RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 PPT2Q9UMR5 302 aa15.82■□□□□ 0.12
NKX3-1-201ENST00000380871 CCL26Q9Y258 94 aa15.82■□□□□ 0.12
NKX3-1-201ENST00000380871 UGT2B4P06133 528 aa15.82■□□□□ 0.12
NKX3-1-201ENST00000380871 EFNA1P20827 205 aaPredicted RBP15.82■□□□□ 0.12
NKX3-1-201ENST00000380871 EPS8Q12929 822 aa15.82■□□□□ 0.12
NKX3-1-201ENST00000380871 RAB33AQ14088 237 aa15.82■□□□□ 0.12
NKX3-1-201ENST00000380871 CATSPEREQ5SY80 951 aa15.82■□□□□ 0.12
NKX3-1-201ENST00000380871 ZSWIM9Q86XI8 627 aa15.82■□□□□ 0.12
NKX3-1-201ENST00000380871 RORBQ92753 470 aa15.82■□□□□ 0.12
NKX3-1-201ENST00000380871 PYURFQ96I23 114 aa15.82■□□□□ 0.12
NKX3-1-201ENST00000380871 MROQ9BYG7 248 aa15.82■□□□□ 0.12
NKX3-1-201ENST00000380871 FAM126AQ9BYI3 521 aaPredicted RBP15.82■□□□□ 0.12
NKX3-1-201ENST00000380871 MTG2Q9H4K7 406 aa15.82■□□□□ 0.12
NKX3-1-201ENST00000380871 HMG20AQ9NP66 347 aa15.82■□□□□ 0.12
NKX3-1-201ENST00000380871 H7C0S8 307 aa15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 M0R3G1 203 aa15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 GLUD1P00367 558 aa15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 MT-ND2P03891 347 aa15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 ZNF7P17097 686 aaPredicted RBP15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 ITGALP20701 1170 aa15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 CD9P21926 228 aa15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 MTA1Q13330 715 aa15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 INAQ16352 499 aa15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 DOK6Q6PKX4 331 aa15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 MFSD4AQ8N468 514 aa15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 OVCA2Q8WZ82 227 aa15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 OARD1Q9Y530 152 aa15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 KPNA4O00629 521 aaPredicted RBP15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 CXCL14O95715 111 aa15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 PDYNP01213 254 aa15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 RETP07949 1114 aa15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 PTPN6P29350 595 aa15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 CALHM3Q86XJ0 350 aa15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 ZNF366Q8N895 744 aa15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 PIK3C3Q8NEB9 887 aa15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 PDLIM5Q96HC4 596 aaKnown RBP15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 BTBD2Q9BX70 525 aa15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 TRIT1Q9H3H1 467 aaKnown RBP15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 PARVBQ9HBI1 364 aa15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 SLC16A6O15403 523 aa15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 CXCL10P02778 98 aa15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 C8AP07357 584 aa15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 BPIP17213 487 aa15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 EPORP19235 508 aa15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 HSPA14Q0VDF9 509 aa15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 ZXDCQ2QGD7 858 aaPredicted RBP15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 INAVAQ3KP66 663 aa15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 PLPP6Q8IY26 295 aa15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 SORCS1Q8WY21 1168 aa15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 PYCR2Q96C36 320 aa15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 DPH2Q9BQC3 489 aaPredicted RBP15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 ORC6Q9Y5N6 252 aa15.81■□□□□ 0.12
NKX3-1-201ENST00000380871 RFPL2O75678 378 aa15.8■□□□□ 0.12
NKX3-1-201ENST00000380871 HMGCLP35914 325 aa15.8■□□□□ 0.12
NKX3-1-201ENST00000380871 CNKSR3Q6P9H4 555 aa15.8■□□□□ 0.12
NKX3-1-201ENST00000380871 CCDC71Q8IV32 467 aaPredicted RBP15.8■□□□□ 0.12
NKX3-1-201ENST00000380871 HEPHQ9BQS7 1158 aa15.8■□□□□ 0.12
NKX3-1-201ENST00000380871 OR51B4Q9Y5P0 310 aa15.8■□□□□ 0.12
NKX3-1-201ENST00000380871 GLYATL1P3A0A0U1RQE8 302 aa15.8■□□□□ 0.12
NKX3-1-201ENST00000380871 NPIPB15A6NHN6 443 aaPredicted RBP15.8■□□□□ 0.12
NKX3-1-201ENST00000380871 FAM220BPB1ANY3 271 aa15.8■□□□□ 0.12
NKX3-1-201ENST00000380871 NEDD8-MDP1E9PL57 170 aa15.8■□□□□ 0.12
NKX3-1-201ENST00000380871 LCKP06239 509 aa15.8■□□□□ 0.12
NKX3-1-201ENST00000380871 CCDC159P0C7I6 412 aa15.8■□□□□ 0.12
NKX3-1-201ENST00000380871 RYKP34925 604 aa15.8■□□□□ 0.12
NKX3-1-201ENST00000380871 SLC35A2P78381 396 aa15.8■□□□□ 0.12
NKX3-1-201ENST00000380871 TRIM46Q7Z4K8 759 aa15.8■□□□□ 0.12
NKX3-1-201ENST00000380871 DCAF4L2Q8NA75 395 aa15.8■□□□□ 0.12
NKX3-1-201ENST00000380871 TCEAL4Q96EI5 215 aa15.8■□□□□ 0.12
NKX3-1-201ENST00000380871 ALG14Q96F25 216 aa15.8■□□□□ 0.12
NKX3-1-201ENST00000380871 ABHD8Q96I13 439 aa15.8■□□□□ 0.12
NKX3-1-201ENST00000380871 SLC28A1O00337 649 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 RPS14P62263 151 aaKnown RBP15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 VLDLRP98155 873 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 TOP3AQ13472 1001 aaPredicted RBP15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 CLCA4Q14CN2 919 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 CARTPTQ16568 116 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 OR4F3Q6IEY1 312 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 P2RY8Q86VZ1 359 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 TMEM25Q86YD3 366 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 STK40Q8N2I9 435 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 ZNF540Q8NDQ6 660 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 FBLIM1Q8WUP2 373 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 EBPLQ9BY08 206 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 SH3BGRLO75368 114 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 TRBC1P01850 177 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 S100A3P33764 101 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 RPS3AP61247 264 aaKnown RBP15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 NFATC2Q13469 925 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 BOP1Q14137 746 aaKnown RBP15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 SF1Q15637 639 aaKnown RBP15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 PLEKHG6Q3KR16 790 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 INO80DQ53TQ3 878 aaPredicted RBP15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 SHQ1Q6PI26 577 aaKnown RBP15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 Q6ZPB1 254 aaPredicted RBP15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 ADCK1Q86TW2 530 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 HIPK1Q86Z02 1210 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 GLB1L3Q8NCI6 653 aaPredicted RBP15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 GPR26Q8NDV2 337 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 YIPF6Q96EC8 236 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms