RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 ABT1Q9ULW3 272 aaKnown RBP2.65□□□□□ -1.99
TRAV40-201ENST00000390467 WIPI2Q9Y4P8 454 aa2.65□□□□□ -1.99
TRAV40-201ENST00000390467 MYH14Q7Z406 1995 aaKnown RBP2.65□□□□□ -1.99
TRAV40-201ENST00000390467 A6NCN8 305 aa2.64□□□□□ -1.99
TRAV40-201ENST00000390467 ARPC2O15144 300 aa2.64□□□□□ -1.99
TRAV40-201ENST00000390467 TEX28O15482 410 aa2.64□□□□□ -1.99
TRAV40-201ENST00000390467 ZBED4O75132 1171 aa2.64□□□□□ -1.99
TRAV40-201ENST00000390467 HOXD4P09016 255 aaPredicted RBP2.64□□□□□ -1.99
TRAV40-201ENST00000390467 THEGLP0DJG4 465 aa2.64□□□□□ -1.99
TRAV40-201ENST00000390467 RPL35AP18077 110 aaKnown RBP2.64□□□□□ -1.99
TRAV40-201ENST00000390467 SOX3P41225 446 aa2.64□□□□□ -1.99
TRAV40-201ENST00000390467 CLCN4P51793 760 aa2.64□□□□□ -1.99
TRAV40-201ENST00000390467 MAPK12P53778 367 aa2.64□□□□□ -1.99
TRAV40-201ENST00000390467 IRX4P78413 519 aa2.64□□□□□ -1.99
TRAV40-201ENST00000390467 TMEM132DQ14C87 1099 aa2.64□□□□□ -1.99
TRAV40-201ENST00000390467 MTHFSDQ2M296 383 aaKnown RBP2.64□□□□□ -1.99
TRAV40-201ENST00000390467 RNF212Q495C1 297 aa2.64□□□□□ -1.99
TRAV40-201ENST00000390467 OR10S1Q8NGN2 331 aa2.64□□□□□ -1.99
TRAV40-201ENST00000390467 ZPLD1Q8TCW7 415 aa2.64□□□□□ -1.99
TRAV40-201ENST00000390467 SLAMF9Q96A28 289 aa2.64□□□□□ -1.99
TRAV40-201ENST00000390467 SLC22A18Q96BI1 424 aa2.64□□□□□ -1.99
TRAV40-201ENST00000390467 SPACA9Q96E40 222 aaPredicted RBP2.64□□□□□ -1.99
TRAV40-201ENST00000390467 THOC1Q96FV9 657 aaKnown RBP2.64□□□□□ -1.99
TRAV40-201ENST00000390467 C2orf48Q96LS8 159 aa2.64□□□□□ -1.99
TRAV40-201ENST00000390467 SFXN2Q96NB2 322 aa2.64□□□□□ -1.99
TRAV40-201ENST00000390467 LPAR4Q99677 370 aa2.64□□□□□ -1.99
TRAV40-201ENST00000390467 MAP3K3Q99759 626 aa2.64□□□□□ -1.99
TRAV40-201ENST00000390467 GHITMQ9H3K2 345 aa2.64□□□□□ -1.99
TRAV40-201ENST00000390467 Q9H8V8 135 aa2.64□□□□□ -1.99
TRAV40-201ENST00000390467 TRPV4Q9HBA0 871 aa2.64□□□□□ -1.99
TRAV40-201ENST00000390467 THAP10Q9P2Z0 257 aaPredicted RBP2.64□□□□□ -1.99
TRAV40-201ENST00000390467 CTSZQ9UBR2 303 aa2.64□□□□□ -1.99
TRAV40-201ENST00000390467 ZNF69Q9UC07 566 aa2.64□□□□□ -1.99
TRAV40-201ENST00000390467 TBC1D29Q9UFV1 150 aa2.64□□□□□ -1.99
TRAV40-201ENST00000390467 R4GN57 208 aa2.64□□□□□ -1.99
TRAV40-201ENST00000390467 LOC105371242A0A075B767 164 aa2.63□□□□□ -1.99
TRAV40-201ENST00000390467 NEMP2A6NFY4 417 aa2.63□□□□□ -1.99
TRAV40-201ENST00000390467 A8MXK9 166 aa2.63□□□□□ -1.99
TRAV40-201ENST00000390467 H0YAE9 185 aa2.63□□□□□ -1.99
TRAV40-201ENST00000390467 IGKV3-15P01624 115 aa2.63□□□□□ -1.99
TRAV40-201ENST00000390467 IGHV2-70P01814 119 aa2.63□□□□□ -1.99
TRAV40-201ENST00000390467 DUX4L4P0CJ87 422 aa2.63□□□□□ -1.99
TRAV40-201ENST00000390467 GP1BBP13224 206 aa2.63□□□□□ -1.99
TRAV40-201ENST00000390467 PDHA2P29803 388 aa2.63□□□□□ -1.99
TRAV40-201ENST00000390467 CDC25CP30307 473 aa2.63□□□□□ -1.99
TRAV40-201ENST00000390467 PTGER4P35408 488 aa2.63□□□□□ -1.99
TRAV40-201ENST00000390467 DNA2P51530 1060 aa2.63□□□□□ -1.99
TRAV40-201ENST00000390467 STAT2P52630 851 aa2.63□□□□□ -1.99
TRAV40-201ENST00000390467 TAB1Q15750 504 aa2.63□□□□□ -1.99
TRAV40-201ENST00000390467 GPR33Q49SQ1 333 aa2.63□□□□□ -1.99
TRAV40-201ENST00000390467 FAM205BPQ63HN1 556 aa2.63□□□□□ -1.99
TRAV40-201ENST00000390467 SEL1L3Q68CR1 1132 aa2.63□□□□□ -1.99
TRAV40-201ENST00000390467 LGI2Q8N0V4 545 aa2.63□□□□□ -1.99
TRAV40-201ENST00000390467 METTL4Q8N3J2 472 aa2.63□□□□□ -1.99
TRAV40-201ENST00000390467 MINDY1Q8N5J2 469 aa2.63□□□□□ -1.99
TRAV40-201ENST00000390467 CFAP61Q8NHU2 1237 aa2.63□□□□□ -1.99
TRAV40-201ENST00000390467 NXNL1Q96CM4 212 aa2.63□□□□□ -1.99
TRAV40-201ENST00000390467 LGMNQ99538 433 aa2.63□□□□□ -1.99
TRAV40-201ENST00000390467 BARD1Q99728 777 aaKnown RBP2.63□□□□□ -1.99
TRAV40-201ENST00000390467 FAM49AQ9H0Q0 323 aaPredicted RBP2.63□□□□□ -1.99
TRAV40-201ENST00000390467 GOLPH3LQ9H4A5 285 aa2.63□□□□□ -1.99
TRAV40-201ENST00000390467 CHST11Q9NPF2 352 aa2.63□□□□□ -1.99
TRAV40-201ENST00000390467 PRMT7Q9NVM4 692 aaPredicted RBP2.63□□□□□ -1.99
TRAV40-201ENST00000390467 HAUS2Q9NVX0 235 aa2.63□□□□□ -1.99
TRAV40-201ENST00000390467 CRNNQ9UBG3 495 aaPredicted RBP2.63□□□□□ -1.99
TRAV40-201ENST00000390467 ADD3Q9UEY8 706 aaKnown RBP2.63□□□□□ -1.99
TRAV40-201ENST00000390467 WDR83OSQ9Y284 106 aa2.63□□□□□ -1.99
TRAV40-201ENST00000390467 TRBV5-5A0A0J9YX44 114 aa2.62□□□□□ -1.99
TRAV40-201ENST00000390467 A0A1W2PPM1 405 aa2.62□□□□□ -1.99
TRAV40-201ENST00000390467 A0A1W2PPQ1 181 aa2.62□□□□□ -1.99
TRAV40-201ENST00000390467 SHISA9B4DS77 424 aa2.62□□□□□ -1.99
TRAV40-201ENST00000390467 CCL24O00175 119 aa2.62□□□□□ -1.99
TRAV40-201ENST00000390467 O00370 1275 aa2.62□□□□□ -1.99
TRAV40-201ENST00000390467 SNAP91O60641 907 aa2.62□□□□□ -1.99
TRAV40-201ENST00000390467 LRCH4O75427 683 aa2.62□□□□□ -1.99
TRAV40-201ENST00000390467 CEACAM4O75871 244 aa2.62□□□□□ -1.99
TRAV40-201ENST00000390467 CSH1P0DML2 217 aa2.62□□□□□ -1.99
TRAV40-201ENST00000390467 CSH2P0DML3 217 aa2.62□□□□□ -1.99
TRAV40-201ENST00000390467 MTHFRP42898 656 aa2.62□□□□□ -1.99
TRAV40-201ENST00000390467 OR3A2P47893 321 aa2.62□□□□□ -1.99
TRAV40-201ENST00000390467 ITGA7Q13683 1181 aa2.62□□□□□ -1.99
TRAV40-201ENST00000390467 FAM189A2Q15884 450 aa2.62□□□□□ -1.99
TRAV40-201ENST00000390467 PHKG1Q16816 387 aa2.62□□□□□ -1.99
TRAV40-201ENST00000390467 C15orf32Q32M92 178 aa2.62□□□□□ -1.99
TRAV40-201ENST00000390467 HIGD2BQ4VC39 106 aa2.62□□□□□ -1.99
TRAV40-201ENST00000390467 MFSD12Q6NUT3 480 aa2.62□□□□□ -1.99
TRAV40-201ENST00000390467 IL17RELQ6ZVW7 336 aa2.62□□□□□ -1.99
TRAV40-201ENST00000390467 ZFAND4Q86XD8 727 aa2.62□□□□□ -1.99
TRAV40-201ENST00000390467 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.62□□□□□ -1.99
TRAV40-201ENST00000390467 MCUQ8NE86 351 aa2.62□□□□□ -1.99
TRAV40-201ENST00000390467 TREX2Q9BQ50 279 aaPredicted RBP2.62□□□□□ -1.99
TRAV40-201ENST00000390467 NYXQ9GZU5 481 aa2.62□□□□□ -1.99
TRAV40-201ENST00000390467 HOXD1Q9GZZ0 328 aa2.62□□□□□ -1.99
TRAV40-201ENST00000390467 PARLQ9H300 379 aa2.62□□□□□ -1.99
TRAV40-201ENST00000390467 B3GAT2Q9NPZ5 323 aa2.62□□□□□ -1.99
TRAV40-201ENST00000390467 RNF150Q9ULK6 438 aa2.62□□□□□ -1.99
TRAV40-201ENST00000390467 ARID2Q68CP9 1835 aa2.61□□□□□ -1.99
TRAV40-201ENST00000390467 LOC100509620A0A075B734 347 aa2.61□□□□□ -1.99
TRAV40-201ENST00000390467 A0A1W2PPK0 400 aa2.61□□□□□ -1.99
TRAV40-201ENST00000390467 hCG_1807616A0A1W2PRN6 198 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms