RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 BFSP1Q12934 665 aa1.92□□□□□ -2.1
VPS13A-206ENST00000376646 MPP7Q5T2T1 576 aa1.92□□□□□ -2.1
VPS13A-206ENST00000376646 SPINK14Q6IE38 97 aa1.92□□□□□ -2.1
VPS13A-206ENST00000376646 MFSD12Q6NUT3 480 aa1.92□□□□□ -2.1
VPS13A-206ENST00000376646 ARHGAP22Q7Z5H3 698 aa1.92□□□□□ -2.1
VPS13A-206ENST00000376646 FAM219AQ8IW50 185 aa1.92□□□□□ -2.1
VPS13A-206ENST00000376646 ANKRD13CQ8N6S4 541 aa1.92□□□□□ -2.1
VPS13A-206ENST00000376646 ZNF614Q8N883 585 aa1.92□□□□□ -2.1
VPS13A-206ENST00000376646 MRGPRDQ8TDS7 321 aa1.92□□□□□ -2.1
VPS13A-206ENST00000376646 KCNE4Q8WWG9 221 aa1.92□□□□□ -2.1
VPS13A-206ENST00000376646 ATL1Q8WXF7 558 aa1.92□□□□□ -2.1
VPS13A-206ENST00000376646 GIMAP5Q96F15 307 aa1.92□□□□□ -2.1
VPS13A-206ENST00000376646 SPAG5Q96R06 1193 aa1.92□□□□□ -2.1
VPS13A-206ENST00000376646 FEVQ99581 238 aa1.92□□□□□ -2.1
VPS13A-206ENST00000376646 CPNE1Q99829 537 aa1.92□□□□□ -2.1
VPS13A-206ENST00000376646 CITED2Q99967 270 aaPredicted RBP1.92□□□□□ -2.1
VPS13A-206ENST00000376646 FERMT1Q9BQL6 677 aa1.92□□□□□ -2.1
VPS13A-206ENST00000376646 BTBD10Q9BSF8 475 aa1.92□□□□□ -2.1
VPS13A-206ENST00000376646 FZD8Q9H461 694 aa1.92□□□□□ -2.1
VPS13A-206ENST00000376646 Q9N2K0 584 aa1.92□□□□□ -2.1
VPS13A-206ENST00000376646 A4GALTQ9NPC4 353 aa1.92□□□□□ -2.1
VPS13A-206ENST00000376646 B3GAT1Q9P2W7 334 aa1.92□□□□□ -2.1
VPS13A-206ENST00000376646 LRWD1Q9UFC0 647 aa1.92□□□□□ -2.1
VPS13A-206ENST00000376646 CPSF3Q9UKF6 684 aaKnown RBP1.92□□□□□ -2.1
VPS13A-206ENST00000376646 ABT1Q9ULW3 272 aaKnown RBP1.92□□□□□ -2.1
VPS13A-206ENST00000376646 IGHV4-4A0A075B6R2 117 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 IGHV4-61A0A0C4DH41 118 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 ANXA2P2A6NMY6 339 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 PI15O43692 258 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 TGDSO95455 350 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 IGHV4-59P01825 116 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 FAM157CP0CG43 387 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 MUTP22033 750 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 GATA2P23769 480 aaPredicted RBP1.91□□□□□ -2.1
VPS13A-206ENST00000376646 EEF1B2P24534 225 aaKnown RBP1.91□□□□□ -2.1
VPS13A-206ENST00000376646 NOVP48745 357 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 LIMK1P53667 647 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 UBASH3AP57075 661 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 RPS18P62269 152 aaKnown RBP1.91□□□□□ -2.1
VPS13A-206ENST00000376646 CDR2Q01850 454 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 LGALS3BPQ08380 585 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 PHLDA2Q53GA4 152 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 SYT14P1Q58G82 188 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 NUP54Q7Z3B4 507 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 SPATA21Q7Z572 469 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 TLK2Q86UE8 772 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 CFAP206Q8IYR0 622 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 MAML2Q8IZL2 1156 aaPredicted RBP1.91□□□□□ -2.1
VPS13A-206ENST00000376646 LYG1Q8N1E2 194 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 CPSF7Q8N684 471 aaKnown RBP1.91□□□□□ -2.1
VPS13A-206ENST00000376646 OR13J1Q8NGT2 312 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 OR4C3Q8NH37 302 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 SSMEM1Q8WWF3 244 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 MUS81Q96NY9 551 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 LRRC3BQ96PB8 259 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 MYADMQ96S97 322 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 PKP2Q99959 881 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 VN1R1Q9GZP7 353 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 SERINC1Q9NRX5 453 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 TBC1D7Q9P0N9 293 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 DNAJB9Q9UBS3 223 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 POLLQ9UGP5 575 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 SLC7A7Q9UM01 511 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 NEMP2A6NFY4 417 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 H0Y626 953 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 CLDN4O14493 209 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 WDR46O15213 610 aaKnown RBP1.91□□□□□ -2.1
VPS13A-206ENST00000376646 AP5Z1O43299 807 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 SLU7O95391 586 aaKnown RBP1.91□□□□□ -2.1
VPS13A-206ENST00000376646 WDPCPO95876 746 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 IGHV2-70P01814 119 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 GBAP04062 536 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 HSP90AB1P08238 724 aaKnown RBP1.91□□□□□ -2.1
VPS13A-206ENST00000376646 TCF4P15884 667 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 GATA1P15976 413 aaPredicted RBP1.91□□□□□ -2.1
VPS13A-206ENST00000376646 TYMPP19971 482 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 CD22P20273 847 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 JAK1P23458 1154 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 CTNNA1P35221 906 aaKnown RBP1.91□□□□□ -2.1
VPS13A-206ENST00000376646 LHX1P48742 406 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 ASCL1P50553 236 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 TCTE1Q5JU00 501 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 C6orf136Q5SQH8 315 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 PRR27Q6MZM9 219 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 DOK6Q6PKX4 331 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 SPATA19Q7Z5L4 167 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 GPALPP1Q8IXQ4 340 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 SIX6OS1Q8N1H7 587 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 ZNF611Q8N823 705 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 OR1J1Q8NGS3 322 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 FGFBP3Q8TAT2 258 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 EXOC4Q96A65 974 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 MOB3AQ96BX8 217 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 RMDN2Q96LZ7 410 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 ZNF300Q96RE9 604 aaPredicted RBP1.91□□□□□ -2.1
VPS13A-206ENST00000376646 FNBP1Q96RU3 617 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 INTS14Q96SY0 518 aa1.91□□□□□ -2.1
VPS13A-206ENST00000376646 RBM4BQ9BQ04 359 aaKnown RBP1.91□□□□□ -2.1
VPS13A-206ENST00000376646 FRMD4AQ9P2Q2 1039 aaPredicted RBP1.91□□□□□ -2.1
VPS13A-206ENST00000376646 MTUS1Q9ULD2 1270 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms