RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 CMPK2Q5EBM0 449 aa14.65□□□□□ -0.06
SCAF11-204ENST00000395454 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.65□□□□□ -0.06
SCAF11-204ENST00000395454 IL27RAQ6UWB1 636 aa14.65□□□□□ -0.06
SCAF11-204ENST00000395454 ATP6V1E2Q96A05 226 aa14.65□□□□□ -0.06
SCAF11-204ENST00000395454 TMEM159Q96B96 161 aa14.65□□□□□ -0.06
SCAF11-204ENST00000395454 CCDC124Q96CT7 223 aaKnown RBP14.65□□□□□ -0.06
SCAF11-204ENST00000395454 PPP3R2Q96LZ3 170 aa14.65□□□□□ -0.06
SCAF11-204ENST00000395454 WDR92Q96MX6 357 aa14.65□□□□□ -0.06
SCAF11-204ENST00000395454 FAM86C1Q9NVL1 165 aa14.65□□□□□ -0.06
SCAF11-204ENST00000395454 TMEM181Q9P2C4 612 aa14.65□□□□□ -0.06
SCAF11-204ENST00000395454 MAP10Q9P2G4 905 aa14.65□□□□□ -0.06
SCAF11-204ENST00000395454 ABCD2Q9UBJ2 740 aa14.65□□□□□ -0.06
SCAF11-204ENST00000395454 ANGPTL2Q9UKU9 493 aa14.65□□□□□ -0.06
SCAF11-204ENST00000395454 LRRC42Q9Y546 428 aa14.65□□□□□ -0.06
SCAF11-204ENST00000395454 SPTY2D1-AS1A0A0U1RR47 76 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 C17orf113A0A1B0GUU1 675 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 A0A1W2PP18 115 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 FXYD1O00168 92 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 LIN7AO14910 233 aaPredicted RBP14.64□□□□□ -0.07
SCAF11-204ENST00000395454 ANKRD28O15084 1053 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 VILLO15195 856 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 VEGFDO43915 354 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 UGDHO60701 494 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 CLDN9O95484 217 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 CFIP05156 583 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 CEACAM5P06731 702 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 ANPEPP15144 967 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 ZNF8P17098 575 aaPredicted RBP14.64□□□□□ -0.07
SCAF11-204ENST00000395454 PRPH2P23942 346 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 ZNF33BQ06732 778 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 PTCHD3Q3KNS1 767 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 MMEL1Q495T6 779 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 SPATS1Q496A3 300 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 TMEM220Q6QAJ8 160 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 RD3Q7Z3Z2 195 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 TRAPPC5Q8IUR0 188 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 MINDY1Q8N5J2 469 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 NRG4Q8WWG1 115 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 PDXPQ96GD0 296 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 IRF2BPLQ9H1B7 796 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 FGF22Q9HCT0 170 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 GPR27Q9NS67 375 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 KLQ9UEF7 1012 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 CD300AQ9UGN4 299 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 GPR34Q9UPC5 381 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 RNF11Q9Y3C5 154 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 SPEGQ15772 3267 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 TDRD6O60522 2096 aaKnown RBP14.64□□□□□ -0.07
SCAF11-204ENST00000395454 A0A1B0GVT2 93 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 SLC28A1O00337 649 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 MANBAO00462 879 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 TRIM38O00635 465 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 SCAMP1O15126 338 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 EEDO75530 441 aaKnown RBP14.64□□□□□ -0.07
SCAF11-204ENST00000395454 BCAS2O75934 225 aaPredicted RBP14.64□□□□□ -0.07
SCAF11-204ENST00000395454 XRCC1P18887 633 aaPredicted RBP14.64□□□□□ -0.07
SCAF11-204ENST00000395454 JAK1P23458 1154 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 HOXD12P35452 270 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 PLOD1Q02809 727 aaPredicted RBP14.64□□□□□ -0.07
SCAF11-204ENST00000395454 E2F2Q14209 437 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 CCDC6Q16204 474 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 SYTL3Q4VX76 610 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 PEAR1Q5VY43 1037 aaPredicted RBP14.64□□□□□ -0.07
SCAF11-204ENST00000395454 PRMT9Q6P2P2 845 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 PARGQ86W56 976 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 DCP2Q8IU60 420 aaKnown RBP14.64□□□□□ -0.07
SCAF11-204ENST00000395454 SNX31Q8N9S9 440 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 PROKR1Q8TCW9 393 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 ASB9Q96DX5 294 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 LOXL4Q96JB6 756 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 HOPXQ9BPY8 73 aaPredicted RBP14.64□□□□□ -0.07
SCAF11-204ENST00000395454 ARRDC1-AS1Q9H2J1 176 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 ACTL8Q9H568 366 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 BCAP29Q9UHQ4 241 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 CROTQ9UKG9 612 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 SLC17A4Q9Y2C5 497 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 PRKAB1Q9Y478 270 aa14.64□□□□□ -0.07
SCAF11-204ENST00000395454 PRSS38A1L453 326 aa14.63□□□□□ -0.07
SCAF11-204ENST00000395454 FAM234BA2RU67 622 aa14.63□□□□□ -0.07
SCAF11-204ENST00000395454 PATE3B3GLJ2 98 aa14.63□□□□□ -0.07
SCAF11-204ENST00000395454 E7ENX8 843 aa14.63□□□□□ -0.07
SCAF11-204ENST00000395454 NR5A2O00482 541 aa14.63□□□□□ -0.07
SCAF11-204ENST00000395454 RGS14O43566 566 aa14.63□□□□□ -0.07
SCAF11-204ENST00000395454 ULK1O75385 1050 aa14.63□□□□□ -0.07
SCAF11-204ENST00000395454 SLC22A3O75751 556 aa14.63□□□□□ -0.07
SCAF11-204ENST00000395454 PCSK2P16519 638 aa14.63□□□□□ -0.07
SCAF11-204ENST00000395454 MPLP40238 635 aa14.63□□□□□ -0.07
SCAF11-204ENST00000395454 VHLP40337 213 aa14.63□□□□□ -0.07
SCAF11-204ENST00000395454 FZD2Q14332 565 aa14.63□□□□□ -0.07
SCAF11-204ENST00000395454 RPS6KA2Q15349 733 aa14.63□□□□□ -0.07
SCAF11-204ENST00000395454 DUOXA1Q1HG43 343 aa14.63□□□□□ -0.07
SCAF11-204ENST00000395454 ZNF542PQ5EBM4 170 aa14.63□□□□□ -0.07
SCAF11-204ENST00000395454 TRIM61Q5EBN2 209 aa14.63□□□□□ -0.07
SCAF11-204ENST00000395454 CRTC3Q6UUV7 619 aa14.63□□□□□ -0.07
SCAF11-204ENST00000395454 SCIMPQ6UWF3 145 aa14.63□□□□□ -0.07
SCAF11-204ENST00000395454 LRRC74BQ6ZQY2 392 aa14.63□□□□□ -0.07
SCAF11-204ENST00000395454 RABEPKQ7Z6M1 372 aa14.63□□□□□ -0.07
SCAF11-204ENST00000395454 ZNF547Q8IVP9 402 aa14.63□□□□□ -0.07
SCAF11-204ENST00000395454 FNDC5Q8NAU1 212 aa14.63□□□□□ -0.07
SCAF11-204ENST00000395454 SKA2Q8WVK7 121 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms