RNA–Protein interactions for RNA: ENST00000381323.7

FAM49A-201, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49A, Length 4,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-201ENST00000381323 COPG1Q9Y678 874 aaKnown RBP7.55□□□□□ -1.2
FAM49A-201ENST00000381323 NSG1A0A0A6YYJ2 146 aa7.55□□□□□ -1.2
FAM49A-201ENST00000381323 URADA6NGE7 173 aa7.55□□□□□ -1.2
FAM49A-201ENST00000381323 SRPX2O60687 465 aaPredicted RBP7.55□□□□□ -1.2
FAM49A-201ENST00000381323 SLC35G6P0C7Q6 338 aa7.55□□□□□ -1.2
FAM49A-201ENST00000381323 FOXN2P32314 431 aa7.55□□□□□ -1.2
FAM49A-201ENST00000381323 SH3BGRP55822 239 aaPredicted RBP7.55□□□□□ -1.2
FAM49A-201ENST00000381323 RGS1Q08116 209 aa7.55□□□□□ -1.2
FAM49A-201ENST00000381323 SSPNQ14714 243 aa7.55□□□□□ -1.2
FAM49A-201ENST00000381323 HSP90AA5PQ58FG0 334 aa7.55□□□□□ -1.2
FAM49A-201ENST00000381323 AGAP7PQ5VUJ5 663 aa7.55□□□□□ -1.2
FAM49A-201ENST00000381323 LRRC8BQ6P9F7 803 aa7.55□□□□□ -1.2
FAM49A-201ENST00000381323 LINC00696Q6ZRV3 163 aa7.55□□□□□ -1.2
FAM49A-201ENST00000381323 FAM20CQ8IXL6 584 aa7.55□□□□□ -1.2
FAM49A-201ENST00000381323 LMNTD2Q8IXW0 634 aa7.55□□□□□ -1.2
FAM49A-201ENST00000381323 CSNK1A1LQ8N752 337 aa7.55□□□□□ -1.2
FAM49A-201ENST00000381323 AGAP4Q96P64 663 aa7.55□□□□□ -1.2
FAM49A-201ENST00000381323 PCBD2Q9H0N5 130 aa7.55□□□□□ -1.2
FAM49A-201ENST00000381323 ANKHQ9HCJ1 492 aa7.55□□□□□ -1.2
FAM49A-201ENST00000381323 EIF2B3Q9NR50 452 aaKnown RBP7.55□□□□□ -1.2
FAM49A-201ENST00000381323 P4HTMQ9NXG6 502 aa7.55□□□□□ -1.2
FAM49A-201ENST00000381323 ZNF282Q9UDV7 671 aaPredicted RBP7.55□□□□□ -1.2
FAM49A-201ENST00000381323 C3orf18Q9UK00 162 aa7.55□□□□□ -1.2
FAM49A-201ENST00000381323 FRYLO94915 3013 aa7.55□□□□□ -1.2
FAM49A-201ENST00000381323 H7C0S8 307 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 NIPSNAP2O75323 286 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 TTC4O95801 387 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 DLGAP3O95886 979 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 OGNP20774 298 aaKnown RBP7.54□□□□□ -1.2
FAM49A-201ENST00000381323 OR1D4P47884 311 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 SRSF11Q05519 484 aaKnown RBP7.54□□□□□ -1.2
FAM49A-201ENST00000381323 RBPJQ06330 500 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 IGFBP7Q16270 282 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 KLHL38Q2WGJ6 581 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 RAPH1Q70E73 1250 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 HPS6Q86YV9 775 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 SLC35F6Q8N357 371 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 GALNT16Q8N428 558 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 BMPERQ8N8U9 685 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 ATL1Q8WXF7 558 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 ZFYVE21Q9BQ24 234 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 COPS7BQ9H9Q2 264 aaPredicted RBP7.54□□□□□ -1.2
FAM49A-201ENST00000381323 STARD5Q9NSY2 213 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 SPATA7Q9P0W8 599 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 TMPRSS11EQ9UL52 423 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 PRSS21Q9Y6M0 314 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 MYO15AQ9UKN7 3530 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 ESRRAP11474 423 aaPredicted RBP7.54□□□□□ -1.2
FAM49A-201ENST00000381323 SLC5A12Q1EHB4 618 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 IZUMO3Q5VZ72 239 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 KCNMB4Q86W47 210 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 FAM98AQ8NCA5 519 aaKnown RBP7.54□□□□□ -1.2
FAM49A-201ENST00000381323 ZCCHC10Q8TBK6 192 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 INPP5DQ92835 1189 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 STMN2Q93045 179 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 ZUFSPQ96AP4 578 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 ZNF501Q96CX3 271 aaPredicted RBP7.54□□□□□ -1.2
FAM49A-201ENST00000381323 RANBP9Q96S59 729 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 CENPKQ9BS16 269 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 RASSF4Q9H2L5 321 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 RHBGQ9H310 441 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 MID2Q9UJV3 735 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 PLXNB3Q9ULL4 1909 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 HYKKA2RU49 373 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 CBSLP0DN79 551 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 TPSB2P20231 275 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 CBSP35520 551 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 COILP38432 576 aaPredicted RBP7.54□□□□□ -1.2
FAM49A-201ENST00000381323 CTBP1Q13363 440 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 RCN2Q14257 317 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 TPSAB1Q15661 275 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 UGT8Q16880 541 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 SUSD1Q6UWL2 747 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 EXT2Q93063 718 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 RAB3IPQ96QF0 476 aaPredicted RBP7.54□□□□□ -1.2
FAM49A-201ENST00000381323 SIDT1Q9NXL6 827 aaKnown RBP7.54□□□□□ -1.2
FAM49A-201ENST00000381323 SUCOQ9UBS9 1254 aaKnown RBP7.54□□□□□ -1.2
FAM49A-201ENST00000381323 RIMKLBQ9ULI2 386 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 ICKQ9UPZ9 632 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 SPACA6W5XKT8 324 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 PTPRBP23467 1997 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 GUCA1CO95843 209 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 KRT15P19012 456 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 WT1P19544 449 aaPredicted RBP7.54□□□□□ -1.2
FAM49A-201ENST00000381323 SKIV2L2P42285 1042 aaKnown RBP7.54□□□□□ -1.2
FAM49A-201ENST00000381323 UAP1Q16222 522 aaPredicted RBP7.54□□□□□ -1.2
FAM49A-201ENST00000381323 HP1BP3Q5SSJ5 553 aaPredicted RBP7.54□□□□□ -1.2
FAM49A-201ENST00000381323 YOD1Q5VVQ6 348 aaPredicted RBP7.54□□□□□ -1.2
FAM49A-201ENST00000381323 CAPN13Q6MZZ7 669 aaPredicted RBP7.54□□□□□ -1.2
FAM49A-201ENST00000381323 PACS1Q6VY07 963 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 CAMKVQ8NCB2 501 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 TADA1Q96BN2 335 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 RSRC1Q96IZ7 334 aaKnown RBP7.54□□□□□ -1.2
FAM49A-201ENST00000381323 MRM3Q9HC36 420 aaKnown RBP7.54□□□□□ -1.2
FAM49A-201ENST00000381323 FBXO5Q9UKT4 447 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 SOX13Q9UN79 622 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 PCDHGB7Q9Y5F8 929 aa7.54□□□□□ -1.2
FAM49A-201ENST00000381323 SVILO95425 2214 aa7.53□□□□□ -1.2
FAM49A-201ENST00000381323 A0A088AWK7 358 aa7.53□□□□□ -1.2
FAM49A-201ENST00000381323 PHF2O75151 1096 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms