 KLK3P07288 261 aaPredicted RBP18.42■□□□□ 0.54
RTN4-207ENST00000402434 HBQ1P09105 142 aa18.42■□□□□ 0.54
RTN4-207ENST00000402434 F8A1P23610 371 aa18.42■□□□□ 0.54
RTN4-207ENST00000402434 RAB10P61026 200 aa18.42■□□□□ 0.54
RTN4-207ENST00000402434 RELAQ04206 551 aa18.42■□□□□ 0.54
RTN4-207ENST00000402434 SLMAPQ14BN4 828 aa18.42■□□□□ 0.54
RTN4-207ENST00000402434 ZNF425Q6IV72 752 aa18.42■□□□□ 0.54
RTN4-207ENST00000402434 DSELQ8IZU8 1212 aa18.42■□□□□ 0.54
RTN4-207ENST00000402434 ZSCAN1Q8NBB4 408 aa18.42■□□□□ 0.54
RTN4-207ENST00000402434 SGPP1Q9BX95 441 aa18.42■□□□□ 0.54
RTN4-207ENST00000402434 PCBD2Q9H0N5 130 aa18.42■□□□□ 0.54
RTN4-207ENST00000402434 CCDC177Q9NQR7 707 aaPredicted RBP18.42■□□□□ 0.54
RTN4-207ENST00000402434 PCMTD2Q9NV79 361 aa18.42■□□□□ 0.54
RTN4-207ENST00000402434 IL17BQ9UHF5 180 aa18.42■□□□□ 0.54
RTN4-207ENST00000402434 CROTQ9UKG9 612 aa18.42■□□□□ 0.54
RTN4-207ENST00000402434 ZSCAN9O15535 394 aaPredicted RBP18.41■□□□□ 0.54
RTN4-207ENST00000402434 PHGDHO43175 533 aaKnown RBP18.41■□□□□ 0.54
RTN4-207ENST00000402434 NRP2O60462 931 aa18.41■□□□□ 0.54
RTN4-207ENST00000402434 SRPX2O60687 465 aaPredicted RBP18.41■□□□□ 0.54
RTN4-207ENST00000402434 ACSL3O95573 720 aa18.41■□□□□ 0.54
RTN4-207ENST00000402434 CCND1P24385 295 aa18.41■□□□□ 0.54
RTN4-207ENST00000402434 DLSTP36957 453 aa18.41■□□□□ 0.54
RTN4-207ENST00000402434 GCGRP47871 477 aa18.41■□□□□ 0.54
RTN4-207ENST00000402434 TBPL1P62380 186 aa18.41■□□□□ 0.54
RTN4-207ENST00000402434 NAE1Q13564 534 aa18.41■□□□□ 0.54
RTN4-207ENST00000402434 RHBDD2Q6NTF9 364 aa18.41■□□□□ 0.54
RTN4-207ENST00000402434 FBXO42Q6P3S6 717 aa18.41■□□□□ 0.54
RTN4-207ENST00000402434 RNF44Q7L0R7 432 aa18.41■□□□□ 0.54
RTN4-207ENST00000402434 EIF1ADQ8N9N8 165 aaKnown RBP18.41■□□□□ 0.54
RTN4-207ENST00000402434 CT55Q8WUE5 264 aa18.41■□□□□ 0.54
RTN4-207ENST00000402434 ATL1Q8WXF7 558 aa18.41■□□□□ 0.54
RTN4-207ENST00000402434 FBXL8Q96CD0 374 aa18.41■□□□□ 0.54
RTN4-207ENST00000402434 CLIP3Q96DZ5 547 aa18.41■□□□□ 0.54
RTN4-207ENST00000402434 FAM117AQ9C073 453 aa18.41■□□□□ 0.54
RTN4-207ENST00000402434 ATG10Q9H0Y0 220 aa18.41■□□□□ 0.54
RTN4-207ENST00000402434 SNX7Q9UNH6 387 aa18.41■□□□□ 0.54
RTN4-207ENST00000402434 PCDHGA6Q9Y5G7 932 aa18.41■□□□□ 0.54
RTN4-207ENST00000402434 HMX2A2RU54 273 aa18.4■□□□□ 0.54
RTN4-207ENST00000402434 NPEPPSL1A6NEC2 478 aa18.4■□□□□ 0.54
RTN4-207ENST00000402434 C21orf140B9A014 251 aa18.4■□□□□ 0.54
RTN4-207ENST00000402434 CCDC166P0CW27 439 aa18.4■□□□□ 0.54
RTN4-207ENST00000402434 TCN2P20062 427 aa18.4■□□□□ 0.54
RTN4-207ENST00000402434 HRH2P25021 359 aa18.4■□□□□ 0.54
RTN4-207ENST00000402434 CDKL1Q00532 357 aa18.4■□□□□ 0.54
RTN4-207ENST00000402434 TCTE1Q5JU00 501 aa18.4■□□□□ 0.54
RTN4-207ENST00000402434 THEMIS2Q5TEJ8 643 aa18.4■□□□□ 0.54
RTN4-207ENST00000402434 ZNF385CQ66K41 422 aaPredicted RBP18.4■□□□□ 0.54
RTN4-207ENST00000402434 FAM199XQ6PEV8 388 aaPredicted RBP18.4■□□□□ 0.54
RTN4-207ENST00000402434 ADAMTSL2Q86TH1 951 aa18.4■□□□□ 0.54
RTN4-207ENST00000402434 PAQR7Q86WK9 346 aa18.4■□□□□ 0.54
RTN4-207ENST00000402434 ZNF655Q8N720 491 aaPredicted RBP18.4■□□□□ 0.54
RTN4-207ENST00000402434 OR56A3Q8NH54 315 aa18.4■□□□□ 0.54
RTN4-207ENST00000402434 DPH2Q9BQC3 489 aaPredicted RBP18.4■□□□□ 0.54
RTN4-207ENST00000402434 UTP6Q9NYH9 597 aaKnown RBP18.4■□□□□ 0.54
RTN4-207ENST00000402434 CTNNAL1Q9UBT7 734 aa18.4■□□□□ 0.54
RTN4-207ENST00000402434 KCND3Q9UK17 655 aa18.4■□□□□ 0.54
RTN4-207ENST00000402434 SRPK3Q9UPE1 567 aa18.4■□□□□ 0.54
RTN4-207ENST00000402434 PABPN1LA6NDY0 278 aaKnown RBP18.39■□□□□ 0.54
RTN4-207ENST00000402434 NPPBP16860 134 aa18.39■□□□□ 0.54
RTN4-207ENST00000402434 CSRP3P50461 194 aa18.39■□□□□ 0.54
RTN4-207ENST00000402434 DNASE1L3Q13609 305 aa18.39■□□□□ 0.54
RTN4-207ENST00000402434 TSNQ15631 228 aaKnown RBP18.39■□□□□ 0.54
RTN4-207ENST00000402434 CRTC2Q53ET0 693 aaPredicted RBP18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms