RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 UBE2R2Q712K3 238 aaPredicted RBP18.31■□□□□ 0.52
CBX1-202ENST00000393408 L3MBTL4Q8NA19 623 aa18.31■□□□□ 0.52
CBX1-202ENST00000393408 TET1Q8NFU7 2136 aa18.31■□□□□ 0.52
CBX1-202ENST00000393408 NDNFQ8TB73 568 aa18.31■□□□□ 0.52
CBX1-202ENST00000393408 TRNAU1APQ9NX07 287 aaKnown RBP18.31■□□□□ 0.52
CBX1-202ENST00000393408 YIPF1Q9Y548 306 aa18.31■□□□□ 0.52
CBX1-202ENST00000393408 EVPLLA8MZ36 301 aa18.31■□□□□ 0.52
CBX1-202ENST00000393408 MYO1GB0I1T2 1018 aa18.31■□□□□ 0.52
CBX1-202ENST00000393408 TOR1BO14657 336 aa18.31■□□□□ 0.52
CBX1-202ENST00000393408 DNAJA1P31689 397 aaKnown RBP18.31■□□□□ 0.52
CBX1-202ENST00000393408 SLC6A12P48065 614 aa18.31■□□□□ 0.52
CBX1-202ENST00000393408 TRPC1P48995 793 aa18.31■□□□□ 0.52
CBX1-202ENST00000393408 ARHGDIAP52565 204 aa18.31■□□□□ 0.52
CBX1-202ENST00000393408 IL1RL1Q01638 556 aa18.31■□□□□ 0.52
CBX1-202ENST00000393408 SEMG2Q02383 582 aa18.31■□□□□ 0.52
CBX1-202ENST00000393408 MTAPQ13126 283 aa18.31■□□□□ 0.52
CBX1-202ENST00000393408 SYT6Q5T7P8 510 aaPredicted RBP18.31■□□□□ 0.52
CBX1-202ENST00000393408 ZCCHC8Q6NZY4 707 aaKnown RBP18.31■□□□□ 0.52
CBX1-202ENST00000393408 NEK5Q6P3R8 708 aa18.31■□□□□ 0.52
CBX1-202ENST00000393408 ZZZ3Q8IYH5 903 aa18.31■□□□□ 0.52
CBX1-202ENST00000393408 TCAIMQ8N3R3 496 aa18.31■□□□□ 0.52
CBX1-202ENST00000393408 ZFP90Q8TF47 636 aa18.31■□□□□ 0.52
CBX1-202ENST00000393408 S100ZQ8WXG8 99 aa18.31■□□□□ 0.52
CBX1-202ENST00000393408 APOLD1Q96LR9 279 aa18.31■□□□□ 0.52
CBX1-202ENST00000393408 ZIC5Q96T25 663 aa18.31■□□□□ 0.52
CBX1-202ENST00000393408 SLC12A9Q9BXP2 914 aa18.31■□□□□ 0.52
CBX1-202ENST00000393408 ATP13A3Q9H7F0 1226 aa18.31■□□□□ 0.52
CBX1-202ENST00000393408 GMPPBQ9Y5P6 360 aa18.31■□□□□ 0.52
CBX1-202ENST00000393408 HTTP42858 3142 aa18.31■□□□□ 0.52
CBX1-202ENST00000393408 MICAL3Q7RTP6 2002 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 A0A1W2PQ45 241 aaPredicted RBP18.3■□□□□ 0.52
CBX1-202ENST00000393408 A0A1W2PQY0 241 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 ZNF821O75541 412 aaPredicted RBP18.3■□□□□ 0.52
CBX1-202ENST00000393408 ACPPP15309 386 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 PCSK2P16519 638 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 AMD1P17707 334 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 FPR1P21462 350 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 KIR3DL1P43629 444 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 PTPN5P54829 565 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 ZXDBP98169 803 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 DUOXA1Q1HG43 343 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 VMACQ2NL98 169 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 CRTC1Q6UUV9 634 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 Q6ZNB5 142 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 TMEM150AQ86TG1 271 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 ZNF461Q8TAF7 563 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 ZNF300Q96RE9 604 aaPredicted RBP18.3■□□□□ 0.52
CBX1-202ENST00000393408 LYSMD1Q96S90 227 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 SCN3BQ9NY72 215 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 DAPK2Q9UIK4 370 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 hCG_2039718K7EN88 272 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 M0R3G1 203 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 EIF3FO00303 357 aaPredicted RBP18.3■□□□□ 0.52
CBX1-202ENST00000393408 HOXA2O43364 376 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 PRAMEF4O60810 478 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 ABLIM3O94929 683 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 KCNK5O95279 499 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 MT-ND2P03891 347 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 FABP3P05413 133 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 ENGP17813 658 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 AOAHP28039 575 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 HOXA9P31269 272 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 HPCAL1P37235 193 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 PRAMEF9Q5VWM5 478 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 NOXRED1Q6NXP6 359 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 TTC29Q8NA56 475 aaPredicted RBP18.3■□□□□ 0.52
CBX1-202ENST00000393408 COPS8Q99627 209 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 APOL4Q9BPW4 351 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 REXO4Q9GZR2 422 aaKnown RBP18.3■□□□□ 0.52
CBX1-202ENST00000393408 ABCG8Q9H221 673 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 RNF186Q9NXI6 227 aa18.3■□□□□ 0.52
CBX1-202ENST00000393408 NDRG4Q9ULP0 352 aaKnown RBP18.3■□□□□ 0.52
CBX1-202ENST00000393408 CLIC1O00299 241 aa18.29■□□□□ 0.52
CBX1-202ENST00000393408 FPGTO14772 594 aa18.29■□□□□ 0.52
CBX1-202ENST00000393408 JRKO75564 520 aa18.29■□□□□ 0.52
CBX1-202ENST00000393408 DIRAS1O95057 198 aa18.29■□□□□ 0.52
CBX1-202ENST00000393408 VLDLRP98155 873 aa18.29■□□□□ 0.52
CBX1-202ENST00000393408 CLCA4Q14CN2 919 aa18.29■□□□□ 0.52
CBX1-202ENST00000393408 PTCHD3Q3KNS1 767 aa18.29■□□□□ 0.52
CBX1-202ENST00000393408 VTCN1Q7Z7D3 282 aa18.29■□□□□ 0.52
CBX1-202ENST00000393408 GALNT10Q86SR1 603 aa18.29■□□□□ 0.52
CBX1-202ENST00000393408 P2RY8Q86VZ1 359 aa18.29■□□□□ 0.52
CBX1-202ENST00000393408 MFSD4AQ8N468 514 aa18.29■□□□□ 0.52
CBX1-202ENST00000393408 TAMM41Q96BW9 452 aa18.29■□□□□ 0.52
CBX1-202ENST00000393408 PYCR2Q96C36 320 aa18.29■□□□□ 0.52
CBX1-202ENST00000393408 FCRL1Q96LA6 429 aa18.29■□□□□ 0.52
CBX1-202ENST00000393408 RHNO1Q9BSD3 238 aa18.29■□□□□ 0.52
CBX1-202ENST00000393408 STARD7Q9NQZ5 370 aa18.29■□□□□ 0.52
CBX1-202ENST00000393408 FBXO8Q9NRD0 319 aa18.29■□□□□ 0.52
CBX1-202ENST00000393408 PDP1Q9P0J1 537 aaPredicted RBP18.29■□□□□ 0.52
CBX1-202ENST00000393408 RPS6KA6Q9UK32 745 aa18.29■□□□□ 0.52
CBX1-202ENST00000393408 PMF1-BGLAPU3KQ54 211 aa18.29■□□□□ 0.52
CBX1-202ENST00000393408 SERTM1A2A2V5 107 aa18.29■□□□□ 0.52
CBX1-202ENST00000393408 ADAM23O75077 832 aa18.29■□□□□ 0.52
CBX1-202ENST00000393408 IGSF6O95976 241 aa18.29■□□□□ 0.52
CBX1-202ENST00000393408 C8GP07360 202 aa18.29■□□□□ 0.52
CBX1-202ENST00000393408 GPX2P18283 190 aa18.29■□□□□ 0.52
CBX1-202ENST00000393408 PRPS1L1P21108 318 aa18.29■□□□□ 0.52
CBX1-202ENST00000393408 ALDH4A1P30038 563 aa18.29■□□□□ 0.52
CBX1-202ENST00000393408 KDELR2P33947 212 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms