RNA–Protein interactions for RNA: ENST00000397381.4

UCA1-201, Transcript of urothelial cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene UCA1, Length 2,299 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-201ENST00000397381 ST3GAL5Q9UNP4 418 aa9.07□□□□□ -0.96
UCA1-201ENST00000397381 PCDHGA6Q9Y5G7 932 aa9.07□□□□□ -0.96
UCA1-201ENST00000397381 CENPXA8MT69 81 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 NDUFB5O43674 189 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 PARNO95453 639 aaKnown RBP9.06□□□□□ -0.96
UCA1-201ENST00000397381 KRT6AP02538 564 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 KRT6BP04259 564 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 TRAPPC2P0DI81 140 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 TRAPPC2BP0DI82 140 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 MAGP20916 626 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 MAPK1P28482 360 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 KDELR2P33947 212 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 SLC15A1P46059 708 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 PIK3CGP48736 1102 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 MRPS6P82932 125 aaKnown RBP9.06□□□□□ -0.96
UCA1-201ENST00000397381 VLDLRP98155 873 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.06□□□□□ -0.96
UCA1-201ENST00000397381 STARD3Q14849 445 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 CDK10Q15131 360 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 VMACQ2NL98 169 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 PAN2Q504Q3 1202 aaKnown RBP9.06□□□□□ -0.96
UCA1-201ENST00000397381 SGO1Q5FBB7 561 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 CBLL1Q75N03 491 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 ZSWIM9Q86XI8 627 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 GALNT6Q8NCL4 622 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 CLHC1Q8NHS4 586 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 C9orf43Q8TAL5 461 aaPredicted RBP9.06□□□□□ -0.96
UCA1-201ENST00000397381 NELL1Q92832 810 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 UBE2FQ969M7 185 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 ULK4Q96C45 1275 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 C8orf48Q96LL4 319 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 ADGRE3Q9BY15 652 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 MIR1-1HGQ9H1L0 117 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 RETREG1Q9H6L5 497 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 FARSBQ9NSD9 589 aaKnown RBP9.06□□□□□ -0.96
UCA1-201ENST00000397381 DDX28Q9NUL7 540 aaKnown RBP9.06□□□□□ -0.96
UCA1-201ENST00000397381 QPCTLQ9NXS2 382 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 WWOXQ9NZC7 414 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 TBC1D14Q9P2M4 693 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 UBA2Q9UBT2 640 aaPredicted RBP9.06□□□□□ -0.96
UCA1-201ENST00000397381 CFL2Q9Y281 166 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 BTBD3Q9Y2F9 522 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 TRPV2Q9Y5S1 764 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 AP1M2Q9Y6Q5 423 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 A0A075B6Q4 140 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 LOC100506127A0A0U1RQW1 187 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 NOTOA8MTQ0 251 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 RFXANKO14593 260 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 MFN2O95140 757 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 PRLP01236 227 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 IGLV3-27P01718 113 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 HOXD9P28356 352 aaPredicted RBP9.06□□□□□ -0.96
UCA1-201ENST00000397381 SLC19A1P41440 591 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 MRPS15P82914 257 aaKnown RBP9.06□□□□□ -0.96
UCA1-201ENST00000397381 CHRNEQ04844 493 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 CACNG1Q06432 222 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 IRF5Q13568 498 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 GRB14Q14449 540 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 EIF4HQ15056 248 aaKnown RBP9.06□□□□□ -0.96
UCA1-201ENST00000397381 TIMM50Q3ZCQ8 353 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 ZCCHC8Q6NZY4 707 aaKnown RBP9.06□□□□□ -0.96
UCA1-201ENST00000397381 TMC5Q6UXY8 1006 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.06□□□□□ -0.96
UCA1-201ENST00000397381 CERS6Q6ZMG9 384 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 SPATC1Q76KD6 591 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 ZZZ3Q8IYH5 903 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 NLGN4XQ8N0W4 816 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 BEND7Q8N7W2 519 aaPredicted RBP9.06□□□□□ -0.96
UCA1-201ENST00000397381 LPCAT1Q8NF37 534 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 ST13P5Q8NFI4 369 aaPredicted RBP9.06□□□□□ -0.96
UCA1-201ENST00000397381 GGHQ92820 318 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 HSH2DQ96JZ2 352 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 EGFL8Q99944 293 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 MYOCQ99972 504 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 ZBED2Q9BTP6 218 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 KATNAL1Q9BW62 490 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 TRMT13Q9NUP7 481 aaKnown RBP9.06□□□□□ -0.96
UCA1-201ENST00000397381 DKK3Q9UBP4 350 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 AGO1Q9UL18 857 aaKnown RBP9.06□□□□□ -0.96
UCA1-201ENST00000397381 PCDHGB2Q9Y5G2 931 aa9.06□□□□□ -0.96
UCA1-201ENST00000397381 PITPNM1O00562 1244 aa9.05□□□□□ -0.96
UCA1-201ENST00000397381 UGT2B17O75795 530 aa9.05□□□□□ -0.96
UCA1-201ENST00000397381 DIRAS1O95057 198 aa9.05□□□□□ -0.96
UCA1-201ENST00000397381 EPB42P16452 691 aa9.05□□□□□ -0.96
UCA1-201ENST00000397381 CR2P20023 1033 aa9.05□□□□□ -0.96
UCA1-201ENST00000397381 TACR2P21452 398 aa9.05□□□□□ -0.96
UCA1-201ENST00000397381 DGKAP23743 735 aa9.05□□□□□ -0.96
UCA1-201ENST00000397381 C21orf33P30042 268 aaPredicted RBP9.05□□□□□ -0.96
UCA1-201ENST00000397381 HOXC8P31273 242 aa9.05□□□□□ -0.96
UCA1-201ENST00000397381 GRK5P34947 590 aa9.05□□□□□ -0.96
UCA1-201ENST00000397381 CDKN2CP42773 168 aa9.05□□□□□ -0.96
UCA1-201ENST00000397381 PRIM2P49643 509 aa9.05□□□□□ -0.96
UCA1-201ENST00000397381 RGS6P49758 472 aa9.05□□□□□ -0.96
UCA1-201ENST00000397381 RING1Q06587 406 aa9.05□□□□□ -0.96
UCA1-201ENST00000397381 TUSC3Q13454 348 aa9.05□□□□□ -0.96
UCA1-201ENST00000397381 GPR50Q13585 617 aa9.05□□□□□ -0.96
UCA1-201ENST00000397381 SLC39A12Q504Y0 691 aa9.05□□□□□ -0.96
UCA1-201ENST00000397381 ARMCX4Q5H9R4 360 aa9.05□□□□□ -0.96
UCA1-201ENST00000397381 PTRHD1Q6GMV3 140 aaKnown RBP9.05□□□□□ -0.96
UCA1-201ENST00000397381 ERAP2Q6P179 960 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms