RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 SATL1Q86VE3 508 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 CMTR2Q8IYT2 770 aaKnown RBP13.29□□□□□ -0.28
GPC6-201ENST00000377047 FAR1Q8WVX9 515 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 ZNF347Q96SE7 839 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 METTL7AQ9H8H3 244 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 RPL26L1Q9UNX3 145 aaKnown RBP13.29□□□□□ -0.28
GPC6-201ENST00000377047 LOC110117498-PIK3R3F6TDL0 507 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 PLK4O00444 970 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 PREPP48147 710 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 RAB25P57735 213 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 XIAPP98170 497 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 ELOCQ15369 112 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 C14orf80Q86SX3 495 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 CROCCP3Q8IVE0 287 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 METTL27Q8N6F8 245 aaPredicted RBP13.29□□□□□ -0.28
GPC6-201ENST00000377047 S100ZQ8WXG8 99 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 NKD1Q969G9 470 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 TEPSINQ96N21 525 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 COL21A1Q96P44 957 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 A0A1W2PP55 124 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 HEPACAM2A8MVW5 462 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 H0YGN5 161 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 SLC30A4O14863 429 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 GSTT1P30711 240 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 ARHGDIBP52566 201 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 INCA1Q0VD86 236 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 DCTN2Q13561 401 aaKnown RBP13.29□□□□□ -0.28
GPC6-201ENST00000377047 ERN2Q76MJ5 926 aaKnown RBP13.29□□□□□ -0.28
GPC6-201ENST00000377047 SVOPLQ8N434 492 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 DENND1AQ8TEH3 1009 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 WDR60Q8WVS4 1066 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 CRELD1Q96HD1 420 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 FZD4Q9ULV1 537 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 CFL2Q9Y281 166 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 LAMTOR5O43504 91 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 LDB2O43679 373 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 IL12AP29459 219 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 OGDHQ02218 1023 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 GALNT2Q10471 571 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 SUSD1Q6UWL2 747 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 CAND1Q86VP6 1230 aaKnown RBP13.29□□□□□ -0.28
GPC6-201ENST00000377047 CBR4Q8N4T8 237 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 LRRC17Q8N6Y2 441 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 RASGEF1AQ8N9B8 481 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 FARSBQ9NSD9 589 aaKnown RBP13.29□□□□□ -0.28
GPC6-201ENST00000377047 C19orf25Q9UFG5 118 aaPredicted RBP13.29□□□□□ -0.28
GPC6-201ENST00000377047 HEXBP07686 556 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 C8orf89P0DMQ9 161 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 HTRA3P83110 453 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 MADCAM1Q13477 382 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 GOLGA7Q7Z5G4 137 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 SLCO6A1Q86UG4 719 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 ZZZ3Q8IYH5 903 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 SLC5A11Q8WWX8 675 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 KIAA1143Q96AT1 154 aaPredicted RBP13.28□□□□□ -0.28
GPC6-201ENST00000377047 COQ8BQ96D53 544 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 OTUB2Q96DC9 234 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 A8MT66 165 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 HNRNPA1P09651 372 aaKnown RBP eCLIP13.28□□□□□ -0.28
GPC6-201ENST00000377047 ITGA3P26006 1051 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 RPS21P63220 83 aaKnown RBP13.28□□□□□ -0.28
GPC6-201ENST00000377047 CRELD2Q6UXH1 353 aaPredicted RBP13.28□□□□□ -0.28
GPC6-201ENST00000377047 PMM1Q92871 262 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 TUBGCP5Q96RT8 1024 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 TRIM2Q9C040 744 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 NOX1Q9Y5S8 564 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.28□□□□□ -0.28
GPC6-201ENST00000377047 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.28□□□□□ -0.28
GPC6-201ENST00000377047 A0A1W2PQ72 361 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 CPNE3O75131 537 aaKnown RBP13.28□□□□□ -0.28
GPC6-201ENST00000377047 LMAN2Q12907 356 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 SEMA3AQ14563 771 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 SMG8Q8ND04 991 aaKnown RBP13.28□□□□□ -0.28
GPC6-201ENST00000377047 CENPNQ96H22 339 aaPredicted RBP13.28□□□□□ -0.28
GPC6-201ENST00000377047 NPY6RQ99463 290 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 GPR174Q9BXC1 333 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 SDHAF3Q9NRP4 125 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 OXSMQ9NWU1 459 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 THUMPD1Q9NXG2 353 aaKnown RBP13.28□□□□□ -0.28
GPC6-201ENST00000377047 NKIRAS2Q9NYR9 191 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 PCDHB3Q9Y5E6 796 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 CXorf49A8MYA2 514 aaPredicted RBP13.28□□□□□ -0.28
GPC6-201ENST00000377047 LOC730098B7Z3J9 87 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 NOBOXO60393 691 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 PAK4O96013 591 aaPredicted RBP13.28□□□□□ -0.28
GPC6-201ENST00000377047 OAS1P00973 400 aaKnown RBP13.28□□□□□ -0.28
GPC6-201ENST00000377047 PSMA1P25786 263 aaKnown RBP13.28□□□□□ -0.28
GPC6-201ENST00000377047 GDF5P43026 501 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 STK19P49842 368 aaPredicted RBP13.28□□□□□ -0.28
GPC6-201ENST00000377047 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.28□□□□□ -0.28
GPC6-201ENST00000377047 ZNF805Q5CZA5 627 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 MCFD2Q8NI22 146 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 MR1Q95460 341 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 ADAM7Q9H2U9 754 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 GPR32O75388 356 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 AGR2O95994 175 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 TMEM115Q12893 351 aaPredicted RBP13.28□□□□□ -0.28
GPC6-201ENST00000377047 OR4F3Q6IEY1 312 aa13.28□□□□□ -0.28
GPC6-201ENST00000377047 FBXO46Q6PJ61 603 aaPredicted RBP13.28□□□□□ -0.28
GPC6-201ENST00000377047 OR9A1PQ8NGU1 263 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms