RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 DNAJA1P31689 397 aaKnown RBP17.5■□□□□ 0.39
GNE-201ENST00000377902 GRK3P35626 688 aa17.5■□□□□ 0.39
GNE-201ENST00000377902 CRISP3P54108 245 aa17.5■□□□□ 0.39
GNE-201ENST00000377902 DEPDC1Q5TB30 811 aa17.5■□□□□ 0.39
GNE-201ENST00000377902 KIAA1614Q5VZ46 1190 aa17.5■□□□□ 0.39
GNE-201ENST00000377902 NCEH1Q6PIU2 408 aa17.5■□□□□ 0.39
GNE-201ENST00000377902 PRSS48Q7RTY5 328 aa17.5■□□□□ 0.39
GNE-201ENST00000377902 HSH2DQ96JZ2 352 aa17.5■□□□□ 0.39
GNE-201ENST00000377902 GABARAPL1Q9H0R8 117 aa17.5■□□□□ 0.39
GNE-201ENST00000377902 SAMD4AQ9UPU9 718 aaKnown RBP17.5■□□□□ 0.39
GNE-201ENST00000377902 AIREO43918 545 aa17.49■□□□□ 0.39
GNE-201ENST00000377902 ZNF7P17097 686 aaPredicted RBP17.49■□□□□ 0.39
GNE-201ENST00000377902 ENGP17813 658 aa17.49■□□□□ 0.39
GNE-201ENST00000377902 AQP1P29972 269 aa17.49■□□□□ 0.39
GNE-201ENST00000377902 MAGEA11P43364 429 aa17.49■□□□□ 0.39
GNE-201ENST00000377902 PCYT1AP49585 367 aa17.49■□□□□ 0.39
GNE-201ENST00000377902 RGS4P49798 205 aa17.49■□□□□ 0.39
GNE-201ENST00000377902 CXCR4P61073 352 aa17.49■□□□□ 0.39
GNE-201ENST00000377902 FOXD4Q12950 439 aaPredicted RBP17.49■□□□□ 0.39
GNE-201ENST00000377902 C5orf22Q49AR2 442 aa17.49■□□□□ 0.39
GNE-201ENST00000377902 LINC00299Q6ZSB3 139 aa17.49■□□□□ 0.39
GNE-201ENST00000377902 TSPYL5Q86VY4 417 aaPredicted RBP17.49■□□□□ 0.39
GNE-201ENST00000377902 APOLD1Q96LR9 279 aa17.49■□□□□ 0.39
GNE-201ENST00000377902 NTMT1Q9BV86 223 aa17.49■□□□□ 0.39
GNE-201ENST00000377902 LOC100506127A0A0U1RQW1 187 aa17.49■□□□□ 0.39
GNE-201ENST00000377902 A0A1W2PQ67 120 aa17.49■□□□□ 0.39
GNE-201ENST00000377902 A6NL46 340 aa17.49■□□□□ 0.39
GNE-201ENST00000377902 NT5C1B-RDH14C9J2C7 533 aa17.49■□□□□ 0.39
GNE-201ENST00000377902 DUSP11O75319 330 aaKnown RBP17.49■□□□□ 0.39
GNE-201ENST00000377902 STK16O75716 305 aa17.49■□□□□ 0.39
GNE-201ENST00000377902 KCNK5O95279 499 aa17.49■□□□□ 0.39
GNE-201ENST00000377902 NUDT7P0C024 238 aa17.49■□□□□ 0.39
GNE-201ENST00000377902 COL6A1P12109 1028 aa17.49■□□□□ 0.39
GNE-201ENST00000377902 TCEA1P23193 301 aaKnown RBP17.49■□□□□ 0.39
GNE-201ENST00000377902 HMGCLP35914 325 aa17.49■□□□□ 0.39
GNE-201ENST00000377902 SLC19A1P41440 591 aa17.49■□□□□ 0.39
GNE-201ENST00000377902 NUDT6P53370 316 aa17.49■□□□□ 0.39
GNE-201ENST00000377902 NPRL3Q12980 569 aa17.49■□□□□ 0.39
GNE-201ENST00000377902 PLEKHG6Q3KR16 790 aa17.49■□□□□ 0.39
GNE-201ENST00000377902 ZNF404Q494X3 552 aa17.49■□□□□ 0.39
GNE-201ENST00000377902 SVOPQ8N4V2 548 aa17.49■□□□□ 0.39
GNE-201ENST00000377902 ZBTB2Q8N680 514 aa17.49■□□□□ 0.39
GNE-201ENST00000377902 TMEM184CQ9NVA4 438 aa17.49■□□□□ 0.39
GNE-201ENST00000377902 THUMPD1Q9NXG2 353 aaKnown RBP17.49■□□□□ 0.39
GNE-201ENST00000377902 MAN2B2Q9Y2E5 1009 aa17.49■□□□□ 0.39
GNE-201ENST00000377902 PCDHB1Q9Y5F3 818 aa17.49■□□□□ 0.39
GNE-201ENST00000377902 PABPN1LA6NDY0 278 aaKnown RBP17.48■□□□□ 0.39
GNE-201ENST00000377902 CLIC1O00299 241 aa17.48■□□□□ 0.39
GNE-201ENST00000377902 CLDN7O95471 211 aa17.48■□□□□ 0.39
GNE-201ENST00000377902 CLDN9O95484 217 aa17.48■□□□□ 0.39
GNE-201ENST00000377902 IL1RNP18510 177 aa17.48■□□□□ 0.39
GNE-201ENST00000377902 ATF6P18850 670 aa17.48■□□□□ 0.39
GNE-201ENST00000377902 FPR1P21462 350 aa17.48■□□□□ 0.39
GNE-201ENST00000377902 DGKAP23743 735 aa17.48■□□□□ 0.39
GNE-201ENST00000377902 ATP5C1P36542 298 aaKnown RBP17.48■□□□□ 0.39
GNE-201ENST00000377902 CXorf57Q6NSI4 855 aaKnown RBP17.48■□□□□ 0.39
GNE-201ENST00000377902 ZNF621Q6ZSS3 439 aa17.48■□□□□ 0.39
GNE-201ENST00000377902 SPATC1Q76KD6 591 aa17.48■□□□□ 0.39
GNE-201ENST00000377902 SYTL1Q8IYJ3 562 aa17.48■□□□□ 0.39
GNE-201ENST00000377902 CARNMT1Q8N4J0 409 aa17.48■□□□□ 0.39
GNE-201ENST00000377902 BEND7Q8N7W2 519 aaPredicted RBP17.48■□□□□ 0.39
GNE-201ENST00000377902 TRIB2Q92519 343 aa17.48■□□□□ 0.39
GNE-201ENST00000377902 ITPAQ9BY32 194 aa17.48■□□□□ 0.39
GNE-201ENST00000377902 IL26Q9NPH9 171 aa17.48■□□□□ 0.39
GNE-201ENST00000377902 TRPS1Q9UHF7 1281 aa17.48■□□□□ 0.39
GNE-201ENST00000377902 DSCR3O14972 297 aa17.48■□□□□ 0.39
GNE-201ENST00000377902 SNPHO15079 494 aa17.48■□□□□ 0.39
GNE-201ENST00000377902 CORO1AP31146 461 aaKnown RBP17.48■□□□□ 0.39
GNE-201ENST00000377902 KDELR2P33947 212 aa17.48■□□□□ 0.39
GNE-201ENST00000377902 SLC11A2P49281 568 aa17.48■□□□□ 0.39
GNE-201ENST00000377902 CYP4F2P78329 520 aa17.48■□□□□ 0.39
GNE-201ENST00000377902 NFATC2Q13469 925 aa17.48■□□□□ 0.39
GNE-201ENST00000377902 GPRC6AQ5T6X5 926 aa17.48■□□□□ 0.39
GNE-201ENST00000377902 RAVER1Q8IY67 606 aaKnown RBP17.48■□□□□ 0.39
GNE-201ENST00000377902 CLECL1Q8IZS7 167 aa17.48■□□□□ 0.39
GNE-201ENST00000377902 CDC26Q8NHZ8 85 aa17.48■□□□□ 0.39
GNE-201ENST00000377902 PANX1Q96RD7 426 aa17.48■□□□□ 0.39
GNE-201ENST00000377902 COPS4Q9BT78 406 aa17.48■□□□□ 0.39
GNE-201ENST00000377902 LHX3Q9UBR4 397 aa17.48■□□□□ 0.39
GNE-201ENST00000377902 DNMT3LQ9UJW3 386 aa17.48■□□□□ 0.39
GNE-201ENST00000377902 RNF6Q9Y252 685 aa17.48■□□□□ 0.39
GNE-201ENST00000377902 PCDHGA6Q9Y5G7 932 aa17.48■□□□□ 0.39
GNE-201ENST00000377902 ILVBLA1L0T0 632 aa17.47■□□□□ 0.39
GNE-201ENST00000377902 AGAP5A6NIR3 686 aa17.47■□□□□ 0.39
GNE-201ENST00000377902 M0R129 80 aa17.47■□□□□ 0.39
GNE-201ENST00000377902 YY2O15391 372 aa17.47■□□□□ 0.39
GNE-201ENST00000377902 SSX4O60224 188 aa17.47■□□□□ 0.39
GNE-201ENST00000377902 CPSF4O95639 269 aaKnown RBP17.47■□□□□ 0.39
GNE-201ENST00000377902 CASP9P55211 416 aa17.47■□□□□ 0.39
GNE-201ENST00000377902 CAMK2GQ13555 558 aaPredicted RBP17.47■□□□□ 0.39
GNE-201ENST00000377902 PROX2Q3B8N5 592 aa17.47■□□□□ 0.39
GNE-201ENST00000377902 DESI1Q6ICB0 168 aa17.47■□□□□ 0.39
GNE-201ENST00000377902 PTOV1Q86YD1 416 aa17.47■□□□□ 0.39
GNE-201ENST00000377902 ZZZ3Q8IYH5 903 aa17.47■□□□□ 0.39
GNE-201ENST00000377902 SLC38A4Q969I6 547 aa17.47■□□□□ 0.39
GNE-201ENST00000377902 SIGLEC11Q96RL6 698 aa17.47■□□□□ 0.39
GNE-201ENST00000377902 REXO4Q9GZR2 422 aaKnown RBP17.47■□□□□ 0.39
GNE-201ENST00000377902 METTL15A6NJ78 407 aa17.47■□□□□ 0.39
GNE-201ENST00000377902 CLDN24A6NM45 220 aa17.47■□□□□ 0.39
GNE-201ENST00000377902 CLDN11O75508 207 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms