RNA–Protein interactions for RNA: ENST00000399429.7

COL28A1-201, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL28A1, Length 4,277 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-201ENST00000399429 OSMRQ99650 979 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 HDHD5Q9BXW7 423 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 BCO2Q9BYV7 579 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 PPA2Q9H2U2 334 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 FARSBQ9NSD9 589 aaKnown RBP9.08□□□□□ -0.96
COL28A1-201ENST00000399429 TEX51A0A1B0GUA7 166 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 TCRBV5S1A1TA0A578 114 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 CLDN24A6NM45 220 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 PGRMC2O15173 223 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 RECQL4O94761 1208 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 CCNDBP1O95273 360 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 PAICSP22234 425 aaKnown RBP9.08□□□□□ -0.96
COL28A1-201ENST00000399429 BMPR1AP36894 532 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 TSPAN5P62079 268 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 CDH18Q13634 790 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 GPR19Q15760 415 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 PROX2Q3B8N5 592 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 C22orf42Q6IC83 251 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 Q6ZPB1 254 aaPredicted RBP9.08□□□□□ -0.96
COL28A1-201ENST00000399429 RBM23Q86U06 439 aaKnown RBP9.08□□□□□ -0.96
COL28A1-201ENST00000399429 FBXO16Q8IX29 292 aaPredicted RBP9.08□□□□□ -0.96
COL28A1-201ENST00000399429 MFSD4AQ8N468 514 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 FAM86B1Q8N7N1 296 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 SIDT2Q8NBJ9 832 aaKnown RBP9.08□□□□□ -0.96
COL28A1-201ENST00000399429 OR6F1Q8NGZ6 308 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 POP5Q969H6 163 aaKnown RBP9.08□□□□□ -0.96
COL28A1-201ENST00000399429 RHNO1Q9BSD3 238 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 EBPLQ9BY08 206 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 NLNQ9BYT8 704 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 POLR1EQ9GZS1 481 aaKnown RBP9.08□□□□□ -0.96
COL28A1-201ENST00000399429 PCDHB16Q9NRJ7 776 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 TVP23BQ9NYZ1 205 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 DNAJC27Q9NZQ0 273 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 VAPAQ9P0L0 249 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 PCDHA9Q9Y5H5 950 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 YJEFN3A6XGL0 299 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 SLC7A4O43246 635 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 MATN4O95460 622 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 NPPAP01160 153 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 PIGRP01833 764 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 KELP23276 732 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 CHRNA5P30532 468 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 RYKP34925 604 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 GRM5P41594 1212 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 ISL1P61371 349 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 GTF2H2Q13888 395 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 CYP27C1Q4G0S4 372 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 BCL2L15Q5TBC7 163 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 GTF2IRD2BQ6EKJ0 949 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 GTF2H2CQ6P1K8 395 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 HFE2Q6ZVN8 426 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 DPP9Q86TI2 863 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 ISCA2Q86U28 154 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 GTF2IRD2Q86UP8 949 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 SETD6Q8TBK2 473 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 NETO1Q8TDF5 533 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 PPP1R13LQ8WUF5 828 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 ST8SIA2Q92186 375 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 TESCQ96BS2 214 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 MAGEB10Q96LZ2 347 aaPredicted RBP9.08□□□□□ -0.96
COL28A1-201ENST00000399429 RIPOR3Q96MK2 946 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 C2orf49Q9BVC5 232 aaPredicted RBP9.08□□□□□ -0.96
COL28A1-201ENST00000399429 EMC3Q9P0I2 261 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 MKL2Q9ULH7 1088 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 ARL5AQ9Y689 179 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 STYXL1Q9Y6J8 313 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 RICTORQ6R327 1708 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 SPATA31C2B4DYI2 1134 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 CLIC1O00299 241 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 SGTAO43765 313 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 SSX4O60224 188 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 ACSL4O60488 711 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 RFPL3O75679 317 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 CYP2A6P11509 494 aaPredicted RBP9.08□□□□□ -0.96
COL28A1-201ENST00000399429 ANXA3P12429 323 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 MAGEA2P43356 314 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 RGS6P49758 472 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 CDKN2DP55273 166 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 RPS14P62263 151 aaKnown RBP9.08□□□□□ -0.96
COL28A1-201ENST00000399429 CLDN10P78369 228 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 GALK2Q01415 458 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 KCNA10Q16322 511 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 DALRD3Q5D0E6 543 aaKnown RBP9.08□□□□□ -0.96
COL28A1-201ENST00000399429 CLVS2Q5SYC1 327 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 CTU1Q7Z7A3 348 aaKnown RBP9.08□□□□□ -0.96
COL28A1-201ENST00000399429 ADAMTSL2Q86TH1 951 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 KRTCAP2Q8N6L1 136 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 ATP6V1C2Q8NEY4 427 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 REPS2Q8NFH8 660 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 GPR156Q8NFN8 814 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 TFB2MQ9H5Q4 396 aaKnown RBP9.08□□□□□ -0.96
COL28A1-201ENST00000399429 IGSF5Q9NSI5 407 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 NPAP1Q9NZP6 1156 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 L7N2F9 121 aa9.07□□□□□ -0.96
COL28A1-201ENST00000399429 B3GAT3O94766 335 aa9.07□□□□□ -0.96
COL28A1-201ENST00000399429 ARIH2O95376 493 aa9.07□□□□□ -0.96
COL28A1-201ENST00000399429 ANXA8P13928 327 aa9.07□□□□□ -0.96
COL28A1-201ENST00000399429 PKMP14618 531 aaKnown RBP9.07□□□□□ -0.96
COL28A1-201ENST00000399429 DNAJB1P25685 340 aa9.07□□□□□ -0.96
COL28A1-201ENST00000399429 MLLT3P42568 568 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms