RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 CCDC88CQ9P219 2028 aa16.7■□□□□ 0.26
EXOSC3-202ENST00000396521 DOCK10Q96BY6 2186 aa16.7■□□□□ 0.26
EXOSC3-202ENST00000396521 OR51F1A6NGY5 319 aa16.69■□□□□ 0.26
EXOSC3-202ENST00000396521 CTSVO60911 334 aa16.69■□□□□ 0.26
EXOSC3-202ENST00000396521 WFS1O76024 890 aa16.69■□□□□ 0.26
EXOSC3-202ENST00000396521 SUN1O94901 812 aa16.69■□□□□ 0.26
EXOSC3-202ENST00000396521 GOT2P00505 430 aaKnown RBP16.69■□□□□ 0.26
EXOSC3-202ENST00000396521 AGAP20933 346 aa16.69■□□□□ 0.26
EXOSC3-202ENST00000396521 FBLP22087 321 aaKnown RBP16.69■□□□□ 0.26
EXOSC3-202ENST00000396521 EMP2P54851 167 aa16.69■□□□□ 0.26
EXOSC3-202ENST00000396521 NAP1L1P55209 391 aaKnown RBP16.69■□□□□ 0.26
EXOSC3-202ENST00000396521 DSG2Q14126 1118 aa16.69■□□□□ 0.26
EXOSC3-202ENST00000396521 VWA2Q5GFL6 755 aa16.69■□□□□ 0.26
EXOSC3-202ENST00000396521 TSTD2Q5T7W7 516 aa16.69■□□□□ 0.26
EXOSC3-202ENST00000396521 CNSTQ6PJW8 725 aa16.69■□□□□ 0.26
EXOSC3-202ENST00000396521 RNF44Q7L0R7 432 aa16.69■□□□□ 0.26
EXOSC3-202ENST00000396521 LRRC6Q86X45 466 aa16.69■□□□□ 0.26
EXOSC3-202ENST00000396521 VRK3Q8IV63 474 aa16.69■□□□□ 0.26
EXOSC3-202ENST00000396521 C2orf73Q8N5S3 287 aaPredicted RBP16.69■□□□□ 0.26
EXOSC3-202ENST00000396521 UBL4BQ8N7F7 174 aa16.69■□□□□ 0.26
EXOSC3-202ENST00000396521 OR2L3Q8NG85 312 aa16.69■□□□□ 0.26
EXOSC3-202ENST00000396521 IL17FQ96PD4 163 aa16.69■□□□□ 0.26
EXOSC3-202ENST00000396521 TAAR6Q96RI8 345 aa16.69■□□□□ 0.26
EXOSC3-202ENST00000396521 TGIF2Q9GZN2 237 aa16.69■□□□□ 0.26
EXOSC3-202ENST00000396521 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.69■□□□□ 0.26
EXOSC3-202ENST00000396521 PTGFRNQ9P2B2 879 aa16.69■□□□□ 0.26
EXOSC3-202ENST00000396521 CROCCQ5TZA2 2017 aa16.69■□□□□ 0.26
EXOSC3-202ENST00000396521 MIF4GDA9UHW6 222 aaKnown RBP16.68■□□□□ 0.26
EXOSC3-202ENST00000396521 TXNDC9O14530 226 aa16.68■□□□□ 0.26
EXOSC3-202ENST00000396521 VPS26AO75436 327 aa16.68■□□□□ 0.26
EXOSC3-202ENST00000396521 RASAL1O95294 804 aa16.68■□□□□ 0.26
EXOSC3-202ENST00000396521 MLYCDO95822 493 aa16.68■□□□□ 0.26
EXOSC3-202ENST00000396521 UQCRHP07919 91 aa16.68■□□□□ 0.26
EXOSC3-202ENST00000396521 COX6A1P12074 109 aa16.68■□□□□ 0.26
EXOSC3-202ENST00000396521 FDFT1P37268 417 aa16.68■□□□□ 0.26
EXOSC3-202ENST00000396521 CA7P43166 264 aa16.68■□□□□ 0.26
EXOSC3-202ENST00000396521 KCNK10P57789 538 aa16.68■□□□□ 0.26
EXOSC3-202ENST00000396521 LONRF1Q17RB8 773 aa16.68■□□□□ 0.26
EXOSC3-202ENST00000396521 CCDC38Q502W7 563 aa16.68■□□□□ 0.26
EXOSC3-202ENST00000396521 GARNL3Q5VVW2 1013 aa16.68■□□□□ 0.26
EXOSC3-202ENST00000396521 MRGPRGQ86SM5 289 aa16.68■□□□□ 0.26
EXOSC3-202ENST00000396521 TAX1BP1Q86VP1 789 aa16.68■□□□□ 0.26
EXOSC3-202ENST00000396521 MPP5Q8N3R9 675 aa16.68■□□□□ 0.26
EXOSC3-202ENST00000396521 OR52K1Q8NGK4 314 aa16.68■□□□□ 0.26
EXOSC3-202ENST00000396521 SLC35B2Q8TB61 432 aa16.68■□□□□ 0.26
EXOSC3-202ENST00000396521 BRIX1Q8TDN6 353 aaKnown RBP16.68■□□□□ 0.26
EXOSC3-202ENST00000396521 ALG3Q92685 438 aa16.68■□□□□ 0.26
EXOSC3-202ENST00000396521 ZFYVE21Q9BQ24 234 aa16.68■□□□□ 0.26
EXOSC3-202ENST00000396521 MKKSQ9NPJ1 570 aaPredicted RBP16.68■□□□□ 0.26
EXOSC3-202ENST00000396521 SEC14L3Q9UDX4 400 aa16.68■□□□□ 0.26
EXOSC3-202ENST00000396521 NUP210LQ5VU65 1888 aa16.67■□□□□ 0.26
EXOSC3-202ENST00000396521 IGHV1-45A0A0A0MS14 117 aa16.67■□□□□ 0.26
EXOSC3-202ENST00000396521 TRGV8A0A0C4DH27 118 aa16.67■□□□□ 0.26
EXOSC3-202ENST00000396521 OR2A25A4D2G3 310 aa16.67■□□□□ 0.26
EXOSC3-202ENST00000396521 IDSB3KWA1 339 aa16.67■□□□□ 0.26
EXOSC3-202ENST00000396521 CCL21O00585 134 aa16.67■□□□□ 0.26
EXOSC3-202ENST00000396521 C1orf105O95561 183 aa16.67■□□□□ 0.26
EXOSC3-202ENST00000396521 CYC1P08574 325 aa16.67■□□□□ 0.26
EXOSC3-202ENST00000396521 PKMP14618 531 aaKnown RBP16.67■□□□□ 0.26
EXOSC3-202ENST00000396521 COX6B1P14854 86 aa16.67■□□□□ 0.26
EXOSC3-202ENST00000396521 HTR1EP28566 365 aa16.67■□□□□ 0.26
EXOSC3-202ENST00000396521 CMPK1P30085 196 aa16.67■□□□□ 0.26
EXOSC3-202ENST00000396521 RELAQ04206 551 aa16.67■□□□□ 0.26
EXOSC3-202ENST00000396521 PRTGQ2VWP7 1150 aa16.67■□□□□ 0.26
EXOSC3-202ENST00000396521 ABHD17BQ5VST6 288 aa16.67■□□□□ 0.26
EXOSC3-202ENST00000396521 PTRHD1Q6GMV3 140 aaKnown RBP16.67■□□□□ 0.26
EXOSC3-202ENST00000396521 PPP1R21Q6ZMI0 780 aa16.67■□□□□ 0.26
EXOSC3-202ENST00000396521 OTOAQ7RTW8 1153 aa16.67■□□□□ 0.26
EXOSC3-202ENST00000396521 METTL27Q8N6F8 245 aaPredicted RBP16.67■□□□□ 0.26
EXOSC3-202ENST00000396521 TC2NQ8N9U0 490 aa16.67■□□□□ 0.26
EXOSC3-202ENST00000396521 OR2A1Q8NGT9 310 aa16.67■□□□□ 0.26
EXOSC3-202ENST00000396521 FRMD8P1Q9BZ68 369 aaPredicted RBP16.67■□□□□ 0.26
EXOSC3-202ENST00000396521 PIH1D1Q9NWS0 290 aaKnown RBP16.67■□□□□ 0.26
EXOSC3-202ENST00000396521 SPATA7Q9P0W8 599 aa16.67■□□□□ 0.26
EXOSC3-202ENST00000396521 TRPC4Q9UBN4 977 aa16.67■□□□□ 0.26
EXOSC3-202ENST00000396521 GNPTGQ9UJJ9 305 aa16.67■□□□□ 0.26
EXOSC3-202ENST00000396521 TTC7AQ9ULT0 858 aaPredicted RBP16.67■□□□□ 0.26
EXOSC3-202ENST00000396521 PCDHGB6Q9Y5F9 930 aa16.67■□□□□ 0.26
EXOSC3-202ENST00000396521 EPN1Q9Y6I3 576 aaPredicted RBP16.67■□□□□ 0.26
EXOSC3-202ENST00000396521 F8P00451 2351 aa16.67■□□□□ 0.26
EXOSC3-202ENST00000396521 LOC102723996A0A087X1L8 192 aa16.66■□□□□ 0.26
EXOSC3-202ENST00000396521 A0A0J9YVX5 310 aa16.66■□□□□ 0.26
EXOSC3-202ENST00000396521 E7EVH7 732 aa16.66■□□□□ 0.26
EXOSC3-202ENST00000396521 UNC5CO95185 931 aa16.66■□□□□ 0.26
EXOSC3-202ENST00000396521 EIF2S1P05198 315 aaKnown RBP16.66■□□□□ 0.26
EXOSC3-202ENST00000396521 HEXBP07686 556 aa16.66■□□□□ 0.26
EXOSC3-202ENST00000396521 HSD17B2P37059 387 aa16.66■□□□□ 0.26
EXOSC3-202ENST00000396521 SMSP52788 366 aa16.66■□□□□ 0.26
EXOSC3-202ENST00000396521 KLF1Q13351 362 aaPredicted RBP16.66■□□□□ 0.26
EXOSC3-202ENST00000396521 FRMPD2BQ6IN97 320 aa16.66■□□□□ 0.26
EXOSC3-202ENST00000396521 ZNF534Q76KX8 674 aa16.66■□□□□ 0.26
EXOSC3-202ENST00000396521 SYCE1Q8N0S2 351 aa16.66■□□□□ 0.26
EXOSC3-202ENST00000396521 SKA2Q8WVK7 121 aaPredicted RBP16.66■□□□□ 0.26
EXOSC3-202ENST00000396521 C8orf44Q96CB5 159 aa16.66■□□□□ 0.26
EXOSC3-202ENST00000396521 CCDC120Q96HB5 630 aa16.66■□□□□ 0.26
EXOSC3-202ENST00000396521 CABS1Q96KC9 395 aa16.66■□□□□ 0.26
EXOSC3-202ENST00000396521 LURAP1Q96LR2 239 aa16.66■□□□□ 0.26
EXOSC3-202ENST00000396521 MIPEPQ99797 713 aa16.66■□□□□ 0.26
EXOSC3-202ENST00000396521 TMEM121Q9BTD3 319 aa16.66■□□□□ 0.26
EXOSC3-202ENST00000396521 ZNF700Q9H0M5 742 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms