RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 CBX2Q14781 532 aaPredicted RBP16.29■□□□□ 0.2
NUP50-202ENST00000396096 NKG7Q16617 165 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 BCL7AQ4VC05 210 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 XKR6Q5GH73 641 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 NAIF1Q69YI7 327 aaPredicted RBP16.29■□□□□ 0.2
NUP50-202ENST00000396096 ABRAXAS1Q6UWZ7 409 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 GPR180Q86V85 440 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 C12orf40Q86WS4 652 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 FAM86B1Q8N7N1 296 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 FAM162AQ96A26 154 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 FAM120BQ96EK7 910 aaKnown RBP16.29■□□□□ 0.2
NUP50-202ENST00000396096 C11orf24Q96F05 449 aaPredicted RBP16.29■□□□□ 0.2
NUP50-202ENST00000396096 SLC47A1Q96FL8 570 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 REXO5Q96IC2 774 aaKnown RBP16.29■□□□□ 0.2
NUP50-202ENST00000396096 RDH12Q96NR8 316 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 INPP5KQ9BT40 448 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 BRF2Q9HAW0 419 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 LIMD1Q9UGP4 676 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 DPP7Q9UHL4 492 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 CREG1O75629 220 aa16.28■□□□□ 0.2
NUP50-202ENST00000396096 SNAP29O95721 258 aa16.28■□□□□ 0.2
NUP50-202ENST00000396096 PRNPP04156 253 aa16.28■□□□□ 0.2
NUP50-202ENST00000396096 ALPLP05186 524 aa16.28■□□□□ 0.2
NUP50-202ENST00000396096 MTHFRP42898 656 aa16.28■□□□□ 0.2
NUP50-202ENST00000396096 SRSF11Q05519 484 aaKnown RBP16.28■□□□□ 0.2
NUP50-202ENST00000396096 DOC2AQ14183 400 aa16.28■□□□□ 0.2
NUP50-202ENST00000396096 GRIN2CQ14957 1233 aa16.28■□□□□ 0.2
NUP50-202ENST00000396096 PON2Q15165 354 aa16.28■□□□□ 0.2
NUP50-202ENST00000396096 TCEAL5Q5H9L2 206 aa16.28■□□□□ 0.2
NUP50-202ENST00000396096 TMEM214Q6NUQ4 689 aaKnown RBP16.28■□□□□ 0.2
NUP50-202ENST00000396096 GCNT7Q6ZNI0 430 aa16.28■□□□□ 0.2
NUP50-202ENST00000396096 ZNF765Q7L2R6 523 aa16.28■□□□□ 0.2
NUP50-202ENST00000396096 ETFBKMTQ8IXQ9 262 aa16.28■□□□□ 0.2
NUP50-202ENST00000396096 PHACTR4Q8IZ21 702 aa16.28■□□□□ 0.2
NUP50-202ENST00000396096 ZNF786Q8N393 782 aa16.28■□□□□ 0.2
NUP50-202ENST00000396096 TMIEQ8NEW7 156 aa16.28■□□□□ 0.2
NUP50-202ENST00000396096 FBXO30Q8TB52 745 aa16.28■□□□□ 0.2
NUP50-202ENST00000396096 HERVK_113Q902F9 699 aa16.28■□□□□ 0.2
NUP50-202ENST00000396096 NELL1Q92832 810 aa16.28■□□□□ 0.2
NUP50-202ENST00000396096 NMD3Q96D46 503 aaKnown RBP16.28■□□□□ 0.2
NUP50-202ENST00000396096 FBXL20Q96IG2 436 aa16.28■□□□□ 0.2
NUP50-202ENST00000396096 HPS4Q9NQG7 708 aa16.28■□□□□ 0.2
NUP50-202ENST00000396096 VPS29Q9UBQ0 182 aa16.28■□□□□ 0.2
NUP50-202ENST00000396096 RUVBL1Q9Y265 456 aaKnown RBP16.28■□□□□ 0.2
NUP50-202ENST00000396096 E7EQ34 232 aa16.27■□□□□ 0.2
NUP50-202ENST00000396096 ITGB7P26010 798 aa16.27■□□□□ 0.2
NUP50-202ENST00000396096 IMPA1P29218 277 aa16.27■□□□□ 0.2
NUP50-202ENST00000396096 KIR3DL1P43629 444 aa16.27■□□□□ 0.2
NUP50-202ENST00000396096 PREPP48147 710 aa16.27■□□□□ 0.2
NUP50-202ENST00000396096 DYNC1I2Q13409 638 aaKnown RBP16.27■□□□□ 0.2
NUP50-202ENST00000396096 NAE1Q13564 534 aa16.27■□□□□ 0.2
NUP50-202ENST00000396096 PGS1Q32NB8 556 aa16.27■□□□□ 0.2
NUP50-202ENST00000396096 ZNF697Q5TEC3 545 aa16.27■□□□□ 0.2
NUP50-202ENST00000396096 TMEM220Q6QAJ8 160 aa16.27■□□□□ 0.2
NUP50-202ENST00000396096 SVOPLQ8N434 492 aa16.27■□□□□ 0.2
NUP50-202ENST00000396096 RSPRY1Q96DX4 576 aa16.27■□□□□ 0.2
NUP50-202ENST00000396096 EGLN2Q96KS0 407 aa16.27■□□□□ 0.2
NUP50-202ENST00000396096 OR4K3Q96R72 315 aa16.27■□□□□ 0.2
NUP50-202ENST00000396096 PKP4Q99569 1192 aa16.27■□□□□ 0.2
NUP50-202ENST00000396096 TBCDQ9BTW9 1192 aa16.27■□□□□ 0.2
NUP50-202ENST00000396096 GPRC5BQ9NZH0 403 aa16.27■□□□□ 0.2
NUP50-202ENST00000396096 PRRC2BQ5JSZ5 2229 aaKnown RBP16.27■□□□□ 0.19
NUP50-202ENST00000396096 DENND4AQ7Z401 1863 aa16.27■□□□□ 0.19
NUP50-202ENST00000396096 CLGNO14967 610 aa16.27■□□□□ 0.19
NUP50-202ENST00000396096 SOD1P00441 154 aa16.27■□□□□ 0.19
NUP50-202ENST00000396096 CDH2P19022 906 aaPredicted RBP16.27■□□□□ 0.19
NUP50-202ENST00000396096 CDKN2CP42773 168 aa16.27■□□□□ 0.19
NUP50-202ENST00000396096 CCR3P51677 355 aa16.27■□□□□ 0.19
NUP50-202ENST00000396096 MYBPC3Q14896 1274 aa16.27■□□□□ 0.19
NUP50-202ENST00000396096 UGT8Q16880 541 aa16.27■□□□□ 0.19
NUP50-202ENST00000396096 DUOXA1Q1HG43 343 aa16.27■□□□□ 0.19
NUP50-202ENST00000396096 POM121L1PQ3SYA9 428 aa16.27■□□□□ 0.19
NUP50-202ENST00000396096 CCSMST1Q4G0I0 132 aa16.27■□□□□ 0.19
NUP50-202ENST00000396096 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.27■□□□□ 0.19
NUP50-202ENST00000396096 SYT12Q8IV01 421 aa16.27■□□□□ 0.19
NUP50-202ENST00000396096 LILRA3Q8N6C8 439 aaPredicted RBP16.27■□□□□ 0.19
NUP50-202ENST00000396096 ZNF366Q8N895 744 aa16.27■□□□□ 0.19
NUP50-202ENST00000396096 VN1R2Q8NFZ6 395 aa16.27■□□□□ 0.19
NUP50-202ENST00000396096 OR8J2Q8NGG1 315 aa16.27■□□□□ 0.19
NUP50-202ENST00000396096 STARD8Q92502 1023 aa16.27■□□□□ 0.19
NUP50-202ENST00000396096 FOPNLQ96NB1 174 aa16.27■□□□□ 0.19
NUP50-202ENST00000396096 THG1LQ9NWX6 298 aaKnown RBP16.27■□□□□ 0.19
NUP50-202ENST00000396096 USE1Q9NZ43 259 aa16.27■□□□□ 0.19
NUP50-202ENST00000396096 ITM2BQ9Y287 266 aa16.27■□□□□ 0.19
NUP50-202ENST00000396096 KIAA1549LQ6ZVL6 1849 aa16.26■□□□□ 0.19
NUP50-202ENST00000396096 KIAA0100Q14667 2235 aaKnown RBP16.26■□□□□ 0.19
NUP50-202ENST00000396096 KPNA3O00505 521 aaPredicted RBP16.26■□□□□ 0.19
NUP50-202ENST00000396096 RFXANKO14593 260 aa16.26■□□□□ 0.19
NUP50-202ENST00000396096 SCN2BO60939 215 aa16.26■□□□□ 0.19
NUP50-202ENST00000396096 LILRB5O75023 590 aa16.26■□□□□ 0.19
NUP50-202ENST00000396096 RECQL5O94762 991 aaPredicted RBP16.26■□□□□ 0.19
NUP50-202ENST00000396096 PRKD3O94806 890 aa16.26■□□□□ 0.19
NUP50-202ENST00000396096 ALBP02768 609 aa16.26■□□□□ 0.19
NUP50-202ENST00000396096 RB1P06400 928 aa16.26■□□□□ 0.19
NUP50-202ENST00000396096 BDKRB1P46663 353 aa16.26■□□□□ 0.19
NUP50-202ENST00000396096 PNLIPRP1P54315 467 aa16.26■□□□□ 0.19
NUP50-202ENST00000396096 WNT3P56703 355 aa16.26■□□□□ 0.19
NUP50-202ENST00000396096 ELP6Q0PNE2 266 aa16.26■□□□□ 0.19
NUP50-202ENST00000396096 OR4F3Q6IEY1 312 aa16.26■□□□□ 0.19
NUP50-202ENST00000396096 SERPINA11Q86U17 422 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms