RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 TACR2P21452 398 aa23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 GNG2P59768 71 aa23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 FOXD4Q12950 439 aaPredicted RBP23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 PROX2Q3B8N5 592 aa23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 ST6GAL2Q96JF0 529 aa23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 PLSCR3Q9NRY6 295 aa23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 ELOVL2Q9NXB9 296 aa23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 ZFP37Q9Y6Q3 630 aaPredicted RBP23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 UPK3BL1B0FP48 263 aa23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 UPK3BL2E5RIL1 263 aa23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 CA5AP35218 305 aa23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 FAM110CQ1W6H9 321 aa23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 BCL7AQ4VC05 210 aa23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 SPANXN2Q5MJ10 180 aa23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 SNX20Q7Z614 316 aa23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 DNASE1L2Q92874 299 aa23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 FAM120BQ96EK7 910 aaKnown RBP23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 COPS4Q9BT78 406 aa23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 PDP1Q9P0J1 537 aaPredicted RBP23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 RAPGEFL1Q9UHV5 662 aa23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 PEX16Q9Y5Y5 336 aa23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 PIKFYVEQ9Y2I7 2098 aa23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 CCRL2O00421 344 aa23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 SGSHP51688 502 aa23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 MAP2K5Q13163 448 aa23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 KIAA1614Q5VZ46 1190 aa23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 OR2T5Q6IEZ7 315 aa23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 SIMC1Q8NDZ2 872 aa23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 OR2T29Q8NH02 315 aa23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 LKAAEAR1Q8TD35 194 aa23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 FCGR1BQ92637 280 aa23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 INPP5KQ9BT40 448 aa23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 CRISPLD1Q9H336 500 aa23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 UBA2Q9UBT2 640 aaPredicted RBP23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 GPSM3Q9Y4H4 160 aa23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 RAI2Q9Y5P3 530 aa23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 MAU2Q9Y6X3 613 aa23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 SNX4O95219 450 aa23.34■■□□□ 1.33
CSNK1E-203ENST00000396832 RPLP0P05388 317 aaKnown RBP23.34■■□□□ 1.33
CSNK1E-203ENST00000396832 LPOP22079 712 aaPredicted RBP23.34■■□□□ 1.33
CSNK1E-203ENST00000396832 TAF1AQ15573 450 aaPredicted RBP23.34■■□□□ 1.33
CSNK1E-203ENST00000396832 FAM151BQ6UXP7 276 aa23.34■■□□□ 1.33
CSNK1E-203ENST00000396832 Q96MT0 163 aa23.34■■□□□ 1.33
CSNK1E-203ENST00000396832 TTYH2Q9BSA4 534 aa23.34■■□□□ 1.33
CSNK1E-203ENST00000396832 C1orf109Q9NX04 203 aa23.34■■□□□ 1.33
CSNK1E-203ENST00000396832 PAQR5Q9NXK6 330 aaPredicted RBP23.34■■□□□ 1.33
CSNK1E-203ENST00000396832 F5H5T6 163 aa23.34■■□□□ 1.33
CSNK1E-203ENST00000396832 INSIG1O15503 277 aa23.34■■□□□ 1.33
CSNK1E-203ENST00000396832 FFAR2O15552 330 aa23.34■■□□□ 1.33
CSNK1E-203ENST00000396832 SEMG2Q02383 582 aa23.34■■□□□ 1.33
CSNK1E-203ENST00000396832 APH1BQ8WW43 257 aa23.34■■□□□ 1.33
CSNK1E-203ENST00000396832 SDHCQ99643 169 aaPredicted RBP23.34■■□□□ 1.33
CSNK1E-203ENST00000396832 OR51E2Q9H255 320 aa23.34■■□□□ 1.33
CSNK1E-203ENST00000396832 ERVK13-1Q9NX77 482 aa23.34■■□□□ 1.33
CSNK1E-203ENST00000396832 CCDC59Q9P031 241 aaKnown RBP23.34■■□□□ 1.33
CSNK1E-203ENST00000396832 KRT87PA6NCN2 255 aa23.33■■□□□ 1.33
CSNK1E-203ENST00000396832 SEMA3DO95025 777 aa23.33■■□□□ 1.33
CSNK1E-203ENST00000396832 ALPIP09923 528 aa23.33■■□□□ 1.33
CSNK1E-203ENST00000396832 IL1RNP18510 177 aa23.33■■□□□ 1.33
CSNK1E-203ENST00000396832 MAGEA2P43356 314 aa23.33■■□□□ 1.33
CSNK1E-203ENST00000396832 RPP38P78345 283 aaKnown RBP23.33■■□□□ 1.33
CSNK1E-203ENST00000396832 GALK2Q01415 458 aa23.33■■□□□ 1.33
CSNK1E-203ENST00000396832 SLC14A1Q13336 389 aa23.33■■□□□ 1.33
CSNK1E-203ENST00000396832 SBSNQ6UWP8 590 aa23.33■■□□□ 1.33
CSNK1E-203ENST00000396832 NRARPQ7Z6K4 114 aa23.33■■□□□ 1.33
CSNK1E-203ENST00000396832 PAF1Q8N7H5 531 aa23.33■■□□□ 1.33
CSNK1E-203ENST00000396832 KBTBD8Q8NFY9 601 aa23.33■■□□□ 1.33
CSNK1E-203ENST00000396832 CIPCQ9C0C6 399 aa23.33■■□□□ 1.33
CSNK1E-203ENST00000396832 FBXO44Q9H4M3 255 aa23.33■■□□□ 1.33
CSNK1E-203ENST00000396832 PNMA8CA0A1B0GUJ8 204 aa23.33■■□□□ 1.32
CSNK1E-203ENST00000396832 PER2O15055 1255 aa23.33■■□□□ 1.32
CSNK1E-203ENST00000396832 SLC15A1P46059 708 aa23.33■■□□□ 1.32
CSNK1E-203ENST00000396832 LRRC26Q2I0M4 334 aa23.33■■□□□ 1.32
CSNK1E-203ENST00000396832 SLC46A3Q7Z3Q1 461 aa23.33■■□□□ 1.32
CSNK1E-203ENST00000396832 ZFYVE19Q96K21 471 aa23.33■■□□□ 1.32
CSNK1E-203ENST00000396832 TSSK3Q96PN8 268 aa23.33■■□□□ 1.32
CSNK1E-203ENST00000396832 MGME1Q9BQP7 344 aa23.33■■□□□ 1.32
CSNK1E-203ENST00000396832 KRT84Q9NSB2 600 aa23.33■■□□□ 1.32
CSNK1E-203ENST00000396832 TAS2R9Q9NYW1 312 aa23.33■■□□□ 1.32
CSNK1E-203ENST00000396832 KIF17Q9P2E2 1029 aa23.33■■□□□ 1.32
CSNK1E-203ENST00000396832 ZNF490Q9ULM2 529 aaPredicted RBP23.33■■□□□ 1.32
CSNK1E-203ENST00000396832 BTBD3Q9Y2F9 522 aa23.33■■□□□ 1.32
CSNK1E-203ENST00000396832 FAM220BPB1ANY3 271 aa23.32■■□□□ 1.32
CSNK1E-203ENST00000396832 CDKN2CP42773 168 aa23.32■■□□□ 1.32
CSNK1E-203ENST00000396832 TTPAP49638 278 aa23.32■■□□□ 1.32
CSNK1E-203ENST00000396832 CPSF6Q16630 551 aaKnown RBP eCLIP23.32■■□□□ 1.32
CSNK1E-203ENST00000396832 ATG9BQ674R7 924 aa23.32■■□□□ 1.32
CSNK1E-203ENST00000396832 PRR23CQ6ZRP0 262 aa23.32■■□□□ 1.32
CSNK1E-203ENST00000396832 NEDD4LQ96PU5 975 aa23.32■■□□□ 1.32
CSNK1E-203ENST00000396832 PARK7Q99497 189 aaKnown RBP23.32■■□□□ 1.32
CSNK1E-203ENST00000396832 FNIP2Q9P278 1114 aa23.32■■□□□ 1.32
CSNK1E-203ENST00000396832 AFF4Q9UHB7 1163 aaKnown RBP23.32■■□□□ 1.32
CSNK1E-203ENST00000396832 CLCN7P51798 805 aa23.32■■□□□ 1.32
CSNK1E-203ENST00000396832 SIGIRRQ6IA17 410 aa23.32■■□□□ 1.32
CSNK1E-203ENST00000396832 P3H2Q8IVL5 708 aa23.32■■□□□ 1.32
CSNK1E-203ENST00000396832 ENTHD1Q8IYW4 607 aa23.32■■□□□ 1.32
CSNK1E-203ENST00000396832 ATG16L2Q8NAA4 619 aa23.32■■□□□ 1.32
CSNK1E-203ENST00000396832 CENPOQ9BU64 300 aa23.32■■□□□ 1.32
CSNK1E-203ENST00000396832 AMBNQ9NP70 447 aa23.32■■□□□ 1.32
CSNK1E-203ENST00000396832 WWOXQ9NZC7 414 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms