RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 TTLL8A6PVC2 850 aa13.29□□□□□ -0.28
PRPF18-202ENST00000378572 PRMT5O14744 637 aaPredicted RBP13.29□□□□□ -0.28
PRPF18-202ENST00000378572 ESR1P03372 595 aa13.29□□□□□ -0.28
PRPF18-202ENST00000378572 KLK3P07288 261 aaPredicted RBP13.29□□□□□ -0.28
PRPF18-202ENST00000378572 F7P08709 466 aaPredicted RBP13.29□□□□□ -0.28
PRPF18-202ENST00000378572 ATXN8OSP0DMR3 200 aa13.29□□□□□ -0.28
PRPF18-202ENST00000378572 PYGBP11216 843 aa13.29□□□□□ -0.28
PRPF18-202ENST00000378572 NDUFS1P28331 727 aa13.29□□□□□ -0.28
PRPF18-202ENST00000378572 USP10Q14694 798 aaKnown RBP13.29□□□□□ -0.28
PRPF18-202ENST00000378572 UGT8Q16880 541 aa13.29□□□□□ -0.28
PRPF18-202ENST00000378572 SYVN1Q86TM6 617 aa13.29□□□□□ -0.28
PRPF18-202ENST00000378572 LCA5Q86VQ0 697 aa13.29□□□□□ -0.28
PRPF18-202ENST00000378572 C4orf33Q8N1A6 199 aa13.29□□□□□ -0.28
PRPF18-202ENST00000378572 D2HGDHQ8N465 521 aa13.29□□□□□ -0.28
PRPF18-202ENST00000378572 HM13Q8TCT9 377 aa13.29□□□□□ -0.28
PRPF18-202ENST00000378572 LCN9Q8WX39 176 aa13.29□□□□□ -0.28
PRPF18-202ENST00000378572 FERD3LQ96RJ6 166 aa13.29□□□□□ -0.28
PRPF18-202ENST00000378572 AARSD1Q9BTE6 412 aaKnown RBP13.29□□□□□ -0.28
PRPF18-202ENST00000378572 SLC25A23Q9BV35 468 aa13.29□□□□□ -0.28
PRPF18-202ENST00000378572 TRIM55Q9BYV6 548 aa13.29□□□□□ -0.28
PRPF18-202ENST00000378572 P2RY12Q9H244 342 aa13.29□□□□□ -0.28
PRPF18-202ENST00000378572 SRMSQ9H3Y6 488 aa13.29□□□□□ -0.28
PRPF18-202ENST00000378572 AKIRIN1Q9H9L7 192 aaPredicted RBP13.29□□□□□ -0.28
PRPF18-202ENST00000378572 ZDHHC3Q9NYG2 299 aa13.29□□□□□ -0.28
PRPF18-202ENST00000378572 SLC39A10Q9ULF5 831 aa13.29□□□□□ -0.28
PRPF18-202ENST00000378572 SNX7Q9UNH6 387 aa13.29□□□□□ -0.28
PRPF18-202ENST00000378572 HEBP2Q9Y5Z4 205 aa13.29□□□□□ -0.28
PRPF18-202ENST00000378572 COL12A1Q99715 3063 aa13.29□□□□□ -0.28
PRPF18-202ENST00000378572 KLHL33A6NCF5 533 aa13.28□□□□□ -0.28
PRPF18-202ENST00000378572 IFRD1O00458 451 aaPredicted RBP13.28□□□□□ -0.28
PRPF18-202ENST00000378572 VPS4BO75351 444 aa13.28□□□□□ -0.28
PRPF18-202ENST00000378572 PKMP14618 531 aaKnown RBP13.28□□□□□ -0.28
PRPF18-202ENST00000378572 STMN1P16949 149 aa13.28□□□□□ -0.28
PRPF18-202ENST00000378572 CYP2A7P20853 494 aa13.28□□□□□ -0.28
PRPF18-202ENST00000378572 CRABP2P29373 138 aa13.28□□□□□ -0.28
PRPF18-202ENST00000378572 CCL11P51671 97 aa13.28□□□□□ -0.28
PRPF18-202ENST00000378572 KPNA2P52292 529 aaKnown RBP13.28□□□□□ -0.28
PRPF18-202ENST00000378572 RAB10P61026 200 aa13.28□□□□□ -0.28
PRPF18-202ENST00000378572 SRSF1Q07955 248 aaKnown RBP eCLIP13.28□□□□□ -0.28
PRPF18-202ENST00000378572 IL10RAQ13651 578 aa13.28□□□□□ -0.28
PRPF18-202ENST00000378572 BCL7AQ4VC05 210 aa13.28□□□□□ -0.28
PRPF18-202ENST00000378572 RBM20Q5T481 1227 aaKnown RBP13.28□□□□□ -0.28
PRPF18-202ENST00000378572 HECTD2Q5U5R9 776 aa13.28□□□□□ -0.28
PRPF18-202ENST00000378572 ZNF549Q6P9A3 640 aa13.28□□□□□ -0.28
PRPF18-202ENST00000378572 FAM26EQ8N5C1 309 aa13.28□□□□□ -0.28
PRPF18-202ENST00000378572 LILRA3Q8N6C8 439 aaPredicted RBP13.28□□□□□ -0.28
PRPF18-202ENST00000378572 GPATCH11Q8N954 259 aa13.28□□□□□ -0.28
PRPF18-202ENST00000378572 HEXDCQ8WVB3 486 aa13.28□□□□□ -0.28
PRPF18-202ENST00000378572 THAP4Q8WY91 577 aa13.28□□□□□ -0.28
PRPF18-202ENST00000378572 MIB2Q96AX9 1013 aa13.28□□□□□ -0.28
PRPF18-202ENST00000378572 PPM1MQ96MI6 270 aa13.28□□□□□ -0.28
PRPF18-202ENST00000378572 COPS8Q99627 209 aa13.28□□□□□ -0.28
PRPF18-202ENST00000378572 CHST8Q9H2A9 424 aa13.28□□□□□ -0.28
PRPF18-202ENST00000378572 CCDC68Q9H2F9 335 aa13.28□□□□□ -0.28
PRPF18-202ENST00000378572 POPDC3Q9HBV1 291 aa13.28□□□□□ -0.28
PRPF18-202ENST00000378572 SEMA5BQ9P283 1151 aa13.28□□□□□ -0.28
PRPF18-202ENST00000378572 MAP10Q9P2G4 905 aa13.28□□□□□ -0.28
PRPF18-202ENST00000378572 VPS4AQ9UN37 437 aa13.28□□□□□ -0.28
PRPF18-202ENST00000378572 G3BP2Q9UN86 482 aaKnown RBP13.28□□□□□ -0.28
PRPF18-202ENST00000378572 FARSAQ9Y285 508 aaKnown RBP13.28□□□□□ -0.28
PRPF18-202ENST00000378572 CRYL1Q9Y2S2 319 aa13.28□□□□□ -0.28
PRPF18-202ENST00000378572 VWA7Q9Y334 891 aa13.28□□□□□ -0.28
PRPF18-202ENST00000378572 TMEM120BA0PK00 339 aa13.27□□□□□ -0.28
PRPF18-202ENST00000378572 SLC9B1P1A6NJY1 282 aa13.27□□□□□ -0.28
PRPF18-202ENST00000378572 TMEM150CB9EJG8 249 aa13.27□□□□□ -0.28
PRPF18-202ENST00000378572 H3BMM5 538 aa13.27□□□□□ -0.28
PRPF18-202ENST00000378572 COPEO14579 308 aa13.27□□□□□ -0.28
PRPF18-202ENST00000378572 TM9SF1O15321 606 aa13.27□□□□□ -0.28
PRPF18-202ENST00000378572 C2P06681 752 aa13.27□□□□□ -0.28
PRPF18-202ENST00000378572 GSTA1P08263 222 aa13.27□□□□□ -0.28
PRPF18-202ENST00000378572 COL6A2P12110 1019 aa13.27□□□□□ -0.28
PRPF18-202ENST00000378572 FDXRP22570 491 aa13.27□□□□□ -0.28
PRPF18-202ENST00000378572 CRHR1P34998 444 aa13.27□□□□□ -0.28
PRPF18-202ENST00000378572 NSG1P42857 185 aa13.27□□□□□ -0.28
PRPF18-202ENST00000378572 PREPP48147 710 aa13.27□□□□□ -0.28
PRPF18-202ENST00000378572 CCT5P48643 541 aa13.27□□□□□ -0.28
PRPF18-202ENST00000378572 SLC12A2P55011 1212 aa13.27□□□□□ -0.28
PRPF18-202ENST00000378572 TAS2R39P59534 338 aa13.27□□□□□ -0.28
PRPF18-202ENST00000378572 CMC1Q7Z7K0 106 aa13.27□□□□□ -0.28
PRPF18-202ENST00000378572 APLFQ8IW19 511 aaPredicted RBP13.27□□□□□ -0.28
PRPF18-202ENST00000378572 ACVR1CQ8NER5 493 aa13.27□□□□□ -0.28
PRPF18-202ENST00000378572 OR8K5Q8NH50 307 aa13.27□□□□□ -0.28
PRPF18-202ENST00000378572 N4BP2L2Q92802 583 aaPredicted RBP13.27□□□□□ -0.28
PRPF18-202ENST00000378572 BIRC8Q96P09 236 aa13.27□□□□□ -0.28
PRPF18-202ENST00000378572 SELENOSQ9BQE4 189 aa13.27□□□□□ -0.28
PRPF18-202ENST00000378572 CCM2Q9BSQ5 444 aa13.27□□□□□ -0.28
PRPF18-202ENST00000378572 PCMTD2Q9NV79 361 aa13.27□□□□□ -0.28
PRPF18-202ENST00000378572 DCDC2Q9UHG0 476 aa13.27□□□□□ -0.28
PRPF18-202ENST00000378572 LRRK2Q5S007 2527 aa13.27□□□□□ -0.28
PRPF18-202ENST00000378572 A0A096LPK6 155 aa13.27□□□□□ -0.29
PRPF18-202ENST00000378572 GOLGA8RI6L899 631 aa13.27□□□□□ -0.29
PRPF18-202ENST00000378572 MATN2O00339 956 aa13.27□□□□□ -0.29
PRPF18-202ENST00000378572 GLRA3O75311 464 aa13.27□□□□□ -0.29
PRPF18-202ENST00000378572 ZWINTO95229 277 aa13.27□□□□□ -0.29
PRPF18-202ENST00000378572 WISP3O95389 354 aaPredicted RBP13.27□□□□□ -0.29
PRPF18-202ENST00000378572 PDGFAP04085 211 aa13.27□□□□□ -0.29
PRPF18-202ENST00000378572 SLC26A3P40879 764 aa13.27□□□□□ -0.29
PRPF18-202ENST00000378572 PRAMEF17Q5VTA0 474 aa13.27□□□□□ -0.29
PRPF18-202ENST00000378572 ENDOVQ8N8Q3 282 aaKnown RBP13.27□□□□□ -0.29
PRPF18-202ENST00000378572 ZFPM2Q8WW38 1151 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms