RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 CNTN3Q9P232 1028 aa17.04■□□□□ 0.32
MCF2L-208ENST00000397030 FAM149AA5PLN7 773 aa17.03■□□□□ 0.32
MCF2L-208ENST00000397030 SLC30A4O14863 429 aa17.03■□□□□ 0.32
MCF2L-208ENST00000397030 HTR7P34969 479 aa17.03■□□□□ 0.32
MCF2L-208ENST00000397030 TRPV5Q9NQA5 729 aa17.03■□□□□ 0.32
MCF2L-208ENST00000397030 CFL2Q9Y281 166 aa17.03■□□□□ 0.32
MCF2L-208ENST00000397030 MTHFD1P11586 935 aaKnown RBP17.03■□□□□ 0.32
MCF2L-208ENST00000397030 RPS15P62841 145 aaKnown RBP17.03■□□□□ 0.32
MCF2L-208ENST00000397030 FAM182AQ5T1J6 154 aa17.03■□□□□ 0.32
MCF2L-208ENST00000397030 LRRC66Q68CR7 880 aa17.03■□□□□ 0.32
MCF2L-208ENST00000397030 PDE12Q6L8Q7 609 aaKnown RBP17.03■□□□□ 0.32
MCF2L-208ENST00000397030 USP32Q8NFA0 1604 aa17.03■□□□□ 0.32
MCF2L-208ENST00000397030 DNM1LO00429 736 aa17.03■□□□□ 0.32
MCF2L-208ENST00000397030 NIPSNAP2O75323 286 aa17.03■□□□□ 0.32
MCF2L-208ENST00000397030 JUNDP17535 347 aa17.03■□□□□ 0.32
MCF2L-208ENST00000397030 GRK5P34947 590 aa17.03■□□□□ 0.32
MCF2L-208ENST00000397030 PLP2Q04941 152 aa17.03■□□□□ 0.32
MCF2L-208ENST00000397030 SLC10A6Q3KNW5 377 aa17.03■□□□□ 0.32
MCF2L-208ENST00000397030 RAET1LQ5VY80 246 aa17.03■□□□□ 0.32
MCF2L-208ENST00000397030 THOC7Q6I9Y2 204 aaKnown RBP17.03■□□□□ 0.32
MCF2L-208ENST00000397030 GLOD5A6NK44 160 aa17.03■□□□□ 0.32
MCF2L-208ENST00000397030 SLC1A2P43004 574 aa17.03■□□□□ 0.32
MCF2L-208ENST00000397030 PRPF38BQ5VTL8 546 aaKnown RBP17.03■□□□□ 0.32
MCF2L-208ENST00000397030 SFRP1Q8N474 314 aa17.03■□□□□ 0.32
MCF2L-208ENST00000397030 ZNF565Q8N9K5 539 aa17.03■□□□□ 0.32
MCF2L-208ENST00000397030 PDPRQ8NCN5 879 aa17.03■□□□□ 0.32
MCF2L-208ENST00000397030 RHBDD1Q8TEB9 315 aa17.03■□□□□ 0.32
MCF2L-208ENST00000397030 CLEC4DQ8WXI8 215 aa17.03■□□□□ 0.32
MCF2L-208ENST00000397030 OR6C74A6NCV1 312 aa17.03■□□□□ 0.32
MCF2L-208ENST00000397030 SEC14L5O43304 696 aa17.03■□□□□ 0.32
MCF2L-208ENST00000397030 ESR1P03372 595 aa17.03■□□□□ 0.32
MCF2L-208ENST00000397030 BCHEP06276 602 aa17.03■□□□□ 0.32
MCF2L-208ENST00000397030 S100A9P06702 114 aaKnown RBP17.03■□□□□ 0.32
MCF2L-208ENST00000397030 PRKCIP41743 596 aa17.03■□□□□ 0.32
MCF2L-208ENST00000397030 LCP2Q13094 533 aa17.03■□□□□ 0.32
MCF2L-208ENST00000397030 ZNF267Q14586 743 aaPredicted RBP17.03■□□□□ 0.32
MCF2L-208ENST00000397030 USP30Q70CQ3 517 aa17.03■□□□□ 0.32
MCF2L-208ENST00000397030 NXPE2Q96DL1 559 aa17.03■□□□□ 0.32
MCF2L-208ENST00000397030 TTTY10Q9BZA0 68 aa17.03■□□□□ 0.32
MCF2L-208ENST00000397030 RNF39Q9H2S5 420 aa17.03■□□□□ 0.32
MCF2L-208ENST00000397030 SFXN1Q9H9B4 322 aa17.03■□□□□ 0.32
MCF2L-208ENST00000397030 AP4B1Q9Y6B7 739 aa17.03■□□□□ 0.32
MCF2L-208ENST00000397030 hCG_1807616A0A1W2PRN6 198 aa17.02■□□□□ 0.32
MCF2L-208ENST00000397030 PRR5-ARHGAP8B1AHC4 643 aa17.02■□□□□ 0.32
MCF2L-208ENST00000397030 PITPNM1O00562 1244 aa17.02■□□□□ 0.32
MCF2L-208ENST00000397030 SOX1O00570 391 aaPredicted RBP17.02■□□□□ 0.32
MCF2L-208ENST00000397030 IRAK2O43187 625 aa17.02■□□□□ 0.32
MCF2L-208ENST00000397030 TPSB2P20231 275 aa17.02■□□□□ 0.32
MCF2L-208ENST00000397030 ARPC4P59998 168 aa17.02■□□□□ 0.32
MCF2L-208ENST00000397030 ARHGAP8P85298 464 aa17.02■□□□□ 0.32
MCF2L-208ENST00000397030 TPSAB1Q15661 275 aa17.02■□□□□ 0.32
MCF2L-208ENST00000397030 LRRC55Q6ZSA7 311 aa17.02■□□□□ 0.32
MCF2L-208ENST00000397030 ZNF514Q96K75 400 aaPredicted RBP17.02■□□□□ 0.32
MCF2L-208ENST00000397030 CMKLR1Q99788 373 aa17.02■□□□□ 0.32
MCF2L-208ENST00000397030 XKR8Q9H6D3 395 aa17.02■□□□□ 0.32
MCF2L-208ENST00000397030 LMTK2Q8IWU2 1503 aa17.02■□□□□ 0.32
MCF2L-208ENST00000397030 MAP2P11137 1827 aaKnown RBP17.02■□□□□ 0.32
MCF2L-208ENST00000397030 A6NLC8 198 aa17.02■□□□□ 0.32
MCF2L-208ENST00000397030 BPGMP07738 259 aa17.02■□□□□ 0.32
MCF2L-208ENST00000397030 AP2S1P53680 142 aaPredicted RBP17.02■□□□□ 0.32
MCF2L-208ENST00000397030 GALK2Q01415 458 aa17.02■□□□□ 0.32
MCF2L-208ENST00000397030 FOLH1Q04609 750 aa17.02■□□□□ 0.32
MCF2L-208ENST00000397030 FAM174BQ3ZCQ3 159 aa17.02■□□□□ 0.32
MCF2L-208ENST00000397030 SCGB2B2Q4G0G5 96 aa17.02■□□□□ 0.32
MCF2L-208ENST00000397030 TTC27Q6P3X3 843 aa17.02■□□□□ 0.32
MCF2L-208ENST00000397030 RAB11FIP2Q7L804 512 aa17.02■□□□□ 0.32
MCF2L-208ENST00000397030 ZNF548Q8NEK5 533 aaPredicted RBP17.02■□□□□ 0.32
MCF2L-208ENST00000397030 DZANK1Q9NVP4 752 aa17.02■□□□□ 0.32
MCF2L-208ENST00000397030 RCOR3Q9P2K3 495 aaPredicted RBP17.02■□□□□ 0.32
MCF2L-208ENST00000397030 REREQ9P2R6 1566 aa17.02■□□□□ 0.31
MCF2L-208ENST00000397030 NOBOXO60393 691 aa17.02■□□□□ 0.31
MCF2L-208ENST00000397030 PGRP06401 933 aa17.02■□□□□ 0.31
MCF2L-208ENST00000397030 RHOP08100 348 aa17.02■□□□□ 0.31
MCF2L-208ENST00000397030 MTPNP58546 118 aa17.02■□□□□ 0.31
MCF2L-208ENST00000397030 MRPL49Q13405 166 aaKnown RBP17.02■□□□□ 0.31
MCF2L-208ENST00000397030 TTMPQ5BVD1 217 aa17.02■□□□□ 0.31
MCF2L-208ENST00000397030 TMEM225Q6GV28 225 aa17.02■□□□□ 0.31
MCF2L-208ENST00000397030 FAM92BQ6ZTR7 304 aa17.02■□□□□ 0.31
MCF2L-208ENST00000397030 SLCO6A1Q86UG4 719 aa17.02■□□□□ 0.31
MCF2L-208ENST00000397030 ZNF285Q96NJ3 590 aa17.02■□□□□ 0.31
MCF2L-208ENST00000397030 EPYCQ99645 322 aa17.02■□□□□ 0.31
MCF2L-208ENST00000397030 C1orf109Q9NX04 203 aa17.02■□□□□ 0.31
MCF2L-208ENST00000397030 PADI2Q9Y2J8 665 aa17.02■□□□□ 0.31
MCF2L-208ENST00000397030 DYTNA2CJ06 578 aa17.02■□□□□ 0.31
MCF2L-208ENST00000397030 C11orf98E9PRG8 122 aa17.02■□□□□ 0.31
MCF2L-208ENST00000397030 TSHRP16473 764 aa17.02■□□□□ 0.31
MCF2L-208ENST00000397030 IFI44LQ53G44 452 aa17.02■□□□□ 0.31
MCF2L-208ENST00000397030 ZC3H14Q6PJT7 736 aaKnown RBP17.02■□□□□ 0.31
MCF2L-208ENST00000397030 HAPLN3Q96S86 360 aa17.02■□□□□ 0.31
MCF2L-208ENST00000397030 MNTQ99583 582 aa17.02■□□□□ 0.31
MCF2L-208ENST00000397030 ACSS3Q9H6R3 686 aa17.02■□□□□ 0.31
MCF2L-208ENST00000397030 HMGXB4Q9UGU5 601 aa17.02■□□□□ 0.31
MCF2L-208ENST00000397030 DUX1O43812 170 aa17.01■□□□□ 0.31
MCF2L-208ENST00000397030 ERCC1P07992 297 aaPredicted RBP17.01■□□□□ 0.31
MCF2L-208ENST00000397030 JAGN1Q8N5M9 183 aa17.01■□□□□ 0.31
MCF2L-208ENST00000397030 METTL8Q9H825 291 aaKnown RBP17.01■□□□□ 0.31
MCF2L-208ENST00000397030 MRM3Q9HC36 420 aaKnown RBP17.01■□□□□ 0.31
MCF2L-208ENST00000397030 ZNF282Q9UDV7 671 aaPredicted RBP17.01■□□□□ 0.31
MCF2L-208ENST00000397030 MAN2A2P49641 1150 aa17.01■□□□□ 0.31
MCF2L-208ENST00000397030 CLCN4P51793 760 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms