RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 ZUFSPQ96AP4 578 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 SHISA4Q96DD7 197 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 EHD1Q9H4M9 534 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 SIX4Q9UIU6 781 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 RASGRP1O95267 797 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 CLIC3O95833 236 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 SERPINA3P01011 423 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 GSTT2BP0CG30 244 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 CSNK2A2P19784 350 aaPredicted RBP12.81□□□□□ -0.36
LCA5-202ENST00000392959 GNALP38405 381 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 RAB2AP61019 212 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 PPP3R1P63098 170 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 CDK6Q00534 326 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 EMX2Q04743 252 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 SPATS1Q496A3 300 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 SPIN4Q56A73 249 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 THOC7Q6I9Y2 204 aaKnown RBP12.81□□□□□ -0.36
LCA5-202ENST00000392959 NATD1Q8N6N6 113 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 OR6K6Q8NGW6 343 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 POF1BQ8WVV4 589 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 FATE1Q969F0 183 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 GDAP2Q9NXN4 497 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 GIMAP2Q9UG22 337 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 TMED5Q9Y3A6 229 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 KCTD3Q9Y597 815 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 A0A0G2JLL6 359 aaPredicted RBP12.8□□□□□ -0.36
LCA5-202ENST00000392959 DIRAS1O95057 198 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 MPIP34949 423 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 GDF5P43026 501 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 NCBP2P52298 156 aaKnown RBP eCLIP12.8□□□□□ -0.36
LCA5-202ENST00000392959 PHC1P78364 1004 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 CLEC12AQ5QGZ9 265 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 PRRT2Q7Z6L0 340 aaPredicted RBP12.8□□□□□ -0.36
LCA5-202ENST00000392959 OR5AK3PQ8NH89 298 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 GPR151Q8TDV0 419 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 C12orf66Q96MD2 445 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 SMOC2Q9H3U7 446 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 TLE6Q9H808 572 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 TPT1P8Q9HAU6 139 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 PDCD5O14737 125 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 NRP1O14786 923 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 NPPAP01160 153 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 DBIP07108 87 aaKnown RBP12.8□□□□□ -0.36
LCA5-202ENST00000392959 GSTM3P21266 225 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 PRKACGP22612 351 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 ARSFP54793 590 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 ARPC4P59998 168 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 CARD16Q5EG05 197 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 CDCA2Q69YH5 1023 aaPredicted RBP12.8□□□□□ -0.36
LCA5-202ENST00000392959 MARCH9Q86YJ5 346 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 BORCS6Q96GS4 357 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 TBX5Q99593 518 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 EXO5Q9H790 373 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 EIF3KQ9UBQ5 218 aaKnown RBP12.8□□□□□ -0.36
LCA5-202ENST00000392959 MSRAQ9UJ68 235 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 CDH7Q9ULB5 785 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 PCDHGB7Q9Y5F8 929 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 STYXL1Q9Y6J8 313 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 ZNF432O94892 652 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 ENTPD1P49961 510 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 VBP1P61758 197 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 DEFB115Q30KQ5 88 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 ZCCHC12Q6PEW1 402 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 GOLGA7Q7Z5G4 137 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 SLC22A16Q86VW1 577 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 TXNDC5Q8NBS9 432 aaKnown RBP12.8□□□□□ -0.36
LCA5-202ENST00000392959 KCNA7Q96RP8 456 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 MAPKAP1Q9BPZ7 522 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 CHIAQ9BZP6 476 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 ELAC1Q9H777 363 aaKnown RBP12.8□□□□□ -0.36
LCA5-202ENST00000392959 DUS2Q9NX74 493 aaKnown RBP12.8□□□□□ -0.36
LCA5-202ENST00000392959 P2RX2Q9UBL9 471 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 C3P01024 1663 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.8□□□□□ -0.36
LCA5-202ENST00000392959 PCP4L1A6NKN8 68 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 E7ESA3 106 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 WRBO00258 174 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 MANBAO00462 879 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 WNT9AO14904 365 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 YES1P07947 543 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 CD72P21854 359 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 DDX6P26196 483 aaKnown RBP eCLIP12.8□□□□□ -0.36
LCA5-202ENST00000392959 DNAJB13P59910 316 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 EMC10Q5UCC4 262 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 OR10Q1Q8NGQ4 319 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 ZNF420Q8TAQ5 688 aaPredicted RBP12.8□□□□□ -0.36
LCA5-202ENST00000392959 SUSD3Q96L08 255 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 GAL3ST1Q99999 423 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 NSUN3Q9H649 340 aaKnown RBP12.8□□□□□ -0.36
LCA5-202ENST00000392959 FARSBQ9NSD9 589 aaKnown RBP12.8□□□□□ -0.36
LCA5-202ENST00000392959 MKLN1Q9UL63 735 aa12.8□□□□□ -0.36
LCA5-202ENST00000392959 OR6C70A6NIJ9 312 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 BHMG1C9JSJ3 638 aaPredicted RBP12.79□□□□□ -0.36
LCA5-202ENST00000392959 FKTNO75072 461 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 MTX2O75431 263 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 C8AP07357 584 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 LINGO3P0C6S8 592 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 PTPN2P17706 415 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 ALAS2P22557 587 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 ARCN1P48444 511 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms