RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 CD6P30203 668 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 HGSNATQ68CP4 663 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 RANBP3LQ86VV4 465 aaPredicted RBP8.2□□□□□ -1.1
CHD8-201ENST00000399982 RADILQ96JH8 1075 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 GAD1Q99259 594 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 BTBD1Q9H0C5 482 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 PPM1HQ9ULR3 514 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 CBY1Q9Y3M2 126 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 TRAV19A0A0A6YYK7 116 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 IFNA1P01562 189 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 LPOP22079 712 aaPredicted RBP8.2□□□□□ -1.1
CHD8-201ENST00000399982 PIGGQ5H8A4 983 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 OR2T5Q6IEZ7 315 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 OR6K6Q8NGW6 343 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 OR2T29Q8NH02 315 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 SLC13A3Q8WWT9 602 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 GIMAP5Q96F15 307 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 TBX5Q99593 518 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 PAQR5Q9NXK6 330 aaPredicted RBP8.2□□□□□ -1.1
CHD8-201ENST00000399982 HAO2Q9NYQ3 351 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 TBC1D3DA0A087WVF3 549 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 TBC1D3IA0A087WXS9 549 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 TBC1D3EA0A087X179 549 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 TBC1D3KA0A087X1G2 549 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 TBC1D3FA6NER0 549 aaPredicted RBP8.2□□□□□ -1.1
CHD8-201ENST00000399982 TBC1D3LB9A6J9 549 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 J3QRK9 145 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 ACKR2O00590 384 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 FPGTO14772 594 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 IFNA4P05014 189 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 PCCBP05166 539 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 TBC1D3HP0C7X1 549 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 LINC00032P0C843 101 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 FUT4P22083 530 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 DCST2Q5T1A1 773 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 MPP7Q5T2T1 576 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 KIAA1614Q5VZ46 1190 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 TBC1D3GQ6DHY5 549 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 TBC1D3CQ6IPX1 549 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 SLC30A10Q6XR72 485 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 TBC1D3Q8IZP1 549 aaPredicted RBP8.2□□□□□ -1.1
CHD8-201ENST00000399982 ADAMTS15Q8TE58 950 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 BTF3L4Q96K17 158 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 SNX27Q96L92 541 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 C17orf62Q9BQA9 187 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 ZDHHC18Q9NUE0 388 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 PMM2O15305 246 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 MPPED1O15442 326 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 RASAL1O95294 804 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 CHRNA1P02708 482 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 IGFBP1P08833 259 aaPredicted RBP8.2□□□□□ -1.1
CHD8-201ENST00000399982 TMEM11P17152 192 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 EIF2DP41214 584 aaKnown RBP8.2□□□□□ -1.1
CHD8-201ENST00000399982 GRK6P43250 576 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 PSMA6P60900 246 aaKnown RBP8.2□□□□□ -1.1
CHD8-201ENST00000399982 SNRPD1P62314 119 aaKnown RBP8.2□□□□□ -1.1
CHD8-201ENST00000399982 HACD2Q6Y1H2 254 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 POGLUT1Q8NBL1 392 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 CRAMP1Q96RY5 1269 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 AARSD1Q9BTE6 412 aaKnown RBP8.2□□□□□ -1.1
CHD8-201ENST00000399982 DUSP16Q9BY84 665 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 SLC6A16Q9GZN6 736 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 MRM3Q9HC36 420 aaKnown RBP8.2□□□□□ -1.1
CHD8-201ENST00000399982 SRRDQ9UH36 339 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 OAZ3Q9UMX2 235 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 TRBV23OR9-2A0A075B6M9 112 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 WDPCPO95876 746 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 RENP00797 406 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 EEF1A1P68104 462 aaKnown RBP8.19□□□□□ -1.1
CHD8-201ENST00000399982 HEPACAMQ14CZ8 416 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 EEF1A1P5Q5VTE0 462 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 SLC8B1Q6J4K2 584 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 TIFABQ6ZNK6 161 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 CARM1Q86X55 608 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 OR4L1Q8NH43 312 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 MTG2Q9H4K7 406 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 FANCFQ9NPI8 374 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 TAS2R8Q9NYW2 309 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 COMMD3Q9UBI1 195 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 A0A1W2PPW3 197 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 ZNF705FA8MVS1 300 aaPredicted RBP8.19□□□□□ -1.1
CHD8-201ENST00000399982 HTRA2O43464 458 aaPredicted RBP8.19□□□□□ -1.1
CHD8-201ENST00000399982 BRINP1O60477 761 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 OXSR1O95747 527 aaPredicted RBP8.19□□□□□ -1.1
CHD8-201ENST00000399982 ZNF705DP0CH99 300 aaPredicted RBP8.19□□□□□ -1.1
CHD8-201ENST00000399982 ZNF705BP0CI00 300 aaPredicted RBP8.19□□□□□ -1.1
CHD8-201ENST00000399982 HNRNPLP14866 589 aaKnown RBP eCLIP8.19□□□□□ -1.1
CHD8-201ENST00000399982 ENDOUP21128 410 aaKnown RBP8.19□□□□□ -1.1
CHD8-201ENST00000399982 VAMP1P23763 118 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 RARRES1P49788 294 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 CRISP1P54107 249 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 SMARCB1Q12824 385 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 SEC23BQ15437 767 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 HES5Q5TA89 166 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 CCBE1Q6UXH8 406 aaPredicted RBP8.19□□□□□ -1.1
CHD8-201ENST00000399982 TMED4Q7Z7H5 227 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 ZFPM1Q8IX07 1006 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 DNERQ8NFT8 737 aa8.19□□□□□ -1.1
CHD8-201ENST00000399982 C7orf50Q9BRJ6 194 aaKnown RBP8.19□□□□□ -1.1
CHD8-201ENST00000399982 ZDHHC7Q9NXF8 308 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms