RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 TBC1D3Q8IZP1 549 aaPredicted RBP16.8■□□□□ 0.28
SIN3A-203ENST00000394949 NAT16Q8N8M0 369 aa16.8■□□□□ 0.28
SIN3A-203ENST00000394949 OR10H4Q8NGA5 316 aa16.8■□□□□ 0.28
SIN3A-203ENST00000394949 CCDC107Q8WV48 283 aa16.8■□□□□ 0.28
SIN3A-203ENST00000394949 FUBP3Q96I24 572 aaKnown RBP eCLIP16.8■□□□□ 0.28
SIN3A-203ENST00000394949 CNDP2Q96KP4 475 aaKnown RBP16.8■□□□□ 0.28
SIN3A-203ENST00000394949 MEAF6Q9HAF1 191 aa16.8■□□□□ 0.28
SIN3A-203ENST00000394949 SLC28A3Q9HAS3 691 aa16.8■□□□□ 0.28
SIN3A-203ENST00000394949 PCDHB3Q9Y5E6 796 aa16.8■□□□□ 0.28
SIN3A-203ENST00000394949 PDPK1O15530 556 aa16.8■□□□□ 0.28
SIN3A-203ENST00000394949 T-ENOLP0DO92 83 aa16.8■□□□□ 0.28
SIN3A-203ENST00000394949 ACADLP28330 430 aa16.8■□□□□ 0.28
SIN3A-203ENST00000394949 HMGCS1Q01581 520 aa16.8■□□□□ 0.28
SIN3A-203ENST00000394949 SYPL2Q5VXT5 272 aa16.8■□□□□ 0.28
SIN3A-203ENST00000394949 ZNF367Q7RTV3 350 aa16.8■□□□□ 0.28
SIN3A-203ENST00000394949 CPA6Q8N4T0 437 aa16.8■□□□□ 0.28
SIN3A-203ENST00000394949 OR13C4Q8NGS5 318 aa16.8■□□□□ 0.28
SIN3A-203ENST00000394949 FARSBQ9NSD9 589 aaKnown RBP16.8■□□□□ 0.28
SIN3A-203ENST00000394949 PAK1IP1Q9NWT1 392 aaPredicted RBP16.8■□□□□ 0.28
SIN3A-203ENST00000394949 MAGEB3O15480 346 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 GSTM2P28161 218 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 S100GP29377 79 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 SLC10A7Q0GE19 358 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 TBRG1Q3YBR2 411 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 COQ5Q5HYK3 327 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 EQTNQ9NQ60 294 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 DLG5Q8TDM6 1919 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 DFNA5O60443 496 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 NFATC3Q12968 1075 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 PIGGQ5H8A4 983 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 CLEC20AQ6ZU45 233 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 TXNDC5Q8NBS9 432 aaKnown RBP16.79■□□□□ 0.28
SIN3A-203ENST00000394949 NCSTNQ92542 709 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 CDK15Q96Q40 435 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 SLC32A1Q9H598 525 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 C14orf105Q9NVL8 296 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 HSPE1-MOB4S4R3N1 261 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 SNED1Q8TER0 1413 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 A0A1W2PRB8 838 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 HCN1O60741 890 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 CDRT1O95170 752 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 SPATA31D3P0C874 917 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 BMP2P12643 396 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 OR52E8Q6IFG1 317 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 NANOGP8Q6NSW7 305 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 BORAQ6PGQ7 559 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 SPATA31D4Q6ZUB0 917 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 CEP76Q8TAP6 659 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 C2orf15Q8WU43 125 aaKnown RBP16.79■□□□□ 0.28
SIN3A-203ENST00000394949 UCK2Q9BZX2 261 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 MIR1-1HGQ9H1L0 117 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 NANOGQ9H9S0 305 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 CPNE5Q9HCH3 593 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 MYOCOSA0A1B0GUC4 107 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 FUOMA2VDF0 154 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 ARL5CA6NH57 179 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 PCDH7O60245 1069 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 PRAMEF12O95522 483 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 CHRM5P08912 532 aaPredicted RBP16.79■□□□□ 0.28
SIN3A-203ENST00000394949 G6PDP11413 515 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 RFC2P35250 354 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 RBM34P42696 430 aaKnown RBP16.79■□□□□ 0.28
SIN3A-203ENST00000394949 VARS2Q5ST30 1063 aaKnown RBP16.79■□□□□ 0.28
SIN3A-203ENST00000394949 SAMD14Q8IZD0 417 aaPredicted RBP16.79■□□□□ 0.28
SIN3A-203ENST00000394949 HSH2DQ96JZ2 352 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 IL4I1Q96RQ9 567 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 SYT17Q9BSW7 474 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 ANKRD60Q9BZ19 345 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 IMP3Q9NV31 184 aaKnown RBP16.79■□□□□ 0.28
SIN3A-203ENST00000394949 FKBP14Q9NWM8 211 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 EBF1Q9UH73 591 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 TLR6Q9Y2C9 796 aa16.79■□□□□ 0.28
SIN3A-203ENST00000394949 IQCF5A8MTL0 148 aa16.78■□□□□ 0.28
SIN3A-203ENST00000394949 H1F0P07305 194 aaKnown RBP16.78■□□□□ 0.28
SIN3A-203ENST00000394949 ARCN1P48444 511 aaKnown RBP16.78■□□□□ 0.28
SIN3A-203ENST00000394949 SMSP52788 366 aa16.78■□□□□ 0.28
SIN3A-203ENST00000394949 NUDT6P53370 316 aa16.78■□□□□ 0.28
SIN3A-203ENST00000394949 AP1S2P56377 157 aa16.78■□□□□ 0.28
SIN3A-203ENST00000394949 INCA1Q0VD86 236 aa16.78■□□□□ 0.28
SIN3A-203ENST00000394949 PHYKPLQ8IUZ5 450 aa16.78■□□□□ 0.28
SIN3A-203ENST00000394949 ALDH16A1Q8IZ83 802 aa16.78■□□□□ 0.28
SIN3A-203ENST00000394949 TSEN15Q8WW01 171 aaKnown RBP16.78■□□□□ 0.28
SIN3A-203ENST00000394949 CHIAQ9BZP6 476 aa16.78■□□□□ 0.28
SIN3A-203ENST00000394949 SLC6A15Q9H2J7 730 aa16.78■□□□□ 0.28
SIN3A-203ENST00000394949 RDH8Q9NYR8 311 aa16.78■□□□□ 0.28
SIN3A-203ENST00000394949 RIMKLBQ9ULI2 386 aa16.78■□□□□ 0.28
SIN3A-203ENST00000394949 PCDHGB6Q9Y5F9 930 aa16.78■□□□□ 0.28
SIN3A-203ENST00000394949 GOLGA4Q13439 2230 aaKnown RBP16.78■□□□□ 0.28
SIN3A-203ENST00000394949 OR51F1A6NGY5 319 aa16.78■□□□□ 0.28
SIN3A-203ENST00000394949 DCLK1O15075 740 aa16.78■□□□□ 0.28
SIN3A-203ENST00000394949 POP4O95707 220 aaKnown RBP16.78■□□□□ 0.28
SIN3A-203ENST00000394949 EIPR1Q53HC9 387 aa16.78■□□□□ 0.28
SIN3A-203ENST00000394949 SPIN4Q56A73 249 aa16.78■□□□□ 0.28
SIN3A-203ENST00000394949 ATAT1Q5SQI0 421 aa16.78■□□□□ 0.28
SIN3A-203ENST00000394949 SYVN1Q86TM6 617 aa16.78■□□□□ 0.28
SIN3A-203ENST00000394949 RBM23Q86U06 439 aaKnown RBP16.78■□□□□ 0.28
SIN3A-203ENST00000394949 CILP2Q8IUL8 1156 aa16.78■□□□□ 0.28
SIN3A-203ENST00000394949 CHCHD4Q8N4Q1 142 aa16.78■□□□□ 0.28
SIN3A-203ENST00000394949 TMEM80Q96HE8 168 aa16.78■□□□□ 0.28
SIN3A-203ENST00000394949 PCBD2Q9H0N5 130 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms