RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 CACNA2D3Q8IZS8 1091 aa20.46■□□□□ 0.87
CPNE1-204ENST00000397443 CCDC197Q8NCU1 140 aa20.46■□□□□ 0.87
CPNE1-204ENST00000397443 RILPQ96NA2 401 aa20.46■□□□□ 0.87
CPNE1-204ENST00000397443 ISM1B1AKI9 464 aa20.45■□□□□ 0.86
CPNE1-204ENST00000397443 BTN3A3O00478 584 aa20.45■□□□□ 0.86
CPNE1-204ENST00000397443 ARHGAP33O14559 1287 aa20.45■□□□□ 0.86
CPNE1-204ENST00000397443 PIP5K1BO14986 540 aa20.45■□□□□ 0.86
CPNE1-204ENST00000397443 CHRM5P08912 532 aaPredicted RBP20.45■□□□□ 0.86
CPNE1-204ENST00000397443 LINC00032P0C843 101 aa20.45■□□□□ 0.86
CPNE1-204ENST00000397443 UROSP10746 265 aa20.45■□□□□ 0.86
CPNE1-204ENST00000397443 CDH1P12830 882 aa20.45■□□□□ 0.86
CPNE1-204ENST00000397443 PEBP1P30086 187 aaKnown RBP20.45■□□□□ 0.86
CPNE1-204ENST00000397443 DPP6P42658 865 aa20.45■□□□□ 0.86
CPNE1-204ENST00000397443 HTR6P50406 440 aa20.45■□□□□ 0.86
CPNE1-204ENST00000397443 MEF2AQ02078 507 aaPredicted RBP20.45■□□□□ 0.86
CPNE1-204ENST00000397443 ZNF423Q2M1K9 1284 aa20.45■□□□□ 0.86
CPNE1-204ENST00000397443 UGT3A2Q3SY77 523 aa20.45■□□□□ 0.86
CPNE1-204ENST00000397443 SLC23A3Q6PIS1 610 aa20.45■□□□□ 0.86
CPNE1-204ENST00000397443 TMEM26Q6ZUK4 368 aa20.45■□□□□ 0.86
CPNE1-204ENST00000397443 SDR16C5Q8N3Y7 309 aa20.45■□□□□ 0.86
CPNE1-204ENST00000397443 SLC5A11Q8WWX8 675 aa20.45■□□□□ 0.86
CPNE1-204ENST00000397443 STN1Q9H668 368 aaKnown RBP20.45■□□□□ 0.86
CPNE1-204ENST00000397443 CUEDC1Q9NWM3 386 aaPredicted RBP20.45■□□□□ 0.86
CPNE1-204ENST00000397443 VTI1BQ9UEU0 232 aa20.45■□□□□ 0.86
CPNE1-204ENST00000397443 SNRNP200O75643 2136 aaKnown RBP20.45■□□□□ 0.86
CPNE1-204ENST00000397443 ATP6AP2A0A1C7CYW4 349 aa20.45■□□□□ 0.86
CPNE1-204ENST00000397443 GSAPA4D1B5 854 aa20.45■□□□□ 0.86
CPNE1-204ENST00000397443 ATP6AP2O75787 350 aa20.45■□□□□ 0.86
CPNE1-204ENST00000397443 EPN2O95208 641 aa20.45■□□□□ 0.86
CPNE1-204ENST00000397443 TYRP1P17643 537 aa20.45■□□□□ 0.86
CPNE1-204ENST00000397443 POLR2CP19387 275 aaPredicted RBP20.45■□□□□ 0.86
CPNE1-204ENST00000397443 CD22P20273 847 aa20.45■□□□□ 0.86
CPNE1-204ENST00000397443 IDH3AP50213 366 aa20.45■□□□□ 0.86
CPNE1-204ENST00000397443 LCTLQ6UWM7 567 aa20.45■□□□□ 0.86
CPNE1-204ENST00000397443 C17orf64Q86WR6 236 aa20.45■□□□□ 0.86
CPNE1-204ENST00000397443 SETD7Q8WTS6 366 aaKnown RBP20.45■□□□□ 0.86
CPNE1-204ENST00000397443 FAR2Q96K12 515 aa20.45■□□□□ 0.86
CPNE1-204ENST00000397443 HAUS8Q9BT25 410 aa20.45■□□□□ 0.86
CPNE1-204ENST00000397443 NUSAP1Q9BXS6 441 aaKnown RBP20.45■□□□□ 0.86
CPNE1-204ENST00000397443 KCNK4Q9NYG8 393 aa20.45■□□□□ 0.86
CPNE1-204ENST00000397443 OR6C2Q9NZP2 312 aa20.45■□□□□ 0.86
CPNE1-204ENST00000397443 ARL2BPQ9Y2Y0 163 aa20.45■□□□□ 0.86
CPNE1-204ENST00000397443 SLCO1B7G3V0H7 640 aa20.44■□□□□ 0.86
CPNE1-204ENST00000397443 CHEK2O96017 543 aa20.44■□□□□ 0.86
CPNE1-204ENST00000397443 SF1Q15637 639 aaKnown RBP20.44■□□□□ 0.86
CPNE1-204ENST00000397443 C6orf132Q5T0Z8 1188 aa20.44■□□□□ 0.86
CPNE1-204ENST00000397443 NXNQ6DKJ4 435 aa20.44■□□□□ 0.86
CPNE1-204ENST00000397443 EPGNQ6UW88 154 aa20.44■□□□□ 0.86
CPNE1-204ENST00000397443 IL27RAQ6UWB1 636 aa20.44■□□□□ 0.86
CPNE1-204ENST00000397443 SLCO4C1Q6ZQN7 724 aa20.44■□□□□ 0.86
CPNE1-204ENST00000397443 ADGRF3Q8IZF5 1079 aa20.44■□□□□ 0.86
CPNE1-204ENST00000397443 LRFN3Q9BTN0 628 aa20.44■□□□□ 0.86
CPNE1-204ENST00000397443 TUBB1Q9H4B7 451 aa20.44■□□□□ 0.86
CPNE1-204ENST00000397443 FARSBQ9NSD9 589 aaKnown RBP20.44■□□□□ 0.86
CPNE1-204ENST00000397443 TRPS1Q9UHF7 1281 aa20.44■□□□□ 0.86
CPNE1-204ENST00000397443 PCDHB11Q9Y5F2 797 aa20.44■□□□□ 0.86
CPNE1-204ENST00000397443 CSNK1G3Q9Y6M4 447 aa20.44■□□□□ 0.86
CPNE1-204ENST00000397443 WFS1O76024 890 aa20.43■□□□□ 0.86
CPNE1-204ENST00000397443 ENO1P06733 434 aaKnown RBP20.43■□□□□ 0.86
CPNE1-204ENST00000397443 GIMD1P0DJR0 217 aa20.43■□□□□ 0.86
CPNE1-204ENST00000397443 ALOX15P16050 662 aaPredicted RBP20.43■□□□□ 0.86
CPNE1-204ENST00000397443 NEK2P51955 445 aa20.43■□□□□ 0.86
CPNE1-204ENST00000397443 NUBP1P53384 320 aa20.43■□□□□ 0.86
CPNE1-204ENST00000397443 ZRSR2Q15696 482 aaKnown RBP20.43■□□□□ 0.86
CPNE1-204ENST00000397443 C14orf28Q4W4Y0 310 aa20.43■□□□□ 0.86
CPNE1-204ENST00000397443 HMGCLL1Q8TB92 370 aa20.43■□□□□ 0.86
CPNE1-204ENST00000397443 SAP25Q8TEE9 199 aa20.43■□□□□ 0.86
CPNE1-204ENST00000397443 C19orf60Q96EN9 201 aa20.43■□□□□ 0.86
CPNE1-204ENST00000397443 OR52B2Q96RD2 323 aa20.43■□□□□ 0.86
CPNE1-204ENST00000397443 GPRC5BQ9NZH0 403 aa20.43■□□□□ 0.86
CPNE1-204ENST00000397443 KLHL20Q9Y2M5 609 aa20.43■□□□□ 0.86
CPNE1-204ENST00000397443 PIPSLA2A3N6 862 aa20.43■□□□□ 0.86
CPNE1-204ENST00000397443 H7BY64 318 aa20.43■□□□□ 0.86
CPNE1-204ENST00000397443 SYPP08247 313 aa20.43■□□□□ 0.86
CPNE1-204ENST00000397443 ENGP17813 658 aa20.43■□□□□ 0.86
CPNE1-204ENST00000397443 HK2P52789 917 aa20.43■□□□□ 0.86
CPNE1-204ENST00000397443 SLBPQ14493 270 aaKnown RBP eCLIP20.43■□□□□ 0.86
CPNE1-204ENST00000397443 ICE2Q659A1 982 aa20.43■□□□□ 0.86
CPNE1-204ENST00000397443 OGFOD3Q6PK18 319 aa20.43■□□□□ 0.86
CPNE1-204ENST00000397443 ADCK2Q7Z695 626 aa20.43■□□□□ 0.86
CPNE1-204ENST00000397443 ALYREFQ86V81 257 aaKnown RBP20.43■□□□□ 0.86
CPNE1-204ENST00000397443 SLC35F3Q8IY50 421 aa20.43■□□□□ 0.86
CPNE1-204ENST00000397443 ANKS4BQ8N8V4 417 aa20.43■□□□□ 0.86
CPNE1-204ENST00000397443 L3MBTL4Q8NA19 623 aa20.43■□□□□ 0.86
CPNE1-204ENST00000397443 GPR156Q8NFN8 814 aa20.43■□□□□ 0.86
CPNE1-204ENST00000397443 OR2A1Q8NGT9 310 aa20.43■□□□□ 0.86
CPNE1-204ENST00000397443 ZFPM2Q8WW38 1151 aa20.43■□□□□ 0.86
CPNE1-204ENST00000397443 CCT6BQ92526 530 aa20.43■□□□□ 0.86
CPNE1-204ENST00000397443 C3orf30Q96M34 536 aa20.43■□□□□ 0.86
CPNE1-204ENST00000397443 PRAP1Q96NZ9 151 aa20.43■□□□□ 0.86
CPNE1-204ENST00000397443 SLC38A3Q99624 504 aa20.43■□□□□ 0.86
CPNE1-204ENST00000397443 SIKE1Q9BRV8 207 aa20.43■□□□□ 0.86
CPNE1-204ENST00000397443 PCBD2Q9H0N5 130 aa20.43■□□□□ 0.86
CPNE1-204ENST00000397443 GIMAP2Q9UG22 337 aa20.43■□□□□ 0.86
CPNE1-204ENST00000397443 RALGAPA1Q6GYQ0 2036 aa20.42■□□□□ 0.86
CPNE1-204ENST00000397443 TRPC5OSA6NMA1 111 aa20.42■□□□□ 0.86
CPNE1-204ENST00000397443 CER1O95813 267 aa20.42■□□□□ 0.86
CPNE1-204ENST00000397443 FASLGP48023 281 aa20.42■□□□□ 0.86
CPNE1-204ENST00000397443 CCT8P50990 548 aa20.42■□□□□ 0.86
CPNE1-204ENST00000397443 DDX39BQ13838 428 aaKnown RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms