RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 IFT80Q9P2H3 777 aaPredicted RBP23.08■■□□□ 1.29
PABPN1-202ENST00000397276 SGTAO43765 313 aa23.07■■□□□ 1.28
PABPN1-202ENST00000397276 NOBOXO60393 691 aa23.07■■□□□ 1.28
PABPN1-202ENST00000397276 ALBP02768 609 aa23.07■■□□□ 1.28
PABPN1-202ENST00000397276 XPAP23025 273 aaPredicted RBP23.07■■□□□ 1.28
PABPN1-202ENST00000397276 MAP4P27816 1152 aaKnown RBP23.07■■□□□ 1.28
PABPN1-202ENST00000397276 SMU1Q2TAY7 513 aa23.07■■□□□ 1.28
PABPN1-202ENST00000397276 CCSMST1Q4G0I0 132 aa23.07■■□□□ 1.28
PABPN1-202ENST00000397276 EGFLAMQ63HQ2 1017 aa23.07■■□□□ 1.28
PABPN1-202ENST00000397276 OR4F3Q6IEY1 312 aa23.07■■□□□ 1.28
PABPN1-202ENST00000397276 BTLAQ7Z6A9 289 aa23.07■■□□□ 1.28
PABPN1-202ENST00000397276 SLC47A1Q96FL8 570 aa23.07■■□□□ 1.28
PABPN1-202ENST00000397276 MUS81Q96NY9 551 aa23.07■■□□□ 1.28
PABPN1-202ENST00000397276 KAT8Q9H7Z6 458 aaKnown RBP23.07■■□□□ 1.28
PABPN1-202ENST00000397276 GORASP2Q9H8Y8 452 aa23.07■■□□□ 1.28
PABPN1-202ENST00000397276 SMURF2Q9HAU4 748 aa23.07■■□□□ 1.28
PABPN1-202ENST00000397276 ITM2BQ9Y287 266 aa23.07■■□□□ 1.28
PABPN1-202ENST00000397276 ZNF106Q9H2Y7 1883 aaKnown RBP23.07■■□□□ 1.28
PABPN1-202ENST00000397276 PLXNB3Q9ULL4 1909 aa23.07■■□□□ 1.28
PABPN1-202ENST00000397276 GFYI3L273 518 aa23.07■■□□□ 1.28
PABPN1-202ENST00000397276 PBLDP30039 288 aaPredicted RBP23.07■■□□□ 1.28
PABPN1-202ENST00000397276 VIPR1P32241 457 aa23.07■■□□□ 1.28
PABPN1-202ENST00000397276 CLDN8P56748 225 aa23.07■■□□□ 1.28
PABPN1-202ENST00000397276 PFN3P60673 137 aa23.07■■□□□ 1.28
PABPN1-202ENST00000397276 GBX1Q14549 363 aa23.07■■□□□ 1.28
PABPN1-202ENST00000397276 ZDHHC20Q5W0Z9 365 aa23.07■■□□□ 1.28
PABPN1-202ENST00000397276 BRAT1Q6PJG6 821 aa23.07■■□□□ 1.28
PABPN1-202ENST00000397276 NETO1Q8TDF5 533 aa23.07■■□□□ 1.28
PABPN1-202ENST00000397276 FAM120BQ96EK7 910 aaKnown RBP23.07■■□□□ 1.28
PABPN1-202ENST00000397276 CSF3RQ99062 836 aa23.07■■□□□ 1.28
PABPN1-202ENST00000397276 UGT2B28Q9BY64 529 aa23.07■■□□□ 1.28
PABPN1-202ENST00000397276 SERHLQ9NQF3 203 aa23.07■■□□□ 1.28
PABPN1-202ENST00000397276 KLHL42Q9P2K6 505 aa23.07■■□□□ 1.28
PABPN1-202ENST00000397276 ZNF639Q9UID6 485 aa23.07■■□□□ 1.28
PABPN1-202ENST00000397276 CFAP99D6REC4 459 aa23.06■■□□□ 1.28
PABPN1-202ENST00000397276 TIMP2P16035 220 aa23.06■■□□□ 1.28
PABPN1-202ENST00000397276 HNMTP50135 292 aa23.06■■□□□ 1.28
PABPN1-202ENST00000397276 CTSCP53634 463 aa23.06■■□□□ 1.28
PABPN1-202ENST00000397276 C1QTNF12Q5T7M4 302 aa23.06■■□□□ 1.28
PABPN1-202ENST00000397276 FRG2Q64ET8 278 aa23.06■■□□□ 1.28
PABPN1-202ENST00000397276 NECAB2Q7Z6G3 386 aa23.06■■□□□ 1.28
PABPN1-202ENST00000397276 ASZ1Q8WWH4 475 aa23.06■■□□□ 1.28
PABPN1-202ENST00000397276 FRG2BQ96QU4 278 aa23.06■■□□□ 1.28
PABPN1-202ENST00000397276 U3KQV3 271 aa23.06■■□□□ 1.28
PABPN1-202ENST00000397276 PTPN2P17706 415 aa23.06■■□□□ 1.28
PABPN1-202ENST00000397276 EFNA1P20827 205 aaPredicted RBP23.06■■□□□ 1.28
PABPN1-202ENST00000397276 IRF8Q02556 426 aa23.06■■□□□ 1.28
PABPN1-202ENST00000397276 PLEKHS1Q5SXH7 462 aa23.06■■□□□ 1.28
PABPN1-202ENST00000397276 SLC35B4Q969S0 331 aa23.06■■□□□ 1.28
PABPN1-202ENST00000397276 CXXC1Q9P0U4 656 aaPredicted RBP23.06■■□□□ 1.28
PABPN1-202ENST00000397276 UNC80Q8N2C7 3258 aa23.06■■□□□ 1.28
PABPN1-202ENST00000397276 KIAA0100Q14667 2235 aaKnown RBP23.06■■□□□ 1.28
PABPN1-202ENST00000397276 TSPAN6O43657 245 aa23.06■■□□□ 1.28
PABPN1-202ENST00000397276 CYP2A6P11509 494 aaPredicted RBP23.06■■□□□ 1.28
PABPN1-202ENST00000397276 MOGQ16653 247 aa23.06■■□□□ 1.28
PABPN1-202ENST00000397276 SPRED2Q7Z698 418 aa23.06■■□□□ 1.28
PABPN1-202ENST00000397276 ZDHHC13Q8IUH4 622 aa23.06■■□□□ 1.28
PABPN1-202ENST00000397276 MICU2Q8IYU8 434 aa23.06■■□□□ 1.28
PABPN1-202ENST00000397276 TCAIMQ8N3R3 496 aa23.06■■□□□ 1.28
PABPN1-202ENST00000397276 FRS2Q8WU20 508 aa23.06■■□□□ 1.28
PABPN1-202ENST00000397276 SH3GL1Q99961 368 aa23.06■■□□□ 1.28
PABPN1-202ENST00000397276 CD320Q9NPF0 282 aa23.06■■□□□ 1.28
PABPN1-202ENST00000397276 ASIC5Q9NY37 505 aa23.06■■□□□ 1.28
PABPN1-202ENST00000397276 G3V2T6 193 aa23.05■■□□□ 1.28
PABPN1-202ENST00000397276 H0Y858 1186 aa23.05■■□□□ 1.28
PABPN1-202ENST00000397276 SERPINA1P01009 418 aa23.05■■□□□ 1.28
PABPN1-202ENST00000397276 ZNF12P17014 697 aa23.05■■□□□ 1.28
PABPN1-202ENST00000397276 NNMTP40261 264 aa23.05■■□□□ 1.28
PABPN1-202ENST00000397276 SLC14A1Q13336 389 aa23.05■■□□□ 1.28
PABPN1-202ENST00000397276 GRIN2CQ14957 1233 aa23.05■■□□□ 1.28
PABPN1-202ENST00000397276 PON2Q15165 354 aa23.05■■□□□ 1.28
PABPN1-202ENST00000397276 XKR6Q5GH73 641 aa23.05■■□□□ 1.28
PABPN1-202ENST00000397276 RNF165Q6ZSG1 346 aa23.05■■□□□ 1.28
PABPN1-202ENST00000397276 CCDC115Q96NT0 180 aa23.05■■□□□ 1.28
PABPN1-202ENST00000397276 CREG1O75629 220 aa23.05■■□□□ 1.28
PABPN1-202ENST00000397276 MPC1LP0DKB6 136 aa23.05■■□□□ 1.28
PABPN1-202ENST00000397276 CCNA2P20248 432 aa23.05■■□□□ 1.28
PABPN1-202ENST00000397276 CD22P20273 847 aa23.05■■□□□ 1.28
PABPN1-202ENST00000397276 PRKACGP22612 351 aa23.05■■□□□ 1.28
PABPN1-202ENST00000397276 ADARB1P78563 741 aaKnown RBP23.05■■□□□ 1.28
PABPN1-202ENST00000397276 SYTL3Q4VX76 610 aa23.05■■□□□ 1.28
PABPN1-202ENST00000397276 ARHGAP15Q53QZ3 475 aa23.05■■□□□ 1.28
PABPN1-202ENST00000397276 EEF1AKMT2Q5JPI9 291 aaKnown RBP23.05■■□□□ 1.28
PABPN1-202ENST00000397276 ADNP2Q6IQ32 1131 aa23.05■■□□□ 1.28
PABPN1-202ENST00000397276 RAVER1Q8IY67 606 aaKnown RBP23.05■■□□□ 1.28
PABPN1-202ENST00000397276 AADATQ8N5Z0 425 aa23.05■■□□□ 1.28
PABPN1-202ENST00000397276 L3MBTL4Q8NA19 623 aa23.05■■□□□ 1.28
PABPN1-202ENST00000397276 OR7A2PQ8NGA2 310 aa23.05■■□□□ 1.28
PABPN1-202ENST00000397276 SNX19Q92543 992 aa23.05■■□□□ 1.28
PABPN1-202ENST00000397276 WRAP53Q9BUR4 548 aaKnown RBP23.05■■□□□ 1.28
PABPN1-202ENST00000397276 SULT1C4O75897 302 aa23.04■■□□□ 1.28
PABPN1-202ENST00000397276 C7P10643 843 aa23.04■■□□□ 1.28
PABPN1-202ENST00000397276 ALDH3A2P51648 485 aa23.04■■□□□ 1.28
PABPN1-202ENST00000397276 NAE1Q13564 534 aa23.04■■□□□ 1.28
PABPN1-202ENST00000397276 DAG1Q14118 895 aa23.04■■□□□ 1.28
PABPN1-202ENST00000397276 CDKL4Q5MAI5 379 aa23.04■■□□□ 1.28
PABPN1-202ENST00000397276 NOXRED1Q6NXP6 359 aa23.04■■□□□ 1.28
PABPN1-202ENST00000397276 DOK6Q6PKX4 331 aa23.04■■□□□ 1.28
PABPN1-202ENST00000397276 GRASPQ7Z6J2 395 aaPredicted RBP23.04■■□□□ 1.28
PABPN1-202ENST00000397276 SNX29P2Q8IUI4 249 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms