RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 FAM234BA2RU67 622 aa24.77■■□□□ 1.56
CPNE1-205ENST00000401607 ASPDHA6ND91 283 aa24.77■■□□□ 1.56
CPNE1-205ENST00000401607 POLR2JP52435 117 aaKnown RBP24.77■■□□□ 1.56
CPNE1-205ENST00000401607 KCNK10P57789 538 aa24.77■■□□□ 1.56
CPNE1-205ENST00000401607 ZP2Q05996 745 aa24.77■■□□□ 1.56
CPNE1-205ENST00000401607 CSTF3Q12996 717 aaKnown RBP24.77■■□□□ 1.56
CPNE1-205ENST00000401607 PIGGQ5H8A4 983 aa24.77■■□□□ 1.56
CPNE1-205ENST00000401607 PRAMEF14Q5SWL7 426 aa24.77■■□□□ 1.56
CPNE1-205ENST00000401607 PRAMEF13Q5VWM6 474 aa24.77■■□□□ 1.56
CPNE1-205ENST00000401607 ATG9BQ674R7 924 aa24.77■■□□□ 1.56
CPNE1-205ENST00000401607 LCTLQ6UWM7 567 aa24.77■■□□□ 1.56
CPNE1-205ENST00000401607 SETD7Q8WTS6 366 aaKnown RBP24.77■■□□□ 1.56
CPNE1-205ENST00000401607 SLC5A11Q8WWX8 675 aa24.77■■□□□ 1.56
CPNE1-205ENST00000401607 CMTM7Q96FZ5 175 aa24.77■■□□□ 1.56
CPNE1-205ENST00000401607 FERD3LQ96RJ6 166 aa24.77■■□□□ 1.56
CPNE1-205ENST00000401607 A0A1W2PP18 115 aa24.77■■□□□ 1.56
CPNE1-205ENST00000401607 FAM170BA6NMN3 283 aa24.77■■□□□ 1.56
CPNE1-205ENST00000401607 ANGPT2O15123 496 aa24.77■■□□□ 1.56
CPNE1-205ENST00000401607 CCND1P24385 295 aa24.77■■□□□ 1.56
CPNE1-205ENST00000401607 HTR1BP28222 390 aa24.77■■□□□ 1.56
CPNE1-205ENST00000401607 ACTR3P61158 418 aa24.77■■□□□ 1.56
CPNE1-205ENST00000401607 YPEL5P62699 121 aa24.77■■□□□ 1.56
CPNE1-205ENST00000401607 COQ5Q5HYK3 327 aa24.77■■□□□ 1.56
CPNE1-205ENST00000401607 C1orf146Q5VVC0 180 aa24.77■■□□□ 1.56
CPNE1-205ENST00000401607 ADNP2Q6IQ32 1131 aa24.77■■□□□ 1.56
CPNE1-205ENST00000401607 LAYNQ6UX15 382 aa24.77■■□□□ 1.56
CPNE1-205ENST00000401607 FRMD1Q8N878 549 aa24.77■■□□□ 1.56
CPNE1-205ENST00000401607 PCYOX1LQ8NBM8 494 aa24.77■■□□□ 1.56
CPNE1-205ENST00000401607 VPS33AQ96AX1 596 aa24.77■■□□□ 1.56
CPNE1-205ENST00000401607 APIPQ96GX9 242 aa24.77■■□□□ 1.56
CPNE1-205ENST00000401607 PRDM8Q9NQV8 689 aa24.77■■□□□ 1.56
CPNE1-205ENST00000401607 IMP3Q9NV31 184 aaKnown RBP24.77■■□□□ 1.56
CPNE1-205ENST00000401607 FBXL21Q9UKT6 434 aa24.77■■□□□ 1.56
CPNE1-205ENST00000401607 PCDHGA11Q9Y5H2 935 aa24.77■■□□□ 1.56
CPNE1-205ENST00000401607 PDZK1P1A8MUH7 402 aa24.76■■□□□ 1.55
CPNE1-205ENST00000401607 C1GALT1C1LP0DN25 315 aa24.76■■□□□ 1.55
CPNE1-205ENST00000401607 JAK1P23458 1154 aa24.76■■□□□ 1.55
CPNE1-205ENST00000401607 HSD17B2P37059 387 aa24.76■■□□□ 1.55
CPNE1-205ENST00000401607 PTGR1Q14914 329 aa24.76■■□□□ 1.55
CPNE1-205ENST00000401607 UAP1L1Q3KQV9 507 aa24.76■■□□□ 1.55
CPNE1-205ENST00000401607 USP39Q53GS9 565 aaKnown RBP24.76■■□□□ 1.55
CPNE1-205ENST00000401607 C6orf163Q5TEZ5 329 aa24.76■■□□□ 1.55
CPNE1-205ENST00000401607 LIX1Q8N485 282 aa24.76■■□□□ 1.55
CPNE1-205ENST00000401607 OR7G3Q8NG95 312 aa24.76■■□□□ 1.55
CPNE1-205ENST00000401607 TSACCQ96A04 125 aaPredicted RBP24.76■■□□□ 1.55
CPNE1-205ENST00000401607 ROPN1LQ96C74 230 aa24.76■■□□□ 1.55
CPNE1-205ENST00000401607 BIRC7Q96CA5 298 aa24.76■■□□□ 1.55
CPNE1-205ENST00000401607 CCDC124Q96CT7 223 aaKnown RBP24.76■■□□□ 1.55
CPNE1-205ENST00000401607 GPR174Q9BXC1 333 aa24.76■■□□□ 1.55
CPNE1-205ENST00000401607 EHD1Q9H4M9 534 aa24.76■■□□□ 1.55
CPNE1-205ENST00000401607 SPATA6Q9NWH7 488 aaPredicted RBP24.76■■□□□ 1.55
CPNE1-205ENST00000401607 POMPQ9Y244 141 aa24.76■■□□□ 1.55
CPNE1-205ENST00000401607 CD6P30203 668 aa24.75■■□□□ 1.55
CPNE1-205ENST00000401607 OXTRP30559 389 aa24.75■■□□□ 1.55
CPNE1-205ENST00000401607 THOP1P52888 689 aa24.75■■□□□ 1.55
CPNE1-205ENST00000401607 CEACAM7Q14002 265 aa24.75■■□□□ 1.55
CPNE1-205ENST00000401607 ZNF423Q2M1K9 1284 aa24.75■■□□□ 1.55
CPNE1-205ENST00000401607 THEMIS2Q5TEJ8 643 aa24.75■■□□□ 1.55
CPNE1-205ENST00000401607 CACHD1Q5VU97 1274 aa24.75■■□□□ 1.55
CPNE1-205ENST00000401607 NXPE4Q6UWF7 544 aa24.75■■□□□ 1.55
CPNE1-205ENST00000401607 ABI3BPQ7Z7G0 1075 aa24.75■■□□□ 1.55
CPNE1-205ENST00000401607 NUDT8Q8WV74 236 aa24.75■■□□□ 1.55
CPNE1-205ENST00000401607 MTERF1Q99551 399 aaKnown RBP24.75■■□□□ 1.55
CPNE1-205ENST00000401607 SERPINI1Q99574 410 aa24.75■■□□□ 1.55
CPNE1-205ENST00000401607 TPSD1Q9BZJ3 242 aa24.75■■□□□ 1.55
CPNE1-205ENST00000401607 GEMIN8Q9NWZ8 242 aaKnown RBP24.75■■□□□ 1.55
CPNE1-205ENST00000401607 CROTQ9UKG9 612 aa24.75■■□□□ 1.55
CPNE1-205ENST00000401607 DLGAP4Q9Y2H0 992 aa24.75■■□□□ 1.55
CPNE1-205ENST00000401607 OR52A4PA6NMU1 304 aa24.75■■□□□ 1.55
CPNE1-205ENST00000401607 PRAMEF26H0Y7S4 382 aa24.75■■□□□ 1.55
CPNE1-205ENST00000401607 TNFRSF10CO14798 259 aa24.75■■□□□ 1.55
CPNE1-205ENST00000401607 BCKDHAP12694 445 aa24.75■■□□□ 1.55
CPNE1-205ENST00000401607 DDX39BQ13838 428 aaKnown RBP24.75■■□□□ 1.55
CPNE1-205ENST00000401607 SLBPQ14493 270 aaKnown RBP eCLIP24.75■■□□□ 1.55
CPNE1-205ENST00000401607 TLR1Q15399 786 aa24.75■■□□□ 1.55
CPNE1-205ENST00000401607 MED27Q6P2C8 311 aa24.75■■□□□ 1.55
CPNE1-205ENST00000401607 Q6ZSR6 202 aa24.75■■□□□ 1.55
CPNE1-205ENST00000401607 RD3Q7Z3Z2 195 aa24.75■■□□□ 1.55
CPNE1-205ENST00000401607 SIX5Q8N196 739 aa24.75■■□□□ 1.55
CPNE1-205ENST00000401607 SHDQ96IW2 340 aa24.75■■□□□ 1.55
CPNE1-205ENST00000401607 CAMK1GQ96NX5 476 aa24.75■■□□□ 1.55
CPNE1-205ENST00000401607 EFCAB11Q9BUY7 163 aa24.75■■□□□ 1.55
CPNE1-205ENST00000401607 SPNS1Q9H2V7 528 aa24.75■■□□□ 1.55
CPNE1-205ENST00000401607 SCHIP1Q9P0W5 487 aaPredicted RBP24.75■■□□□ 1.55
CPNE1-205ENST00000401607 CCDC154A6NI56 674 aa24.74■■□□□ 1.55
CPNE1-205ENST00000401607 EEDO75530 441 aaKnown RBP24.74■■□□□ 1.55
CPNE1-205ENST00000401607 AMD1P17707 334 aa24.74■■□□□ 1.55
CPNE1-205ENST00000401607 RPE65Q16518 533 aa24.74■■□□□ 1.55
CPNE1-205ENST00000401607 ALG11Q2TAA5 492 aa24.74■■□□□ 1.55
CPNE1-205ENST00000401607 TIGD2Q4W5G0 525 aa24.74■■□□□ 1.55
CPNE1-205ENST00000401607 PRPF38BQ5VTL8 546 aaKnown RBP24.74■■□□□ 1.55
CPNE1-205ENST00000401607 OR13H1Q8NG92 308 aa24.74■■□□□ 1.55
CPNE1-205ENST00000401607 HUS1BQ8NHY5 278 aa24.74■■□□□ 1.55
CPNE1-205ENST00000401607 RLN3Q8WXF3 142 aa24.74■■□□□ 1.55
CPNE1-205ENST00000401607 FCRL1Q96LA6 429 aa24.74■■□□□ 1.55
CPNE1-205ENST00000401607 SLC39A3Q9BRY0 314 aa24.74■■□□□ 1.55
CPNE1-205ENST00000401607 HAUS8Q9BT25 410 aa24.74■■□□□ 1.55
CPNE1-205ENST00000401607 RNPEPL1Q9HAU8 725 aa24.74■■□□□ 1.55
CPNE1-205ENST00000401607 BRF2Q9HAW0 419 aa24.74■■□□□ 1.55
CPNE1-205ENST00000401607 NKX1-2Q9UD57 310 aaPredicted RBP24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms