RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 TMEM179BQ7Z7N9 219 aa14□□□□□ -0.17
TNFRSF1B-201ENST00000376259 DSG4Q86SJ6 1040 aa14□□□□□ -0.17
TNFRSF1B-201ENST00000376259 DCP2Q8IU60 420 aaKnown RBP14□□□□□ -0.17
TNFRSF1B-201ENST00000376259 ZNF420Q8TAQ5 688 aaPredicted RBP14□□□□□ -0.17
TNFRSF1B-201ENST00000376259 ZIC5Q96T25 663 aa14□□□□□ -0.17
TNFRSF1B-201ENST00000376259 SLC6A13Q9NSD5 602 aa14□□□□□ -0.17
TNFRSF1B-201ENST00000376259 MALT1Q9UDY8 824 aa14□□□□□ -0.17
TNFRSF1B-201ENST00000376259 RPS6KA6Q9UK32 745 aa14□□□□□ -0.17
TNFRSF1B-201ENST00000376259 SLC13A4Q9UKG4 626 aa14□□□□□ -0.17
TNFRSF1B-201ENST00000376259 TSC22D2O75157 780 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 SLC16A1P53985 500 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 DEFA1P59665 94 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 DEFA3P59666 94 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 ADAM17P78536 824 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 TOP3AQ13472 1001 aaPredicted RBP13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 CTU2Q2VPK5 515 aaKnown RBP13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 ATP13A5Q4VNC0 1218 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 DNAJB7Q7Z6W7 309 aaPredicted RBP13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 SCML4Q8N228 414 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 WDR36Q8NI36 951 aaKnown RBP13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 SORCS1Q8WY21 1168 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 KAT8Q9H7Z6 458 aaKnown RBP13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 DNAJC11Q9NVH1 559 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 CFAP20Q9Y6A4 193 aaKnown RBP13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 ZNF831Q5JPB2 1677 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 OR7A17O14581 309 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 IDUAP35475 653 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 GPR17Q13304 367 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 TIGD6Q17RP2 521 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 USP41Q3LFD5 358 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 DGKKQ5KSL6 1271 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 RBM48Q5RL73 367 aaKnown RBP13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 Q6ZVL8 140 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 CEP68Q76N32 757 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 NLGN4XQ8N0W4 816 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 AADATQ8N5Z0 425 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 AMER2Q8N7J2 671 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 Q8N9G6 341 aaPredicted RBP13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 ABCD2Q9UBJ2 740 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 ARID2Q68CP9 1835 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 ILVBLA1L0T0 632 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 EFCAB10A6NFE3 127 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 M0QX08 132 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 OR10H3O60404 316 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 PTGER1P34995 402 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 RPP38P78345 283 aaKnown RBP13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 CDK5R2Q13319 367 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 DSC3Q14574 896 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 SNX20Q7Z614 316 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 SPRED1Q7Z699 444 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 LGALS12Q96DT0 336 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 Q96MT0 163 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 ZNF641Q96N77 438 aaPredicted RBP13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 WDR12Q9GZL7 423 aaKnown RBP13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 OR51B5Q9H339 312 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 TPT1P8Q9HAU6 139 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 KCTD5Q9NXV2 234 aa13.99□□□□□ -0.17
TNFRSF1B-201ENST00000376259 A0A1W2PRU2 124 aa13.98□□□□□ -0.17
TNFRSF1B-201ENST00000376259 TAF4O00268 1085 aa13.98□□□□□ -0.17
TNFRSF1B-201ENST00000376259 ELAVL2Q12926 359 aaKnown RBP13.98□□□□□ -0.17
TNFRSF1B-201ENST00000376259 TTC23LQ6PF05 361 aa13.98□□□□□ -0.17
TNFRSF1B-201ENST00000376259 TRAF7Q6Q0C0 670 aa13.98□□□□□ -0.17
TNFRSF1B-201ENST00000376259 OR9Q1Q8NGQ5 310 aa13.98□□□□□ -0.17
TNFRSF1B-201ENST00000376259 HDAC2Q92769 488 aaKnown RBP13.98□□□□□ -0.17
TNFRSF1B-201ENST00000376259 MGME1Q9BQP7 344 aa13.98□□□□□ -0.17
TNFRSF1B-201ENST00000376259 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.98□□□□□ -0.17
TNFRSF1B-201ENST00000376259 ZBTB20Q9HC78 741 aaPredicted RBP13.98□□□□□ -0.17
TNFRSF1B-201ENST00000376259 TRIM39Q9HCM9 518 aa13.98□□□□□ -0.17
TNFRSF1B-201ENST00000376259 ELOVL2Q9NXB9 296 aa13.98□□□□□ -0.17
TNFRSF1B-201ENST00000376259 IL17CQ9P0M4 197 aa13.98□□□□□ -0.17
TNFRSF1B-201ENST00000376259 TMCC3Q9ULS5 477 aa13.98□□□□□ -0.17
TNFRSF1B-201ENST00000376259 LZTS3O60299 673 aaPredicted RBP13.98□□□□□ -0.17
TNFRSF1B-201ENST00000376259 IGLV3-25P01717 112 aa13.98□□□□□ -0.17
TNFRSF1B-201ENST00000376259 STSP08842 583 aa13.98□□□□□ -0.17
TNFRSF1B-201ENST00000376259 BPIP17213 487 aa13.98□□□□□ -0.17
TNFRSF1B-201ENST00000376259 BDKRB1P46663 353 aa13.98□□□□□ -0.17
TNFRSF1B-201ENST00000376259 COPZ1P61923 177 aa13.98□□□□□ -0.17
TNFRSF1B-201ENST00000376259 RPS26P62854 115 aaKnown RBP13.98□□□□□ -0.17
TNFRSF1B-201ENST00000376259 BTG3Q14201 252 aaPredicted RBP13.98□□□□□ -0.17
TNFRSF1B-201ENST00000376259 PCBP2Q15366 365 aaKnown RBP eCLIP13.98□□□□□ -0.17
TNFRSF1B-201ENST00000376259 FRG2Q64ET8 278 aa13.98□□□□□ -0.17
TNFRSF1B-201ENST00000376259 DLEU7Q6UYE1 221 aa13.98□□□□□ -0.17
TNFRSF1B-201ENST00000376259 PTCHD4Q6ZW05 846 aa13.98□□□□□ -0.17
TNFRSF1B-201ENST00000376259 NANOGNBQ7Z5D8 188 aa13.98□□□□□ -0.17
TNFRSF1B-201ENST00000376259 RTN4RL1Q86UN2 441 aaPredicted RBP13.98□□□□□ -0.17
TNFRSF1B-201ENST00000376259 HJURPQ8NCD3 748 aaPredicted RBP13.98□□□□□ -0.17
TNFRSF1B-201ENST00000376259 FRG2BQ96QU4 278 aa13.98□□□□□ -0.17
TNFRSF1B-201ENST00000376259 HEPHQ9BQS7 1158 aa13.98□□□□□ -0.17
TNFRSF1B-201ENST00000376259 DUSP26Q9BV47 211 aa13.98□□□□□ -0.17
TNFRSF1B-201ENST00000376259 BEX2Q9BXY8 128 aa13.98□□□□□ -0.17
TNFRSF1B-201ENST00000376259 GPBP1L1Q9HC44 474 aaPredicted RBP13.98□□□□□ -0.17
TNFRSF1B-201ENST00000376259 LOC110117498-PIK3R3F6TDL0 507 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 DLGAP1O14490 977 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 CACNG3O60359 315 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 UGT2B11O75310 529 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 PRLP01236 227 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 C1QCP02747 245 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 TMBIM6P55061 237 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 ARF5P84085 180 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms