RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 SLC5A11Q8WWX8 675 aa26.54■■□□□ 1.84
CPNE1-203ENST00000397442 CCDC28BQ9BUN5 200 aa26.54■■□□□ 1.84
CPNE1-203ENST00000397442 PCBD2Q9H0N5 130 aa26.54■■□□□ 1.84
CPNE1-203ENST00000397442 FARSBQ9NSD9 589 aaKnown RBP26.54■■□□□ 1.84
CPNE1-203ENST00000397442 OR6C2Q9NZP2 312 aa26.54■■□□□ 1.84
CPNE1-203ENST00000397442 ATP6AP2A0A1C7CYW4 349 aa26.54■■□□□ 1.84
CPNE1-203ENST00000397442 MANBAO00462 879 aa26.54■■□□□ 1.84
CPNE1-203ENST00000397442 ATP6AP2O75787 350 aa26.54■■□□□ 1.84
CPNE1-203ENST00000397442 DCTN3O75935 186 aa26.54■■□□□ 1.84
CPNE1-203ENST00000397442 BNIP3Q12983 259 aa26.54■■□□□ 1.84
CPNE1-203ENST00000397442 ABRAXAS2Q15018 415 aa26.54■■□□□ 1.84
CPNE1-203ENST00000397442 DEFB133Q30KQ1 61 aa26.54■■□□□ 1.84
CPNE1-203ENST00000397442 GRHL2Q6ISB3 625 aa26.54■■□□□ 1.84
CPNE1-203ENST00000397442 RNF165Q6ZSG1 346 aa26.54■■□□□ 1.84
CPNE1-203ENST00000397442 ACAD11Q709F0 780 aa26.54■■□□□ 1.84
CPNE1-203ENST00000397442 LARP4Q71RC2 724 aaKnown RBP eCLIP26.54■■□□□ 1.848e-24■□□□□ 9.5
CPNE1-203ENST00000397442 TRPM8Q7Z2W7 1104 aa26.54■■□□□ 1.84
CPNE1-203ENST00000397442 TMPRSS11BQ86T26 416 aa26.54■■□□□ 1.84
CPNE1-203ENST00000397442 SH3KBP1Q96B97 665 aa26.54■■□□□ 1.84
CPNE1-203ENST00000397442 MAGEB10Q96LZ2 347 aaPredicted RBP26.54■■□□□ 1.84
CPNE1-203ENST00000397442 NMUR2Q9GZQ4 415 aa26.54■■□□□ 1.84
CPNE1-203ENST00000397442 MYLK2Q9H1R3 596 aa26.54■■□□□ 1.84
CPNE1-203ENST00000397442 EHD1Q9H4M9 534 aa26.54■■□□□ 1.84
CPNE1-203ENST00000397442 SPHK1Q9NYA1 384 aa26.54■■□□□ 1.84
CPNE1-203ENST00000397442 DOLKQ9UPQ8 538 aa26.54■■□□□ 1.84
CPNE1-203ENST00000397442 VPS13AQ96RL7 3174 aa26.53■■□□□ 1.84
CPNE1-203ENST00000397442 TNFRSF10AO00220 468 aa26.53■■□□□ 1.84
CPNE1-203ENST00000397442 NOBOXO60393 691 aa26.53■■□□□ 1.84
CPNE1-203ENST00000397442 IFT88Q13099 833 aa26.53■■□□□ 1.84
CPNE1-203ENST00000397442 ZRSR2Q15696 482 aaKnown RBP26.53■■□□□ 1.84
CPNE1-203ENST00000397442 ATG9BQ674R7 924 aa26.53■■□□□ 1.84
CPNE1-203ENST00000397442 IL27RAQ6UWB1 636 aa26.53■■□□□ 1.84
CPNE1-203ENST00000397442 NXPE4Q6UWF7 544 aa26.53■■□□□ 1.84
CPNE1-203ENST00000397442 SLC9B2Q86UD5 537 aa26.53■■□□□ 1.84
CPNE1-203ENST00000397442 C17orf82Q86X59 251 aaPredicted RBP26.53■■□□□ 1.84
CPNE1-203ENST00000397442 ADGRF3Q8IZF5 1079 aa26.53■■□□□ 1.84
CPNE1-203ENST00000397442 SLC25A45Q8N413 288 aa26.53■■□□□ 1.84
CPNE1-203ENST00000397442 OR2T11Q8NH01 316 aa26.53■■□□□ 1.84
CPNE1-203ENST00000397442 USP7Q93009 1102 aa26.53■■□□□ 1.84
CPNE1-203ENST00000397442 PTCD3Q96EY7 689 aaKnown RBP26.53■■□□□ 1.84
CPNE1-203ENST00000397442 LRRC37BQ96QE4 947 aa26.53■■□□□ 1.84
CPNE1-203ENST00000397442 HBEGFQ99075 208 aa26.53■■□□□ 1.84
CPNE1-203ENST00000397442 FSCN3Q9NQT6 498 aa26.53■■□□□ 1.84
CPNE1-203ENST00000397442 CCT8L1PA6NM43 557 aa26.52■■□□□ 1.84
CPNE1-203ENST00000397442 E9PBE3 544 aa26.52■■□□□ 1.84
CPNE1-203ENST00000397442 BTN3A3O00478 584 aa26.52■■□□□ 1.84
CPNE1-203ENST00000397442 KLHL41O60662 606 aa26.52■■□□□ 1.84
CPNE1-203ENST00000397442 ANXA6P08133 673 aa26.52■■□□□ 1.84
CPNE1-203ENST00000397442 C1GALT1C1LP0DN25 315 aa26.52■■□□□ 1.84
CPNE1-203ENST00000397442 CDH1P12830 882 aa26.52■■□□□ 1.84
CPNE1-203ENST00000397442 HNF4AP41235 474 aa26.52■■□□□ 1.84
CPNE1-203ENST00000397442 MAZP56270 477 aaKnown RBP26.52■■□□□ 1.84
CPNE1-203ENST00000397442 HHEXQ03014 270 aa26.52■■□□□ 1.84
CPNE1-203ENST00000397442 OGFOD3Q6PK18 319 aa26.52■■□□□ 1.84
CPNE1-203ENST00000397442 PRR23BQ6ZRT6 265 aa26.52■■□□□ 1.84
CPNE1-203ENST00000397442 SRMSQ9H3Y6 488 aa26.52■■□□□ 1.84
CPNE1-203ENST00000397442 CAPN10Q9HC96 672 aa26.52■■□□□ 1.84
CPNE1-203ENST00000397442 CSNK1G3Q9Y6M4 447 aa26.52■■□□□ 1.84
CPNE1-203ENST00000397442 GALR2O43603 387 aaPredicted RBP26.51■■□□□ 1.83
CPNE1-203ENST00000397442 ULK1O75385 1050 aa26.51■■□□□ 1.83
CPNE1-203ENST00000397442 SERPINA6P08185 405 aa26.51■■□□□ 1.83
CPNE1-203ENST00000397442 CHRM5P08912 532 aaPredicted RBP26.51■■□□□ 1.83
CPNE1-203ENST00000397442 GRIK2Q13002 908 aa26.51■■□□□ 1.83
CPNE1-203ENST00000397442 DUOXA1Q1HG43 343 aa26.51■■□□□ 1.83
CPNE1-203ENST00000397442 ZNF423Q2M1K9 1284 aa26.51■■□□□ 1.83
CPNE1-203ENST00000397442 Q6ZSR9 355 aa26.51■■□□□ 1.83
CPNE1-203ENST00000397442 C17orf64Q86WR6 236 aa26.51■■□□□ 1.83
CPNE1-203ENST00000397442 CEP70Q8NHQ1 597 aa26.51■■□□□ 1.83
CPNE1-203ENST00000397442 CCT7Q99832 543 aa26.51■■□□□ 1.83
CPNE1-203ENST00000397442 AKTIPQ9H8T0 292 aa26.51■■□□□ 1.83
CPNE1-203ENST00000397442 GEMIN8Q9NWZ8 242 aaKnown RBP26.51■■□□□ 1.83
CPNE1-203ENST00000397442 CCL27Q9Y4X3 112 aa26.51■■□□□ 1.83
CPNE1-203ENST00000397442 H0YIV9 168 aa26.5■■□□□ 1.83
CPNE1-203ENST00000397442 FCHO1O14526 889 aa26.5■■□□□ 1.83
CPNE1-203ENST00000397442 KRT6AP02538 564 aa26.5■■□□□ 1.83
CPNE1-203ENST00000397442 KRT6BP04259 564 aa26.5■■□□□ 1.83
CPNE1-203ENST00000397442 GIMD1P0DJR0 217 aa26.5■■□□□ 1.83
CPNE1-203ENST00000397442 FASLGP48023 281 aa26.5■■□□□ 1.83
CPNE1-203ENST00000397442 KRT6CP48668 564 aa26.5■■□□□ 1.83
CPNE1-203ENST00000397442 ARRB1P49407 418 aaPredicted RBP26.5■■□□□ 1.83
CPNE1-203ENST00000397442 PLCL1Q15111 1095 aa26.5■■□□□ 1.83
CPNE1-203ENST00000397442 SPDYAQ5MJ70 313 aa26.5■■□□□ 1.83
CPNE1-203ENST00000397442 CHCHD2P9Q5T1J5 151 aaPredicted RBP26.5■■□□□ 1.83
CPNE1-203ENST00000397442 METTL21CQ5VZV1 264 aa26.5■■□□□ 1.83
CPNE1-203ENST00000397442 ICE2Q659A1 982 aa26.5■■□□□ 1.83
CPNE1-203ENST00000397442 TMEM198Q66K66 360 aa26.5■■□□□ 1.83
CPNE1-203ENST00000397442 NXNQ6DKJ4 435 aa26.5■■□□□ 1.83
CPNE1-203ENST00000397442 TMEM26Q6ZUK4 368 aa26.5■■□□□ 1.83
CPNE1-203ENST00000397442 ARL14Q8N4G2 192 aa26.5■■□□□ 1.83
CPNE1-203ENST00000397442 WDR20Q8TBZ3 569 aa26.5■■□□□ 1.83
CPNE1-203ENST00000397442 ERP27Q96DN0 273 aa26.5■■□□□ 1.83
CPNE1-203ENST00000397442 SPNS1Q9H2V7 528 aa26.5■■□□□ 1.83
CPNE1-203ENST00000397442 CUEDC1Q9NWM3 386 aaPredicted RBP26.5■■□□□ 1.83
CPNE1-203ENST00000397442 GIMAP2Q9UG22 337 aa26.5■■□□□ 1.83
CPNE1-203ENST00000397442 ZNF490Q9ULM2 529 aaPredicted RBP26.5■■□□□ 1.83
CPNE1-203ENST00000397442 SNX6Q9UNH7 406 aa26.5■■□□□ 1.83
CPNE1-203ENST00000397442 PCDHB11Q9Y5F2 797 aa26.5■■□□□ 1.83
CPNE1-203ENST00000397442 ERICH4A6NGS2 130 aa26.5■■□□□ 1.83
CPNE1-203ENST00000397442 PATE3B3GLJ2 98 aa26.5■■□□□ 1.83
CPNE1-203ENST00000397442 CFIP05156 583 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms