RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 SCAMP4Q969E2 229 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 GTPBP3Q969Y2 492 aaKnown RBP13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 C1GALT1C1Q96EU7 318 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 SLC35A5Q9BS91 424 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 CSNK1G1Q9HCP0 422 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 MTMR10Q9NXD2 777 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 TAC3Q9UHF0 121 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 SLX4Q8IY92 1834 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 PRSS51A0A1B0GVH4 220 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 NOBOXO60393 691 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 MPIP34949 423 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 PKDCCQ504Y2 493 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 PSAPL1Q6NUJ1 521 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 CXXC5Q7LFL8 322 aaKnown RBP13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 DCUN1D3Q8IWE4 304 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 A0A0G2JN53 185 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 DUXAA6NLW8 204 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 KMOO15229 486 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 SNNO75324 88 aaPredicted RBP13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 NRIP1P48552 1158 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 OR9A1PQ8NGU1 263 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 LRCH3Q96II8 777 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 TMEM74Q96NL1 305 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 HERC2P3Q9BVR0 1158 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 SIPA1L3O60292 1781 aaPredicted RBP13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 PDLIM1O00151 329 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 KLK1P06870 262 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 HLA-EP13747 358 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 PPP1R3AQ16821 1122 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 C10orf62Q5T681 223 aaPredicted RBP13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 UBAP2Q5T6F2 1119 aaKnown RBP13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 DENND5AQ6IQ26 1287 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 RANBP3LQ86VV4 465 aaPredicted RBP13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 FAM98AQ8NCA5 519 aaKnown RBP13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 PDPRQ8NCN5 879 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 ZUFSPQ96AP4 578 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 YTHDF1Q9BYJ9 559 aaKnown RBP13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 SLC2A11Q9BYW1 496 aa13.86□□□□□ -0.19
PCDHGA11-201ENST00000398587 DSTNP60981 165 aa13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 TMPRSS11AQ6ZMR5 421 aa13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 P2RY8Q86VZ1 359 aa13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 GPR65Q8IYL9 337 aa13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 ZNF563Q8TA94 476 aa13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 UBASH3BQ8TF42 649 aa13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 SLC5A11Q8WWX8 675 aa13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 NSUN5Q96P11 429 aaKnown RBP13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 SLC38A3Q99624 504 aa13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 DNAAF2Q9NVR5 837 aaKnown RBP13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 RIMKLBQ9ULI2 386 aa13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 POU2F1P14859 743 aa13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 DNAJA1P31689 397 aaKnown RBP13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 PREPP48147 710 aa13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 CDKN2DP55273 166 aa13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 TAF13Q15543 124 aa13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 RAB30Q15771 203 aa13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 OR2T5Q6IEZ7 315 aa13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 SLC39A5Q6ZMH5 540 aa13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 KCTD8Q6ZWB6 473 aa13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 OR2T29Q8NH02 315 aa13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 GLYATL1Q969I3 302 aa13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 TMBIM1Q969X1 311 aa13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 SLC7A6OSQ96CW6 309 aaPredicted RBP13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 TPT1P8Q9HAU6 139 aa13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 PTTG2Q9NZH5 202 aa13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 MRPS7Q9Y2R9 242 aaKnown RBP13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 LRRC42Q9Y546 428 aa13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 MYH7BA7E2Y1 1941 aa13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 CITO14578 2027 aa13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 DHRS4L1P0CG22 281 aa13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 ACRV1P26436 265 aa13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 ETV4P43268 484 aa13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 NCBP2P52298 156 aaKnown RBP eCLIP13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 GRIK2Q13002 908 aa13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 NCEH1Q6PIU2 408 aa13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 IL1RAPQ9NPH3 570 aa13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 N6AMT1Q9Y5N5 214 aa13.85□□□□□ -0.19
PCDHGA11-201ENST00000398587 IL7RP16871 459 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 GLDCP23378 1020 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 MINDY4Q4G0A6 757 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 GPR153Q6NV75 609 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 SATL1Q86VE3 508 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 TMEM145Q8NBT3 493 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 BIRC7Q96CA5 298 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 CAMK1GQ96NX5 476 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 RACGAP1Q9H0H5 632 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 MEAF6Q9HAF1 191 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 CLDND1Q9NY35 253 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 SLCO3A1Q9UIG8 710 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 OARD1Q9Y530 152 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 MYO18AQ92614 2054 aaKnown RBP13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 HAT1O14929 419 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 SLC16A5O15375 505 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 ERI3O43414 337 aaKnown RBP13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 GRID2O43424 1007 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 CST5P28325 142 aaPredicted RBP13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 PGGT1BP53609 377 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 RAB41Q5JT25 222 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 TRAM1L1Q8N609 369 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 ZNF570Q96NI8 536 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 COL21A1Q96P44 957 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms