RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 ANKRD11Q6UB99 2663 aaPredicted RBP15.92■□□□□ 0.14
CXCL1-201ENST00000395761 A0A087WV48 116 aa15.91■□□□□ 0.14
CXCL1-201ENST00000395761 IGKV1-8A0A0C4DH67 115 aa15.91■□□□□ 0.14
CXCL1-201ENST00000395761 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.91■□□□□ 0.14
CXCL1-201ENST00000395761 RRP8O43159 456 aaKnown RBP15.91■□□□□ 0.14
CXCL1-201ENST00000395761 STK17BO94768 372 aa15.91■□□□□ 0.14
CXCL1-201ENST00000395761 KIAA0754O94854 1291 aa15.91■□□□□ 0.14
CXCL1-201ENST00000395761 FKBP9O95302 570 aa15.91■□□□□ 0.14
CXCL1-201ENST00000395761 ALDOAP04075 364 aaKnown RBP15.91■□□□□ 0.14
CXCL1-201ENST00000395761 CNTFP26441 200 aa15.91■□□□□ 0.14
CXCL1-201ENST00000395761 CD82P27701 267 aa15.91■□□□□ 0.14
CXCL1-201ENST00000395761 CMPK1P30085 196 aa15.91■□□□□ 0.14
CXCL1-201ENST00000395761 AP1S2P56377 157 aa15.91■□□□□ 0.14
CXCL1-201ENST00000395761 IRF9Q00978 393 aa15.91■□□□□ 0.14
CXCL1-201ENST00000395761 IFFO1Q0D2I5 559 aa15.91■□□□□ 0.14
CXCL1-201ENST00000395761 OR4D1Q15615 310 aa15.91■□□□□ 0.14
CXCL1-201ENST00000395761 LGSNQ5TDP6 509 aa15.91■□□□□ 0.14
CXCL1-201ENST00000395761 ICE2Q659A1 982 aa15.91■□□□□ 0.14
CXCL1-201ENST00000395761 BPHLQ86WA6 291 aaPredicted RBP15.91■□□□□ 0.14
CXCL1-201ENST00000395761 SPACA3Q8IXA5 215 aa15.91■□□□□ 0.14
CXCL1-201ENST00000395761 ALKBH8Q96BT7 664 aaKnown RBP15.91■□□□□ 0.14
CXCL1-201ENST00000395761 PTERQ96BW5 349 aa15.91■□□□□ 0.14
CXCL1-201ENST00000395761 FBXL8Q96CD0 374 aa15.91■□□□□ 0.14
CXCL1-201ENST00000395761 MED8Q96G25 268 aa15.91■□□□□ 0.14
CXCL1-201ENST00000395761 PKNOX2Q96KN3 472 aa15.91■□□□□ 0.14
CXCL1-201ENST00000395761 DPH7Q9BTV6 452 aa15.91■□□□□ 0.14
CXCL1-201ENST00000395761 ULBP3Q9BZM4 244 aa15.91■□□□□ 0.14
CXCL1-201ENST00000395761 SPRTNQ9H040 489 aaPredicted RBP15.91■□□□□ 0.14
CXCL1-201ENST00000395761 SNX15Q9NRS6 342 aa15.91■□□□□ 0.14
CXCL1-201ENST00000395761 IGSF5Q9NSI5 407 aa15.91■□□□□ 0.14
CXCL1-201ENST00000395761 EURLQ9NYK6 297 aa15.91■□□□□ 0.14
CXCL1-201ENST00000395761 TMEM184BQ9Y519 407 aaPredicted RBP15.91■□□□□ 0.14
CXCL1-201ENST00000395761 EPG5Q9HCE0 2579 aa15.91■□□□□ 0.14
CXCL1-201ENST00000395761 SNRNP200O75643 2136 aaKnown RBP15.91■□□□□ 0.14
CXCL1-201ENST00000395761 CELSR3Q9NYQ7 3312 aa15.91■□□□□ 0.14
CXCL1-201ENST00000395761 SDK2Q58EX2 2172 aa15.9■□□□□ 0.14
CXCL1-201ENST00000395761 STMND1H3BQB6 276 aa15.9■□□□□ 0.14
CXCL1-201ENST00000395761 KLK10O43240 276 aa15.9■□□□□ 0.14
CXCL1-201ENST00000395761 ATP8B1O43520 1251 aa15.9■□□□□ 0.14
CXCL1-201ENST00000395761 CTSVO60911 334 aa15.9■□□□□ 0.14
CXCL1-201ENST00000395761 CDH16O75309 829 aa15.9■□□□□ 0.14
CXCL1-201ENST00000395761 DLGAP3O95886 979 aa15.9■□□□□ 0.14
CXCL1-201ENST00000395761 NTRK1P04629 796 aa15.9■□□□□ 0.14
CXCL1-201ENST00000395761 C2P06681 752 aa15.9■□□□□ 0.14
CXCL1-201ENST00000395761 MSL3P1P0C860 447 aa15.9■□□□□ 0.14
CXCL1-201ENST00000395761 LIPCP11150 499 aa15.9■□□□□ 0.14
CXCL1-201ENST00000395761 KCNC1P48547 511 aa15.9■□□□□ 0.14
CXCL1-201ENST00000395761 ATP6V0D1P61421 351 aa15.9■□□□□ 0.14
CXCL1-201ENST00000395761 TBPL1P62380 186 aa15.9■□□□□ 0.14
CXCL1-201ENST00000395761 PRDX1Q06830 199 aaKnown RBP15.9■□□□□ 0.14
CXCL1-201ENST00000395761 ZNF844Q08AG5 666 aa15.9■□□□□ 0.14
CXCL1-201ENST00000395761 SRSF6Q13247 344 aaKnown RBP15.9■□□□□ 0.14
CXCL1-201ENST00000395761 COL9A2Q14055 689 aaPredicted RBP15.9■□□□□ 0.14
CXCL1-201ENST00000395761 THEMIS2Q5TEJ8 643 aa15.9■□□□□ 0.14
CXCL1-201ENST00000395761 ADAMTSL2Q86TH1 951 aa15.9■□□□□ 0.14
CXCL1-201ENST00000395761 MCATQ8IVS2 390 aaKnown RBP15.9■□□□□ 0.14
CXCL1-201ENST00000395761 NKD1Q969G9 470 aa15.9■□□□□ 0.14
CXCL1-201ENST00000395761 ZUFSPQ96AP4 578 aa15.9■□□□□ 0.14
CXCL1-201ENST00000395761 PYCR2Q96C36 320 aa15.9■□□□□ 0.14
CXCL1-201ENST00000395761 NXNL1Q96CM4 212 aa15.9■□□□□ 0.14
CXCL1-201ENST00000395761 DPH1Q9BZG8 443 aa15.9■□□□□ 0.14
CXCL1-201ENST00000395761 FANCEQ9HB96 536 aa15.9■□□□□ 0.14
CXCL1-201ENST00000395761 MRPS30Q9NP92 439 aaKnown RBP15.9■□□□□ 0.14
CXCL1-201ENST00000395761 CCDC177Q9NQR7 707 aaPredicted RBP15.9■□□□□ 0.14
CXCL1-201ENST00000395761 INTS7Q9NVH2 962 aaKnown RBP15.9■□□□□ 0.14
CXCL1-201ENST00000395761 WDR70Q9NW82 654 aa15.9■□□□□ 0.14
CXCL1-201ENST00000395761 CUEDC1Q9NWM3 386 aaPredicted RBP15.9■□□□□ 0.14
CXCL1-201ENST00000395761 PSMC3IPQ9P2W1 217 aaPredicted RBP15.9■□□□□ 0.14
CXCL1-201ENST00000395761 SH2B3Q9UQQ2 575 aa15.9■□□□□ 0.14
CXCL1-201ENST00000395761 ACOT9Q9Y305 439 aa15.9■□□□□ 0.14
CXCL1-201ENST00000395761 OARD1Q9Y530 152 aa15.9■□□□□ 0.14
CXCL1-201ENST00000395761 KLK4Q9Y5K2 254 aa15.9■□□□□ 0.14
CXCL1-201ENST00000395761 ZZEF1O43149 2961 aa15.9■□□□□ 0.14
CXCL1-201ENST00000395761 ZFHX4Q86UP3 3567 aa15.89■□□□□ 0.13
CXCL1-201ENST00000395761 A0A096LPK6 155 aa15.89■□□□□ 0.13
CXCL1-201ENST00000395761 PABPN1LA6NDY0 278 aaKnown RBP15.89■□□□□ 0.13
CXCL1-201ENST00000395761 TARM1B6A8C7 271 aa15.89■□□□□ 0.13
CXCL1-201ENST00000395761 TRIM49D1C9J1S8 452 aa15.89■□□□□ 0.13
CXCL1-201ENST00000395761 RAD1O60671 282 aa15.89■□□□□ 0.13
CXCL1-201ENST00000395761 KRT38O76015 456 aa15.89■□□□□ 0.13
CXCL1-201ENST00000395761 TYK2P29597 1187 aa15.89■□□□□ 0.13
CXCL1-201ENST00000395761 SERPINB8P50452 374 aa15.89■□□□□ 0.13
CXCL1-201ENST00000395761 TLE3Q04726 772 aa15.89■□□□□ 0.13
CXCL1-201ENST00000395761 C18orf21Q32NC0 220 aaPredicted RBP15.89■□□□□ 0.13
CXCL1-201ENST00000395761 PRAMEF13Q5VWM6 474 aa15.89■□□□□ 0.13
CXCL1-201ENST00000395761 FBXO42Q6P3S6 717 aa15.89■□□□□ 0.13
CXCL1-201ENST00000395761 CYB5D1Q6P9G0 228 aa15.89■□□□□ 0.13
CXCL1-201ENST00000395761 TIFABQ6ZNK6 161 aa15.89■□□□□ 0.13
CXCL1-201ENST00000395761 LRRC69Q6ZNQ3 347 aa15.89■□□□□ 0.13
CXCL1-201ENST00000395761 TBC1D1Q86TI0 1168 aaPredicted RBP15.89■□□□□ 0.13
CXCL1-201ENST00000395761 TMEM126BQ8IUX1 230 aa15.89■□□□□ 0.13
CXCL1-201ENST00000395761 CENPLQ8N0S6 344 aaPredicted RBP15.89■□□□□ 0.13
CXCL1-201ENST00000395761 SLC38A9Q8NBW4 561 aa15.89■□□□□ 0.13
CXCL1-201ENST00000395761 GALNT6Q8NCL4 622 aa15.89■□□□□ 0.13
CXCL1-201ENST00000395761 OR8K5Q8NH50 307 aa15.89■□□□□ 0.13
CXCL1-201ENST00000395761 OR56A3Q8NH54 315 aa15.89■□□□□ 0.13
CXCL1-201ENST00000395761 KCTD4Q8WVF5 259 aa15.89■□□□□ 0.13
CXCL1-201ENST00000395761 MTBPQ96DY7 904 aa15.89■□□□□ 0.13
CXCL1-201ENST00000395761 FCRL4Q96PJ5 515 aa15.89■□□□□ 0.13
CXCL1-201ENST00000395761 SGPP1Q9BX95 441 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms